RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ZNF706Q9Y5V0 76 aaPredicted RBP11.41□□□□□ -0.58
PDLIM3-202ENST00000284770 NDUFV3P56181 108 aaKnown RBP11.4□□□□□ -0.58
PDLIM3-202ENST00000284770 SPRR4Q96PI1 79 aa11.4□□□□□ -0.58
PDLIM3-202ENST00000284770 A0A1B0GV72 72 aa11.39□□□□□ -0.59
PDLIM3-202ENST00000284770 GAGE2AQ6NT46 116 aa11.39□□□□□ -0.59
PDLIM3-202ENST00000284770 K7ERU9 68 aa11.39□□□□□ -0.59
PDLIM3-202ENST00000284770 Q8N1X5 172 aa11.39□□□□□ -0.59
PDLIM3-202ENST00000284770 SPRR1BP22528 89 aa11.38□□□□□ -0.59
PDLIM3-202ENST00000284770 KRTAP17-1Q9BYP8 105 aa11.38□□□□□ -0.59
PDLIM3-202ENST00000284770 C14orf132Q9NPU4 83 aa11.38□□□□□ -0.59
PDLIM3-202ENST00000284770 SMIM29Q86T20 159 aa11.36□□□□□ -0.59
PDLIM3-202ENST00000284770 C3orf22Q8N5N4 141 aa11.36□□□□□ -0.59
PDLIM3-202ENST00000284770 J3QR89 54 aa11.36□□□□□ -0.59
PDLIM3-202ENST00000284770 LINC00483Q53H64 154 aa11.36□□□□□ -0.59
PDLIM3-202ENST00000284770 RBM3P98179 157 aaKnown RBP11.35□□□□□ -0.59
PDLIM3-202ENST00000284770 ANAPC11Q9NYG5 84 aa11.31□□□□□ -0.6
PDLIM3-202ENST00000284770 LOC110117498A0A087WWA1 95 aa11.3□□□□□ -0.6
PDLIM3-202ENST00000284770 TRBV7-4A0A0J9YYF1 115 aa11.3□□□□□ -0.6
PDLIM3-202ENST00000284770 KRTAP1-4P0C5Y4 121 aa11.28□□□□□ -0.6
PDLIM3-202ENST00000284770 Q6ZQT0 140 aa11.28□□□□□ -0.6
PDLIM3-202ENST00000284770 DSCR8Q96T75 97 aa11.28□□□□□ -0.6
PDLIM3-202ENST00000284770 BIRC6Q9NR09 4857 aa11.27□□□□□ -0.6
PDLIM3-202ENST00000284770 CCKP06307 115 aa11.26□□□□□ -0.61
PDLIM3-202ENST00000284770 FAM240AA0A1B0GVK7 77 aa11.26□□□□□ -0.61
PDLIM3-202ENST00000284770 F8WEM9 126 aa11.25□□□□□ -0.61
PDLIM3-202ENST00000284770 PDE6GP18545 87 aa11.25□□□□□ -0.61
PDLIM3-202ENST00000284770 FAM229BQ4G0N7 80 aa11.25□□□□□ -0.61
PDLIM3-202ENST00000284770 IGLV8-61A0A075B6I0 122 aa11.24□□□□□ -0.61
PDLIM3-202ENST00000284770 IGLV9-49A0A0B4J1Y8 123 aa11.22□□□□□ -0.61
PDLIM3-202ENST00000284770 A0A087X002 238 aa11.21□□□□□ -0.61
PDLIM3-202ENST00000284770 ACYP1P07311 99 aa11.2□□□□□ -0.62
PDLIM3-202ENST00000284770 CRYGAP11844 174 aa11.2□□□□□ -0.62
PDLIM3-202ENST00000284770 C9orf153Q5TBE3 101 aa11.18□□□□□ -0.62
PDLIM3-202ENST00000284770 CDIP1Q9H305 208 aa11.18□□□□□ -0.62
PDLIM3-202ENST00000284770 MOBPQ13875 183 aa11.17□□□□□ -0.62
PDLIM3-202ENST00000284770 C21orf62-AS1Q17RA5 79 aa11.17□□□□□ -0.62
PDLIM3-202ENST00000284770 KRTAP13-2Q52LG2 175 aa11.17□□□□□ -0.62
PDLIM3-202ENST00000284770 IGFL1Q6UW32 110 aa11.17□□□□□ -0.62
PDLIM3-202ENST00000284770 PKHD1L1Q86WI1 4243 aa11.17□□□□□ -0.62
PDLIM3-202ENST00000284770 Q8NBF4 154 aa11.16□□□□□ -0.62
PDLIM3-202ENST00000284770 KRTAP4-5Q9BYR2 181 aa11.16□□□□□ -0.62
PDLIM3-202ENST00000284770 A0A0G2JQZ4 141 aa11.15□□□□□ -0.62
PDLIM3-202ENST00000284770 A0A1W2PNM2 257 aa11.15□□□□□ -0.62
PDLIM3-202ENST00000284770 Q6JHZ5 121 aa11.15□□□□□ -0.62
PDLIM3-202ENST00000284770 VPS25Q9BRG1 176 aa11.15□□□□□ -0.62
PDLIM3-202ENST00000284770 LINC00846Q9NV44 126 aa11.14□□□□□ -0.63
PDLIM3-202ENST00000284770 PRR26Q8N8Z3 221 aa11.13□□□□□ -0.63
PDLIM3-202ENST00000284770 SSBP3-AS1Q7Z2R9 100 aa11.13□□□□□ -0.63
PDLIM3-202ENST00000284770 TYMSOSQ8TAI1 123 aa11.1□□□□□ -0.63
PDLIM3-202ENST00000284770 HERC2O95714 4834 aa11.08□□□□□ -0.64
PDLIM3-202ENST00000284770 A0A1B0GW54 56 aa11.07□□□□□ -0.64
PDLIM3-202ENST00000284770 Q6Q795 121 aa11.05□□□□□ -0.64
PDLIM3-202ENST00000284770 UBL5Q9BZL1 73 aa11.02□□□□□ -0.65
PDLIM3-202ENST00000284770 FLG2Q5D862 2391 aaPredicted RBP11.01□□□□□ -0.65
PDLIM3-202ENST00000284770 KRTAP10-8P60410 259 aa11.01□□□□□ -0.65
PDLIM3-202ENST00000284770 LINC00643Q86TS7 51 aa11.01□□□□□ -0.65
PDLIM3-202ENST00000284770 Q6ZVQ6 151 aa11□□□□□ -0.65
PDLIM3-202ENST00000284770 LRP1Q07954 4544 aaKnown RBP11□□□□□ -0.65
PDLIM3-202ENST00000284770 CD164Q04900 197 aa11□□□□□ -0.65
PDLIM3-202ENST00000284770 HRCT1Q6UXD1 115 aa11□□□□□ -0.65
PDLIM3-202ENST00000284770 OXTP01178 125 aa10.99□□□□□ -0.65
PDLIM3-202ENST00000284770 MT-ATP8P03928 68 aa10.98□□□□□ -0.65
PDLIM3-202ENST00000284770 TRBV7-7A0A0K0K1E9 115 aa10.98□□□□□ -0.65
PDLIM3-202ENST00000284770 A0A087WSZ3 146 aa10.97□□□□□ -0.65
PDLIM3-202ENST00000284770 LINC00304Q8N9R0 145 aa10.97□□□□□ -0.65
PDLIM3-202ENST00000284770 C4orf48Q5BLP8 95 aa10.96□□□□□ -0.65
PDLIM3-202ENST00000284770 SIGMAR1Q99720 223 aa10.96□□□□□ -0.65
PDLIM3-202ENST00000284770 FAT3Q8TDW7 4589 aa10.95□□□□□ -0.66
PDLIM3-202ENST00000284770 NREPQ16612 68 aa10.95□□□□□ -0.66
PDLIM3-202ENST00000284770 MYCBP2O75592 4640 aa10.94□□□□□ -0.66
PDLIM3-202ENST00000284770 SPAG11AQ6PDA7 123 aa10.94□□□□□ -0.66
PDLIM3-202ENST00000284770 SPINK1P00995 79 aa10.93□□□□□ -0.66
PDLIM3-202ENST00000284770 MT1HL1P0DM35 61 aa10.93□□□□□ -0.66
PDLIM3-202ENST00000284770 KRTAP29-1A8MX34 341 aaPredicted RBP10.92□□□□□ -0.66
PDLIM3-202ENST00000284770 ABCA13Q86UQ4 5058 aa10.9□□□□□ -0.66
PDLIM3-202ENST00000284770 TNXBP22105 4242 aa10.9□□□□□ -0.66
PDLIM3-202ENST00000284770 ATP5EP2Q5VTU8 51 aa10.9□□□□□ -0.67
PDLIM3-202ENST00000284770 IGKV3D-7A0A0C4DH55 119 aa10.89□□□□□ -0.67
PDLIM3-202ENST00000284770 RPS29P62273 56 aaKnown RBP10.88□□□□□ -0.67
PDLIM3-202ENST00000284770 SS18L2Q9UHA2 77 aa10.87□□□□□ -0.67
PDLIM3-202ENST00000284770 CXCL6P80162 114 aa10.86□□□□□ -0.67
PDLIM3-202ENST00000284770 Q5XG85 94 aa10.86□□□□□ -0.67
PDLIM3-202ENST00000284770 LIMD2Q9BT23 127 aa10.85□□□□□ -0.67
PDLIM3-202ENST00000284770 LINC00472Q9H8W2 130 aa10.84□□□□□ -0.67
PDLIM3-202ENST00000284770 BPY2O14599 106 aa10.83□□□□□ -0.68
PDLIM3-202ENST00000284770 IMUPQ9GZP8 106 aa10.82□□□□□ -0.68
PDLIM3-202ENST00000284770 Q96NJ1 140 aa10.81□□□□□ -0.68
PDLIM3-202ENST00000284770 ASB16-AS1Q495Z4 193 aa10.8□□□□□ -0.68
PDLIM3-202ENST00000284770 DEFB116Q30KQ4 102 aa10.8□□□□□ -0.68
PDLIM3-202ENST00000284770 DSCR10P59022 87 aa10.78□□□□□ -0.68
PDLIM3-202ENST00000284770 J3QL48 77 aa10.77□□□□□ -0.68
PDLIM3-202ENST00000284770 HIST1H4AP62805 103 aaKnown RBP10.75□□□□□ -0.69
PDLIM3-202ENST00000284770 Q8N9L7 120 aa10.75□□□□□ -0.69
PDLIM3-202ENST00000284770 DMBT1Q9UGM3 2413 aaPredicted RBP10.74□□□□□ -0.69
PDLIM3-202ENST00000284770 A0A087WVE0 104 aa10.73□□□□□ -0.69
PDLIM3-202ENST00000284770 IGKV4-1P06312 121 aa10.73□□□□□ -0.69
PDLIM3-202ENST00000284770 C1orf195Q5TG92 126 aa10.73□□□□□ -0.69
PDLIM3-202ENST00000284770 J3KT08 172 aa10.72□□□□□ -0.69
PDLIM3-202ENST00000284770 K7EQZ3 153 aa10.7□□□□□ -0.7
PDLIM3-202ENST00000284770 A8MWP4 228 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms