RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 MDFIQ99750 246 aa8.88□□□□□ -0.99
LPCAT1-201ENST00000283415 F8WDY8 70 aa8.86□□□□□ -0.99
LPCAT1-201ENST00000283415 Q8NBF4 154 aa8.86□□□□□ -0.99
LPCAT1-201ENST00000283415 V9GYY9 64 aa8.86□□□□□ -0.99
LPCAT1-201ENST00000283415 A0A1W2PNM2 257 aa8.85□□□□□ -0.99
LPCAT1-201ENST00000283415 CSMD3Q7Z407 3707 aa8.85□□□□□ -0.99
LPCAT1-201ENST00000283415 KLKP1Q107X0 134 aa8.85□□□□□ -0.99
LPCAT1-201ENST00000283415 DNAH10Q8IVF4 4471 aa8.84□□□□□ -0.99
LPCAT1-201ENST00000283415 HCG22E2RYF7 251 aa8.84□□□□□ -0.99
LPCAT1-201ENST00000283415 C14orf177Q52M58 125 aa8.83□□□□□ -1
LPCAT1-201ENST00000283415 IGLV1-50A0A075B6I6 118 aa8.82□□□□□ -1
LPCAT1-201ENST00000283415 SEC61GP60059 68 aa8.82□□□□□ -1
LPCAT1-201ENST00000283415 ANAPC11Q9NYG5 84 aa8.82□□□□□ -1
LPCAT1-201ENST00000283415 KCNQ1DNQ9H478 68 aa8.82□□□□□ -1
LPCAT1-201ENST00000283415 CASC2Q6XLA1 102 aa8.82□□□□□ -1
LPCAT1-201ENST00000283415 DNAH7Q8WXX0 4024 aa8.82□□□□□ -1
LPCAT1-201ENST00000283415 EPM2AB3EWF7 344 aa8.81□□□□□ -1
LPCAT1-201ENST00000283415 TGP01266 2768 aa8.81□□□□□ -1
LPCAT1-201ENST00000283415 ATP5EP56381 51 aaPredicted RBP8.8□□□□□ -1
LPCAT1-201ENST00000283415 BCE1O60756 84 aa8.8□□□□□ -1
LPCAT1-201ENST00000283415 TLX1NBP0CAT3 122 aa8.79□□□□□ -1
LPCAT1-201ENST00000283415 KRTAP4-16G5E9R7 235 aaPredicted RBP8.79□□□□□ -1
LPCAT1-201ENST00000283415 PLA2G2DQ9UNK4 145 aa8.79□□□□□ -1
LPCAT1-201ENST00000283415 H0Y9P7 68 aa8.79□□□□□ -1
LPCAT1-201ENST00000283415 Q5XG85 94 aa8.79□□□□□ -1
LPCAT1-201ENST00000283415 CHKB-CPT1BH3BT56 60 aa8.78□□□□□ -1
LPCAT1-201ENST00000283415 C1orf195Q5TG92 126 aa8.78□□□□□ -1
LPCAT1-201ENST00000283415 KRTAP1-5Q9BYS1 174 aa8.78□□□□□ -1
LPCAT1-201ENST00000283415 IGHV6-1A0A0B4J1U7 121 aa8.77□□□□□ -1.01
LPCAT1-201ENST00000283415 SRRM2Q9UQ35 2752 aaKnown RBP8.77□□□□□ -1.01
LPCAT1-201ENST00000283415 PRO0628Q9UI54 55 aa8.77□□□□□ -1.01
LPCAT1-201ENST00000283415 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
LPCAT1-201ENST00000283415 FAM229BQ4G0N7 80 aa8.77□□□□□ -1.01
LPCAT1-201ENST00000283415 KRTAP7-1Q8IUC3 87 aa8.76□□□□□ -1.01
LPCAT1-201ENST00000283415 RETNLBQ9BQ08 111 aa8.76□□□□□ -1.01
LPCAT1-201ENST00000283415 IGFL1Q6UW32 110 aa8.76□□□□□ -1.01
LPCAT1-201ENST00000283415 CIRBP-AS1Q8TBR5 109 aa8.76□□□□□ -1.01
LPCAT1-201ENST00000283415 C16orf90A8MZG2 172 aa8.74□□□□□ -1.01
LPCAT1-201ENST00000283415 SPRR1AP35321 89 aa8.73□□□□□ -1.01
LPCAT1-201ENST00000283415 PRR15LQ9BU68 103 aa8.73□□□□□ -1.01
LPCAT1-201ENST00000283415 NBDYA0A0U1RRE5 68 aa8.73□□□□□ -1.01
LPCAT1-201ENST00000283415 A6NED7 52 aa8.72□□□□□ -1.01
LPCAT1-201ENST00000283415 FP248Q71RG6 208 aaPredicted RBP8.72□□□□□ -1.01
LPCAT1-201ENST00000283415 C1orf64Q8NEQ6 169 aa8.72□□□□□ -1.01
LPCAT1-201ENST00000283415 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
LPCAT1-201ENST00000283415 IGLV5-52A0A0A0MRZ9 124 aa8.71□□□□□ -1.02
LPCAT1-201ENST00000283415 NUPR2A6NF83 97 aa8.7□□□□□ -1.02
LPCAT1-201ENST00000283415 TNP2Q05952 138 aa8.7□□□□□ -1.02
LPCAT1-201ENST00000283415 MOBPQ13875 183 aa8.7□□□□□ -1.02
LPCAT1-201ENST00000283415 IGLV5-48A0A075B6I7 105 aa8.7□□□□□ -1.02
LPCAT1-201ENST00000283415 A8MUN3 132 aa8.7□□□□□ -1.02
LPCAT1-201ENST00000283415 PRKDCP78527 4128 aaKnown RBP8.69□□□□□ -1.02
LPCAT1-201ENST00000283415 DSCR10P59022 87 aa8.68□□□□□ -1.02
LPCAT1-201ENST00000283415 PMAIP1Q13794 54 aa8.67□□□□□ -1.02
LPCAT1-201ENST00000283415 COL7A1Q02388 2944 aa8.64□□□□□ -1.03
LPCAT1-201ENST00000283415 APLNQ9ULZ1 77 aa8.63□□□□□ -1.03
LPCAT1-201ENST00000283415 PLECQ15149 4684 aaKnown RBP8.63□□□□□ -1.03
LPCAT1-201ENST00000283415 RTL8CO15255 209 aa8.63□□□□□ -1.03
LPCAT1-201ENST00000283415 C1orf134Q5TEV5 83 aa8.63□□□□□ -1.03
LPCAT1-201ENST00000283415 SPAG11AQ6PDA7 123 aa8.62□□□□□ -1.03
LPCAT1-201ENST00000283415 HECTD4Q9Y4D8 3996 aa8.62□□□□□ -1.03
LPCAT1-201ENST00000283415 A0A1B0GW54 56 aa8.61□□□□□ -1.03
LPCAT1-201ENST00000283415 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
LPCAT1-201ENST00000283415 hDV103S1A0JD37 113 aa8.61□□□□□ -1.03
LPCAT1-201ENST00000283415 PANO1I0J062 215 aa8.6□□□□□ -1.03
LPCAT1-201ENST00000283415 C9orf163Q8N9P6 203 aa8.6□□□□□ -1.03
LPCAT1-201ENST00000283415 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.03
LPCAT1-201ENST00000283415 VPS13DQ5THJ4 4388 aa8.58□□□□□ -1.04
LPCAT1-201ENST00000283415 SPRR4Q96PI1 79 aa8.57□□□□□ -1.04
LPCAT1-201ENST00000283415 TRAV22A0A0B4J277 110 aa8.57□□□□□ -1.04
LPCAT1-201ENST00000283415 KRTAP11-1Q8IUC1 163 aa8.56□□□□□ -1.04
LPCAT1-201ENST00000283415 LCE6AA0A183 80 aa8.56□□□□□ -1.04
LPCAT1-201ENST00000283415 C4orf48Q5BLP8 95 aa8.55□□□□□ -1.04
LPCAT1-201ENST00000283415 PRR15Q8IV56 129 aa8.55□□□□□ -1.04
LPCAT1-201ENST00000283415 A0A087WTM6 91 aa8.54□□□□□ -1.04
LPCAT1-201ENST00000283415 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
LPCAT1-201ENST00000283415 A8MWP4 228 aa8.53□□□□□ -1.04
LPCAT1-201ENST00000283415 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
LPCAT1-201ENST00000283415 STARD9Q9P2P6 4700 aa8.51□□□□□ -1.05
LPCAT1-201ENST00000283415 IGLV8-61A0A075B6I0 122 aa8.51□□□□□ -1.05
LPCAT1-201ENST00000283415 DNAH2Q9P225 4427 aa8.51□□□□□ -1.05
LPCAT1-201ENST00000283415 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
LPCAT1-201ENST00000283415 SPACA4Q8TDM5 124 aa8.49□□□□□ -1.05
LPCAT1-201ENST00000283415 ZNF706Q9Y5V0 76 aaPredicted RBP8.49□□□□□ -1.05
LPCAT1-201ENST00000283415 COA5Q86WW8 74 aa8.48□□□□□ -1.05
LPCAT1-201ENST00000283415 SPINK1P00995 79 aa8.47□□□□□ -1.05
LPCAT1-201ENST00000283415 FBN3Q75N90 2809 aa8.46□□□□□ -1.05
LPCAT1-201ENST00000283415 DNAH8Q96JB1 4490 aa8.46□□□□□ -1.05
LPCAT1-201ENST00000283415 DNAH17Q9UFH2 4485 aa8.46□□□□□ -1.06
LPCAT1-201ENST00000283415 DNAH6Q9C0G6 4158 aa8.46□□□□□ -1.06
LPCAT1-201ENST00000283415 FRAS1Q86XX4 4008 aa8.42□□□□□ -1.06
LPCAT1-201ENST00000283415 IGKV2D-30A0A075B6S6 120 aa8.42□□□□□ -1.06
LPCAT1-201ENST00000283415 IGKV2-30P06310 120 aa8.42□□□□□ -1.06
LPCAT1-201ENST00000283415 SMR3BP02814 79 aaPredicted RBP8.42□□□□□ -1.06
LPCAT1-201ENST00000283415 SPRR1BP22528 89 aa8.41□□□□□ -1.06
LPCAT1-201ENST00000283415 ZCCHC13Q8WW36 166 aaKnown RBP8.41□□□□□ -1.06
LPCAT1-201ENST00000283415 C8orf17Q9NRJ1 99 aa8.41□□□□□ -1.06
LPCAT1-201ENST00000283415 LIMD2Q9BT23 127 aa8.4□□□□□ -1.06
LPCAT1-201ENST00000283415 ALMS1Q8TCU4 4167 aa8.4□□□□□ -1.06
LPCAT1-201ENST00000283415 KMT2AQ03164 3969 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms