RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 NREPQ16612 68 aa10.58□□□□□ -0.72
CPSF4-201ENST00000292476 FUSP35637 526 aaKnown RBP eCLIP10.57□□□□□ -0.72
CPSF4-201ENST00000292476 DPH3Q96FX2 82 aa10.57□□□□□ -0.72
CPSF4-201ENST00000292476 HECTD4Q9Y4D8 3996 aa10.57□□□□□ -0.72
CPSF4-201ENST00000292476 DEFB105AQ8NG35 78 aa10.57□□□□□ -0.72
CPSF4-201ENST00000292476 A0A1B0GVY2 172 aa10.56□□□□□ -0.72
CPSF4-201ENST00000292476 A0A1W2PNN7 141 aa10.56□□□□□ -0.72
CPSF4-201ENST00000292476 REG3GQ6UW15 175 aa10.55□□□□□ -0.72
CPSF4-201ENST00000292476 CHTF8P0CG12 524 aa10.54□□□□□ -0.72
CPSF4-201ENST00000292476 SPACA4Q8TDM5 124 aa10.54□□□□□ -0.72
CPSF4-201ENST00000292476 KLKP1Q107X0 134 aa10.53□□□□□ -0.72
CPSF4-201ENST00000292476 BPY2O14599 106 aa10.52□□□□□ -0.73
CPSF4-201ENST00000292476 IGKV4-1P06312 121 aa10.52□□□□□ -0.73
CPSF4-201ENST00000292476 C1orf137Q5JT78 98 aa10.52□□□□□ -0.73
CPSF4-201ENST00000292476 SCXQ7RTU7 201 aa10.52□□□□□ -0.73
CPSF4-201ENST00000292476 C20orf197Q8N268 126 aa10.52□□□□□ -0.73
CPSF4-201ENST00000292476 Q8NBF4 154 aa10.52□□□□□ -0.73
CPSF4-201ENST00000292476 SPRR4Q96PI1 79 aa10.52□□□□□ -0.73
CPSF4-201ENST00000292476 PKD1P98161 4303 aa10.52□□□□□ -0.73
CPSF4-201ENST00000292476 ERC2-IT1O76042 136 aa10.51□□□□□ -0.73
CPSF4-201ENST00000292476 UBE2BP63146 152 aa10.51□□□□□ -0.73
CPSF4-201ENST00000292476 EPM2AB3EWF7 344 aa10.5□□□□□ -0.73
CPSF4-201ENST00000292476 A0A1W2PNM2 257 aa10.5□□□□□ -0.73
CPSF4-201ENST00000292476 PKHD1P08F94 4074 aa10.49□□□□□ -0.73
CPSF4-201ENST00000292476 ST20-AS1Q8NBB2 130 aa10.49□□□□□ -0.73
CPSF4-201ENST00000292476 SVIPQ8NHG7 77 aa10.49□□□□□ -0.73
CPSF4-201ENST00000292476 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.48□□□□□ -0.73
CPSF4-201ENST00000292476 DNAH11Q96DT5 4516 aa10.47□□□□□ -0.73
CPSF4-201ENST00000292476 NDUFC1O43677 76 aa10.47□□□□□ -0.73
CPSF4-201ENST00000292476 PHF5AQ7RTV0 110 aaKnown RBP10.47□□□□□ -0.73
CPSF4-201ENST00000292476 PANO1I0J062 215 aa10.45□□□□□ -0.74
CPSF4-201ENST00000292476 PLAC8Q9NZF1 115 aa10.45□□□□□ -0.74
CPSF4-201ENST00000292476 F8WEM9 126 aa10.44□□□□□ -0.74
CPSF4-201ENST00000292476 H7BZZ5 65 aa10.44□□□□□ -0.74
CPSF4-201ENST00000292476 SMIM29Q86T20 159 aa10.44□□□□□ -0.74
CPSF4-201ENST00000292476 IGLV8-61A0A075B6I0 122 aa10.44□□□□□ -0.74
CPSF4-201ENST00000292476 H0Y9J4 135 aa10.43□□□□□ -0.74
CPSF4-201ENST00000292476 DYNC1H1Q14204 4646 aaKnown RBP10.43□□□□□ -0.74
CPSF4-201ENST00000292476 FAM236DA0A1B0GTK5 79 aa10.42□□□□□ -0.74
CPSF4-201ENST00000292476 FAM236CP0DP71 79 aa10.42□□□□□ -0.74
CPSF4-201ENST00000292476 KRTAP10-2P60368 255 aa10.41□□□□□ -0.74
CPSF4-201ENST00000292476 Q8N9L7 120 aa10.41□□□□□ -0.74
CPSF4-201ENST00000292476 OCR1Q9BZK8 76 aa10.41□□□□□ -0.74
CPSF4-201ENST00000292476 ATP5EP56381 51 aaPredicted RBP10.39□□□□□ -0.75
CPSF4-201ENST00000292476 UBE2AP49459 152 aa10.37□□□□□ -0.75
CPSF4-201ENST00000292476 SPRR1BP22528 89 aa10.36□□□□□ -0.75
CPSF4-201ENST00000292476 TMEM254Q8TBM7 123 aa10.36□□□□□ -0.75
CPSF4-201ENST00000292476 PRLHP81277 87 aa10.34□□□□□ -0.75
CPSF4-201ENST00000292476 IGFL1Q6UW32 110 aa10.34□□□□□ -0.75
CPSF4-201ENST00000292476 SNURFQ9Y675 71 aa10.34□□□□□ -0.75
CPSF4-201ENST00000292476 SERP1Q9Y6X1 66 aa10.34□□□□□ -0.75
CPSF4-201ENST00000292476 DNAH5Q8TE73 4624 aa10.34□□□□□ -0.75
CPSF4-201ENST00000292476 KIAA1109Q2LD37 5005 aa10.34□□□□□ -0.75
CPSF4-201ENST00000292476 Q6ZSA8 131 aa10.34□□□□□ -0.75
CPSF4-201ENST00000292476 KRTAP11-1Q8IUC1 163 aa10.33□□□□□ -0.76
CPSF4-201ENST00000292476 LRP1BQ9NZR2 4599 aa10.33□□□□□ -0.76
CPSF4-201ENST00000292476 DSCR10P59022 87 aa10.32□□□□□ -0.76
CPSF4-201ENST00000292476 HIGD2AQ9BW72 106 aa10.32□□□□□ -0.76
CPSF4-201ENST00000292476 A0A0U1RQV1 116 aa10.31□□□□□ -0.76
CPSF4-201ENST00000292476 OXTP01178 125 aa10.31□□□□□ -0.76
CPSF4-201ENST00000292476 KRTAP10-1P60331 282 aa10.3□□□□□ -0.76
CPSF4-201ENST00000292476 CIRBP-AS1Q8TBR5 109 aa10.29□□□□□ -0.76
CPSF4-201ENST00000292476 PSORS1C2Q9UIG4 136 aa10.28□□□□□ -0.76
CPSF4-201ENST00000292476 FAM30AQ9NZY2 134 aa10.28□□□□□ -0.76
CPSF4-201ENST00000292476 KRTAP13-1Q8IUC0 172 aa10.27□□□□□ -0.77
CPSF4-201ENST00000292476 HERC2O95714 4834 aa10.27□□□□□ -0.77
CPSF4-201ENST00000292476 K7EQZ3 153 aa10.25□□□□□ -0.77
CPSF4-201ENST00000292476 HCG22E2RYF7 251 aa10.24□□□□□ -0.77
CPSF4-201ENST00000292476 ZNF706Q9Y5V0 76 aaPredicted RBP10.24□□□□□ -0.77
CPSF4-201ENST00000292476 RYR1P21817 5038 aa10.24□□□□□ -0.77
CPSF4-201ENST00000292476 ZNF861PO60384 105 aa10.23□□□□□ -0.77
CPSF4-201ENST00000292476 APOBP04114 4563 aaKnown RBP10.23□□□□□ -0.77
CPSF4-201ENST00000292476 A0A087WSZ3 146 aa10.22□□□□□ -0.77
CPSF4-201ENST00000292476 CDK2AP2O75956 126 aa10.22□□□□□ -0.77
CPSF4-201ENST00000292476 HSPG2P98160 4391 aa10.21□□□□□ -0.78
CPSF4-201ENST00000292476 IGLV7-43P04211 117 aa10.19□□□□□ -0.78
CPSF4-201ENST00000292476 C5orf47Q569G3 176 aa10.19□□□□□ -0.78
CPSF4-201ENST00000292476 Q5XG85 94 aa10.18□□□□□ -0.78
CPSF4-201ENST00000292476 A0A0G2JQZ4 141 aa10.17□□□□□ -0.78
CPSF4-201ENST00000292476 SMIM26A0A096LP01 95 aa10.15□□□□□ -0.78
CPSF4-201ENST00000292476 RPL37AP61513 92 aaKnown RBP10.15□□□□□ -0.78
CPSF4-201ENST00000292476 ZCCHC13Q8WW36 166 aaKnown RBP10.15□□□□□ -0.78
CPSF4-201ENST00000292476 KRTAP17-1Q9BYP8 105 aa10.15□□□□□ -0.78
CPSF4-201ENST00000292476 LINC00472Q9H8W2 130 aa10.13□□□□□ -0.79
CPSF4-201ENST00000292476 A8MWP4 228 aa10.12□□□□□ -0.79
CPSF4-201ENST00000292476 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
CPSF4-201ENST00000292476 LINC00483Q53H64 154 aa10.12□□□□□ -0.79
CPSF4-201ENST00000292476 PRR15Q8IV56 129 aa10.12□□□□□ -0.79
CPSF4-201ENST00000292476 KRTAP4-5Q9BYR2 181 aa10.1□□□□□ -0.79
CPSF4-201ENST00000292476 DNAH8Q96JB1 4490 aa10.1□□□□□ -0.79
CPSF4-201ENST00000292476 DEFB116Q30KQ4 102 aa10.08□□□□□ -0.8
CPSF4-201ENST00000292476 Q8N1X5 172 aa10.08□□□□□ -0.8
CPSF4-201ENST00000292476 H3BPC8 53 aa10.07□□□□□ -0.8
CPSF4-201ENST00000292476 SMR3BP02814 79 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-201ENST00000292476 NDUFB1O75438 58 aa10.06□□□□□ -0.8
CPSF4-201ENST00000292476 C4orf26Q17RF5 130 aa10.06□□□□□ -0.8
CPSF4-201ENST00000292476 MP68P56378 58 aa10.06□□□□□ -0.8
CPSF4-201ENST00000292476 CASC2Q6XLA1 102 aa10.06□□□□□ -0.8
CPSF4-201ENST00000292476 WFDC13Q8IUB5 93 aa10.06□□□□□ -0.8
CPSF4-201ENST00000292476 FP248Q71RG6 208 aaPredicted RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms