RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 LCE6AA0A183 80 aa11.65□□□□□ -0.54
VBP1-201ENST00000286428 ZNF861PO60384 105 aa11.65□□□□□ -0.54
VBP1-201ENST00000286428 HAMPP81172 84 aa11.65□□□□□ -0.55
VBP1-201ENST00000286428 SPRR4Q96PI1 79 aa11.65□□□□□ -0.55
VBP1-201ENST00000286428 TGP01266 2768 aa11.62□□□□□ -0.55
VBP1-201ENST00000286428 A0A1W2PNM2 257 aa11.62□□□□□ -0.55
VBP1-201ENST00000286428 Q6ZSA8 131 aa11.62□□□□□ -0.55
VBP1-201ENST00000286428 CRYGAP11844 174 aa11.61□□□□□ -0.55
VBP1-201ENST00000286428 HIST1H4AP62805 103 aaKnown RBP11.61□□□□□ -0.55
VBP1-201ENST00000286428 CIRBP-AS1Q8TBR5 109 aa11.61□□□□□ -0.55
VBP1-201ENST00000286428 ANAPC13Q9BS18 74 aa11.61□□□□□ -0.55
VBP1-201ENST00000286428 HECTD4Q9Y4D8 3996 aa11.6□□□□□ -0.55
VBP1-201ENST00000286428 FAM236AA0A1B0GUQ0 79 aa11.59□□□□□ -0.55
VBP1-201ENST00000286428 FAM236BA0A1B0GV22 79 aa11.59□□□□□ -0.55
VBP1-201ENST00000286428 IGFL1Q6UW32 110 aa11.59□□□□□ -0.55
VBP1-201ENST00000286428 RPL37AP61513 92 aaKnown RBP11.58□□□□□ -0.56
VBP1-201ENST00000286428 LINC00483Q53H64 154 aa11.58□□□□□ -0.56
VBP1-201ENST00000286428 FAM30AQ9NZY2 134 aa11.58□□□□□ -0.56
VBP1-201ENST00000286428 IGLV7-43P04211 117 aa11.57□□□□□ -0.56
VBP1-201ENST00000286428 KRTAP10-1P60331 282 aa11.56□□□□□ -0.56
VBP1-201ENST00000286428 SCXQ7RTU7 201 aa11.56□□□□□ -0.56
VBP1-201ENST00000286428 BPY2O14599 106 aa11.54□□□□□ -0.56
VBP1-201ENST00000286428 ATOX1O00244 68 aa11.53□□□□□ -0.56
VBP1-201ENST00000286428 FRAS1Q86XX4 4008 aa11.52□□□□□ -0.57
VBP1-201ENST00000286428 SVIPQ8NHG7 77 aa11.5□□□□□ -0.57
VBP1-201ENST00000286428 A0A087WVE0 104 aa11.48□□□□□ -0.57
VBP1-201ENST00000286428 C9orf153Q5TBE3 101 aa11.48□□□□□ -0.57
VBP1-201ENST00000286428 IGLV9-49A0A0B4J1Y8 123 aa11.46□□□□□ -0.58
VBP1-201ENST00000286428 A0A087WSZ3 146 aa11.45□□□□□ -0.58
VBP1-201ENST00000286428 HYDINQ4G0P3 5121 aa11.44□□□□□ -0.58
VBP1-201ENST00000286428 DNAH11Q96DT5 4516 aa11.41□□□□□ -0.58
VBP1-201ENST00000286428 FAT2Q9NYQ8 4349 aa11.41□□□□□ -0.58
VBP1-201ENST00000286428 A0A0G2JQZ4 141 aa11.4□□□□□ -0.58
VBP1-201ENST00000286428 SMIM20Q8N5G0 67 aa11.4□□□□□ -0.58
VBP1-201ENST00000286428 DNAH5Q8TE73 4624 aa11.39□□□□□ -0.59
VBP1-201ENST00000286428 DNAH8Q96JB1 4490 aa11.38□□□□□ -0.59
VBP1-201ENST00000286428 SS18L2Q9UHA2 77 aa11.38□□□□□ -0.59
VBP1-201ENST00000286428 MOBPQ13875 183 aa11.37□□□□□ -0.59
VBP1-201ENST00000286428 SSBP3-AS1Q7Z2R9 100 aa11.36□□□□□ -0.59
VBP1-201ENST00000286428 A0A1B0GVY2 172 aa11.36□□□□□ -0.59
VBP1-201ENST00000286428 UQCRQO14949 82 aa11.36□□□□□ -0.59
VBP1-201ENST00000286428 IGKV4-1P06312 121 aa11.36□□□□□ -0.59
VBP1-201ENST00000286428 COX7CP15954 63 aa11.35□□□□□ -0.59
VBP1-201ENST00000286428 SERP2Q8N6R1 65 aa11.35□□□□□ -0.59
VBP1-201ENST00000286428 SACSQ9NZJ4 4579 aa11.35□□□□□ -0.59
VBP1-201ENST00000286428 PKD1P98161 4303 aa11.33□□□□□ -0.59
VBP1-201ENST00000286428 J3KT08 172 aa11.33□□□□□ -0.6
VBP1-201ENST00000286428 FAM229BQ4G0N7 80 aa11.33□□□□□ -0.6
VBP1-201ENST00000286428 ANAPC11Q9NYG5 84 aa11.32□□□□□ -0.6
VBP1-201ENST00000286428 DSCR10P59022 87 aa11.31□□□□□ -0.6
VBP1-201ENST00000286428 CD164Q04900 197 aa11.3□□□□□ -0.6
VBP1-201ENST00000286428 Q8N9L7 120 aa11.3□□□□□ -0.6
VBP1-201ENST00000286428 LINC00472Q9H8W2 130 aa11.29□□□□□ -0.6
VBP1-201ENST00000286428 CCDC179H3BU77 68 aa11.27□□□□□ -0.6
VBP1-201ENST00000286428 TRAV7A0A075B6U4 112 aa11.27□□□□□ -0.61
VBP1-201ENST00000286428 SPINK6Q6UWN8 80 aa11.26□□□□□ -0.61
VBP1-201ENST00000286428 K7EQZ3 153 aa11.25□□□□□ -0.61
VBP1-201ENST00000286428 NDUFB1O75438 58 aa11.24□□□□□ -0.61
VBP1-201ENST00000286428 HRCT1Q6UXD1 115 aa11.24□□□□□ -0.61
VBP1-201ENST00000286428 A8MWP4 228 aa11.24□□□□□ -0.61
VBP1-201ENST00000286428 DEFB116Q30KQ4 102 aa11.23□□□□□ -0.61
VBP1-201ENST00000286428 HCG22E2RYF7 251 aa11.21□□□□□ -0.61
VBP1-201ENST00000286428 PRR15Q8IV56 129 aa11.2□□□□□ -0.62
VBP1-201ENST00000286428 SRRM2Q9UQ35 2752 aaKnown RBP11.18□□□□□ -0.62
VBP1-201ENST00000286428 CDK2AP2O75956 126 aa11.17□□□□□ -0.62
VBP1-201ENST00000286428 PLA2G1BP04054 148 aaKnown RBP11.16□□□□□ -0.62
VBP1-201ENST00000286428 A0A087X002 238 aa11.14□□□□□ -0.63
VBP1-201ENST00000286428 KRTAP1-4P0C5Y4 121 aa11.14□□□□□ -0.63
VBP1-201ENST00000286428 Q96NJ1 140 aa11.14□□□□□ -0.63
VBP1-201ENST00000286428 ASB16-AS1Q495Z4 193 aa11.14□□□□□ -0.63
VBP1-201ENST00000286428 LRP1BQ9NZR2 4599 aa11.12□□□□□ -0.63
VBP1-201ENST00000286428 KRTAP13-2Q52LG2 175 aa11.11□□□□□ -0.63
VBP1-201ENST00000286428 C4orf48Q5BLP8 95 aa11.11□□□□□ -0.63
VBP1-201ENST00000286428 Q5XG85 94 aa11.11□□□□□ -0.63
VBP1-201ENST00000286428 OCR1Q9BZK8 76 aa11.11□□□□□ -0.63
VBP1-201ENST00000286428 SMR3BP02814 79 aaPredicted RBP11.11□□□□□ -0.63
VBP1-201ENST00000286428 LIMD2Q9BT23 127 aa11.1□□□□□ -0.63
VBP1-201ENST00000286428 CASC2Q6XLA1 102 aa11.09□□□□□ -0.63
VBP1-201ENST00000286428 TYMSOSQ8TAI1 123 aa11.09□□□□□ -0.63
VBP1-201ENST00000286428 RYR2Q92736 4967 aa11.08□□□□□ -0.64
VBP1-201ENST00000286428 C20orf197Q8N268 126 aa11.07□□□□□ -0.64
VBP1-201ENST00000286428 WFDC13Q8IUB5 93 aa11.06□□□□□ -0.64
VBP1-201ENST00000286428 PKHD1P08F94 4074 aa11.05□□□□□ -0.64
VBP1-201ENST00000286428 A0A1B0GVX0 72 aa11.04□□□□□ -0.64
VBP1-201ENST00000286428 KRTAP29-1A8MX34 341 aaPredicted RBP11.04□□□□□ -0.64
VBP1-201ENST00000286428 VPS13BQ7Z7G8 4022 aa11.04□□□□□ -0.64
VBP1-201ENST00000286428 SPINK1P00995 79 aa11.04□□□□□ -0.64
VBP1-201ENST00000286428 KLKP1Q107X0 134 aa11.04□□□□□ -0.64
VBP1-201ENST00000286428 FAM229AH3BQW9 127 aa11.03□□□□□ -0.64
VBP1-201ENST00000286428 C5orf47Q569G3 176 aa11.02□□□□□ -0.64
VBP1-201ENST00000286428 SPAG11AQ6PDA7 123 aa11.02□□□□□ -0.64
VBP1-201ENST00000286428 hDV103S1A0JD37 113 aa11.01□□□□□ -0.65
VBP1-201ENST00000286428 NDUFC1O43677 76 aa11.01□□□□□ -0.65
VBP1-201ENST00000286428 MMP24-AS1A0A0U1RRL7 71 aa11□□□□□ -0.65
VBP1-201ENST00000286428 TMEM254Q8TBM7 123 aa11□□□□□ -0.65
VBP1-201ENST00000286428 C8orf17Q9NRJ1 99 aa11□□□□□ -0.65
VBP1-201ENST00000286428 DYNC1H1Q14204 4646 aaKnown RBP10.99□□□□□ -0.65
VBP1-201ENST00000286428 IGHV6-1A0A0B4J1U7 121 aa10.98□□□□□ -0.65
VBP1-201ENST00000286428 RPS29P62273 56 aaKnown RBP10.98□□□□□ -0.65
VBP1-201ENST00000286428 KRTAP10-4P60372 401 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 293.6 ms