RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SPANXCQ9NY87 97 aa5.46□□□□□ -1.54
LRTM1-201ENST00000273286 LOC107984156A0A0G2JMH3 177 aa5.45□□□□□ -1.54
LRTM1-201ENST00000273286 NOTCH2NLQ7Z3S9 236 aa5.45□□□□□ -1.54
LRTM1-201ENST00000273286 ARL17AQ8IVW1 177 aa5.45□□□□□ -1.54
LRTM1-201ENST00000273286 DAND5Q8N907 189 aa5.45□□□□□ -1.54
LRTM1-201ENST00000273286 SPANXB1Q9NS25 103 aaPredicted RBP5.45□□□□□ -1.54
LRTM1-201ENST00000273286 NDUFC2O95298 119 aa5.44□□□□□ -1.54
LRTM1-201ENST00000273286 LINC00483Q53H64 154 aa5.44□□□□□ -1.54
LRTM1-201ENST00000273286 ADAMTSL4-AS1Q5T5F5 129 aa5.44□□□□□ -1.54
LRTM1-201ENST00000273286 SSBP3-AS1Q7Z2R9 100 aa5.44□□□□□ -1.54
LRTM1-201ENST00000273286 LINC00308Q8TCZ7 52 aa5.44□□□□□ -1.54
LRTM1-201ENST00000273286 HIGD1BQ9P298 99 aa5.44□□□□□ -1.54
LRTM1-201ENST00000273286 UQCR10Q9UDW1 63 aa5.44□□□□□ -1.54
LRTM1-201ENST00000273286 SMCR5Q8TEV8 140 aa5.43□□□□□ -1.54
LRTM1-201ENST00000273286 HIST1H4GQ99525 98 aa5.43□□□□□ -1.54
LRTM1-201ENST00000273286 TRBV10-2A0A0K0K1G8 114 aa5.42□□□□□ -1.54
LRTM1-201ENST00000273286 KRTAP4-16G5E9R7 235 aaPredicted RBP5.42□□□□□ -1.54
LRTM1-201ENST00000273286 TSTD3H0UI37 97 aa5.42□□□□□ -1.54
LRTM1-201ENST00000273286 SLC25A20O43772 301 aa5.42□□□□□ -1.54
LRTM1-201ENST00000273286 NPC2P61916 151 aa5.42□□□□□ -1.54
LRTM1-201ENST00000273286 LINC00518Q8N0U6 118 aa5.42□□□□□ -1.54
LRTM1-201ENST00000273286 C12orf57Q99622 126 aa5.42□□□□□ -1.54
LRTM1-201ENST00000273286 CBY1Q9Y3M2 126 aa5.42□□□□□ -1.54
LRTM1-201ENST00000273286 NCR3O14931 201 aa5.41□□□□□ -1.54
LRTM1-201ENST00000273286 TAL2Q16559 108 aa5.41□□□□□ -1.54
LRTM1-201ENST00000273286 TRBV10-3A0A0K0K1G6 114 aa5.4□□□□□ -1.54
LRTM1-201ENST00000273286 GAGE2AQ6NT46 116 aa5.4□□□□□ -1.54
LRTM1-201ENST00000273286 MOBPQ13875 183 aa5.4□□□□□ -1.55
LRTM1-201ENST00000273286 S100A7L2Q5SY68 101 aa5.4□□□□□ -1.55
LRTM1-201ENST00000273286 SOSTDC1Q6X4U4 206 aa5.4□□□□□ -1.55
LRTM1-201ENST00000273286 C2orf91Q6ZV80 131 aa5.4□□□□□ -1.55
LRTM1-201ENST00000273286 MUSTN1Q8IVN3 82 aa5.4□□□□□ -1.55
LRTM1-201ENST00000273286 Q8N377 158 aa5.4□□□□□ -1.55
LRTM1-201ENST00000273286 DDTP30046 118 aa5.39□□□□□ -1.55
LRTM1-201ENST00000273286 HSD52Q0P140 79 aa5.39□□□□□ -1.55
LRTM1-201ENST00000273286 Q6ZRX8 168 aa5.39□□□□□ -1.55
LRTM1-201ENST00000273286 IGLV9-49A0A0B4J1Y8 123 aa5.38□□□□□ -1.55
LRTM1-201ENST00000273286 PRO1933Q9H354 126 aa5.38□□□□□ -1.55
LRTM1-201ENST00000273286 TRAV13-2A0A0B4J235 113 aa5.37□□□□□ -1.55
LRTM1-201ENST00000273286 OR13C6PQ8NH95 151 aa5.37□□□□□ -1.55
LRTM1-201ENST00000273286 A4D1N5 150 aa5.36□□□□□ -1.55
LRTM1-201ENST00000273286 CEND1Q8N111 149 aa5.36□□□□□ -1.55
LRTM1-201ENST00000273286 A6NDN8 102 aa5.35□□□□□ -1.55
LRTM1-201ENST00000273286 IGLV6-57P01721 117 aa5.35□□□□□ -1.55
LRTM1-201ENST00000273286 HINT1P49773 126 aaPredicted RBP5.35□□□□□ -1.55
LRTM1-201ENST00000273286 Q9BRP9 147 aa5.35□□□□□ -1.55
LRTM1-201ENST00000273286 TRAV23DV6A0A075B6W5 121 aa5.34□□□□□ -1.55
LRTM1-201ENST00000273286 KRTAP16-1A8MUX0 517 aa5.34□□□□□ -1.55
LRTM1-201ENST00000273286 M0R143 59 aa5.34□□□□□ -1.55
LRTM1-201ENST00000273286 ERC2-IT1O76042 136 aa5.34□□□□□ -1.55
LRTM1-201ENST00000273286 C9orf153Q5TBE3 101 aa5.34□□□□□ -1.55
LRTM1-201ENST00000273286 RAB37Q96AX2 223 aa5.34□□□□□ -1.55
LRTM1-201ENST00000273286 LIMD2Q9BT23 127 aa5.34□□□□□ -1.55
LRTM1-201ENST00000273286 A0A0B4J2C4 111 aa5.33□□□□□ -1.56
LRTM1-201ENST00000273286 FSIP2Q5CZC0 6907 aa5.33□□□□□ -1.56
LRTM1-201ENST00000273286 ZNF73O43830 326 aaPredicted RBP5.32□□□□□ -1.56
LRTM1-201ENST00000273286 KRTAP5-9P26371 169 aa5.32□□□□□ -1.56
LRTM1-201ENST00000273286 KRTAP4-1Q9BYQ7 146 aa5.32□□□□□ -1.56
LRTM1-201ENST00000273286 NDUFAF8A1L188 74 aa5.31□□□□□ -1.56
LRTM1-201ENST00000273286 FXYD2P54710 66 aa5.31□□□□□ -1.56
LRTM1-201ENST00000273286 VAMP3Q15836 100 aa5.3□□□□□ -1.56
LRTM1-201ENST00000273286 Q1RN00 199 aa5.3□□□□□ -1.56
LRTM1-201ENST00000273286 NHP2Q9NX24 153 aaKnown RBP5.3□□□□□ -1.56
LRTM1-201ENST00000273286 DHRS4-AS1Q9P1J3 65 aa5.3□□□□□ -1.56
LRTM1-201ENST00000273286 PRO1854Q9UHT4 67 aa5.3□□□□□ -1.56
LRTM1-201ENST00000273286 TRBV7-6A0A0J9YX20 115 aa5.29□□□□□ -1.56
LRTM1-201ENST00000273286 SPRR1BP22528 89 aa5.29□□□□□ -1.56
LRTM1-201ENST00000273286 BVES-AS1Q5T3Y7 98 aa5.29□□□□□ -1.56
LRTM1-201ENST00000273286 A0A1B0GWB2 263 aa5.28□□□□□ -1.56
LRTM1-201ENST00000273286 H7C2G1 150 aa5.28□□□□□ -1.56
LRTM1-201ENST00000273286 C6orf99Q4VX62 202 aa5.28□□□□□ -1.56
LRTM1-201ENST00000273286 Q75L30 129 aa5.28□□□□□ -1.56
LRTM1-201ENST00000273286 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
LRTM1-201ENST00000273286 LAMTOR3Q9UHA4 124 aa5.28□□□□□ -1.56
LRTM1-201ENST00000273286 COX7BP24311 80 aa5.27□□□□□ -1.57
LRTM1-201ENST00000273286 DSCR10P59022 87 aa5.27□□□□□ -1.57
LRTM1-201ENST00000273286 SMIM11BQ8TCY0 68 aa5.27□□□□□ -1.57
LRTM1-201ENST00000273286 SNCGO76070 127 aa5.26□□□□□ -1.57
LRTM1-201ENST00000273286 ELOF1P60002 83 aaKnown RBP5.26□□□□□ -1.57
LRTM1-201ENST00000273286 CD164Q04900 197 aa5.26□□□□□ -1.57
LRTM1-201ENST00000273286 IGLV8-61A0A075B6I0 122 aa5.25□□□□□ -1.57
LRTM1-201ENST00000273286 COX6CP09669 75 aa5.25□□□□□ -1.57
LRTM1-201ENST00000273286 ST20-AS1Q8NBB2 130 aa5.25□□□□□ -1.57
LRTM1-201ENST00000273286 H0YGX0 51 aa5.24□□□□□ -1.57
LRTM1-201ENST00000273286 K7ERJ3 54 aa5.24□□□□□ -1.57
LRTM1-201ENST00000273286 PSMB2P49721 201 aa5.24□□□□□ -1.57
LRTM1-201ENST00000273286 BATFQ16520 125 aa5.24□□□□□ -1.57
LRTM1-201ENST00000273286 PCOTHQ58A44 107 aa5.23□□□□□ -1.57
LRTM1-201ENST00000273286 Q5XG85 94 aa5.23□□□□□ -1.57
LRTM1-201ENST00000273286 TEX49A0A1B0GTD5 131 aa5.22□□□□□ -1.57
LRTM1-201ENST00000273286 PCP4L1A6NKN8 68 aa5.22□□□□□ -1.57
LRTM1-201ENST00000273286 MT1HP80294 61 aa5.22□□□□□ -1.57
LRTM1-201ENST00000273286 KRTAP19-2Q3LHN2 52 aa5.22□□□□□ -1.57
LRTM1-201ENST00000273286 LYRM7Q5U5X0 104 aa5.22□□□□□ -1.57
LRTM1-201ENST00000273286 HRCT1Q6UXD1 115 aa5.22□□□□□ -1.57
LRTM1-201ENST00000273286 C9orf92A6NGG3 77 aa5.21□□□□□ -1.58
LRTM1-201ENST00000273286 A0A1B0GX51 115 aa5.2□□□□□ -1.58
LRTM1-201ENST00000273286 hADV29S1A0JD25 119 aa5.2□□□□□ -1.58
LRTM1-201ENST00000273286 SCGB1C2P0DMR2 95 aa5.2□□□□□ -1.58
LRTM1-201ENST00000273286 LINC00575Q6W349 94 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms