RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 HECTD4Q9Y4D8 3996 aa12.87□□□□□ -0.35
LYSMD2-201ENST00000267838 SACSQ9NZJ4 4579 aa12.85□□□□□ -0.35
LYSMD2-201ENST00000267838 C20orf197Q8N268 126 aa12.82□□□□□ -0.36
LYSMD2-201ENST00000267838 FRAS1Q86XX4 4008 aa12.82□□□□□ -0.36
LYSMD2-201ENST00000267838 KRTAP10-2P60368 255 aa12.81□□□□□ -0.36
LYSMD2-201ENST00000267838 ERC2-IT1O76042 136 aa12.81□□□□□ -0.36
LYSMD2-201ENST00000267838 PRLHP81277 87 aa12.81□□□□□ -0.36
LYSMD2-201ENST00000267838 DEFB105AQ8NG35 78 aa12.8□□□□□ -0.36
LYSMD2-201ENST00000267838 PLAC8Q9NZF1 115 aa12.79□□□□□ -0.36
LYSMD2-201ENST00000267838 Q8N377 158 aa12.79□□□□□ -0.36
LYSMD2-201ENST00000267838 LCE6AA0A183 80 aa12.78□□□□□ -0.36
LYSMD2-201ENST00000267838 A0A1B0GW54 56 aa12.78□□□□□ -0.36
LYSMD2-201ENST00000267838 ST20-AS1Q8NBB2 130 aa12.78□□□□□ -0.36
LYSMD2-201ENST00000267838 IGLV5-48A0A075B6I7 105 aa12.76□□□□□ -0.37
LYSMD2-201ENST00000267838 H0Y9J4 135 aa12.76□□□□□ -0.37
LYSMD2-201ENST00000267838 KLKP1Q107X0 134 aa12.76□□□□□ -0.37
LYSMD2-201ENST00000267838 NREPQ16612 68 aa12.76□□□□□ -0.37
LYSMD2-201ENST00000267838 SCXQ7RTU7 201 aa12.75□□□□□ -0.37
LYSMD2-201ENST00000267838 HIGD2AQ9BW72 106 aa12.74□□□□□ -0.37
LYSMD2-201ENST00000267838 FAM236DA0A1B0GTK5 79 aa12.73□□□□□ -0.37
LYSMD2-201ENST00000267838 FAM236CP0DP71 79 aa12.73□□□□□ -0.37
LYSMD2-201ENST00000267838 UBE2AP49459 152 aa12.73□□□□□ -0.37
LYSMD2-201ENST00000267838 DNAH11Q96DT5 4516 aa12.71□□□□□ -0.37
LYSMD2-201ENST00000267838 H7BZZ5 65 aa12.69□□□□□ -0.38
LYSMD2-201ENST00000267838 NDUFC1O43677 76 aa12.69□□□□□ -0.38
LYSMD2-201ENST00000267838 KMT2CQ8NEZ4 4911 aaKnown RBP12.69□□□□□ -0.38
LYSMD2-201ENST00000267838 BPY2O14599 106 aa12.69□□□□□ -0.38
LYSMD2-201ENST00000267838 IGKV4-1P06312 121 aa12.68□□□□□ -0.38
LYSMD2-201ENST00000267838 KRTAP13-1Q8IUC0 172 aa12.68□□□□□ -0.38
LYSMD2-201ENST00000267838 FAM30AQ9NZY2 134 aa12.68□□□□□ -0.38
LYSMD2-201ENST00000267838 FAT2Q9NYQ8 4349 aa12.68□□□□□ -0.38
LYSMD2-201ENST00000267838 DNAH5Q8TE73 4624 aa12.67□□□□□ -0.38
LYSMD2-201ENST00000267838 KRTAP10-1P60331 282 aa12.66□□□□□ -0.38
LYSMD2-201ENST00000267838 PSORS1C2Q9UIG4 136 aa12.66□□□□□ -0.38
LYSMD2-201ENST00000267838 RYR2Q92736 4967 aa12.65□□□□□ -0.39
LYSMD2-201ENST00000267838 PKD1P98161 4303 aa12.63□□□□□ -0.39
LYSMD2-201ENST00000267838 Q6ZSA8 131 aa12.63□□□□□ -0.39
LYSMD2-201ENST00000267838 SMIM29Q86T20 159 aa12.63□□□□□ -0.39
LYSMD2-201ENST00000267838 CIRBP-AS1Q8TBR5 109 aa12.63□□□□□ -0.39
LYSMD2-201ENST00000267838 SERP1Q9Y6X1 66 aa12.63□□□□□ -0.39
LYSMD2-201ENST00000267838 OXTP01178 125 aa12.62□□□□□ -0.39
LYSMD2-201ENST00000267838 C1orf137Q5JT78 98 aa12.62□□□□□ -0.39
LYSMD2-201ENST00000267838 LINC00336Q6ZUF6 198 aa12.62□□□□□ -0.39
LYSMD2-201ENST00000267838 Q8NBF4 154 aa12.61□□□□□ -0.39
LYSMD2-201ENST00000267838 DNAH8Q96JB1 4490 aa12.61□□□□□ -0.39
LYSMD2-201ENST00000267838 ATP5EP56381 51 aaPredicted RBP12.61□□□□□ -0.39
LYSMD2-201ENST00000267838 SNURFQ9Y675 71 aa12.61□□□□□ -0.39
LYSMD2-201ENST00000267838 A0A1W2PNM2 257 aa12.58□□□□□ -0.39
LYSMD2-201ENST00000267838 Q8N9L7 120 aa12.58□□□□□ -0.39
LYSMD2-201ENST00000267838 F8WEM9 126 aa12.58□□□□□ -0.4
LYSMD2-201ENST00000267838 SPRR1BP22528 89 aa12.58□□□□□ -0.4
LYSMD2-201ENST00000267838 SPRR4Q96PI1 79 aa12.58□□□□□ -0.4
LYSMD2-201ENST00000267838 TMEM254Q8TBM7 123 aa12.57□□□□□ -0.4
LYSMD2-201ENST00000267838 OCR1Q9BZK8 76 aa12.56□□□□□ -0.4
LYSMD2-201ENST00000267838 C5orf47Q569G3 176 aa12.54□□□□□ -0.4
LYSMD2-201ENST00000267838 ZNF861PO60384 105 aa12.53□□□□□ -0.4
LYSMD2-201ENST00000267838 IGLV8-61A0A075B6I0 122 aa12.5□□□□□ -0.41
LYSMD2-201ENST00000267838 IGLV7-43P04211 117 aa12.5□□□□□ -0.41
LYSMD2-201ENST00000267838 A0A0U1RQV1 116 aa12.48□□□□□ -0.41
LYSMD2-201ENST00000267838 Q5XG85 94 aa12.48□□□□□ -0.41
LYSMD2-201ENST00000267838 A0A1B0GVY2 172 aa12.48□□□□□ -0.41
LYSMD2-201ENST00000267838 ZNF706Q9Y5V0 76 aaPredicted RBP12.48□□□□□ -0.41
LYSMD2-201ENST00000267838 RYR3Q15413 4870 aa12.47□□□□□ -0.41
LYSMD2-201ENST00000267838 IGFL1Q6UW32 110 aa12.46□□□□□ -0.42
LYSMD2-201ENST00000267838 LINC00483Q53H64 154 aa12.45□□□□□ -0.42
LYSMD2-201ENST00000267838 SRRM2Q9UQ35 2752 aaKnown RBP12.43□□□□□ -0.42
LYSMD2-201ENST00000267838 A0A0G2JQZ4 141 aa12.42□□□□□ -0.42
LYSMD2-201ENST00000267838 SMIM26A0A096LP01 95 aa12.41□□□□□ -0.42
LYSMD2-201ENST00000267838 DSCR10P59022 87 aa12.41□□□□□ -0.42
LYSMD2-201ENST00000267838 C4orf26Q17RF5 130 aa12.39□□□□□ -0.43
LYSMD2-201ENST00000267838 K7EQZ3 153 aa12.36□□□□□ -0.43
LYSMD2-201ENST00000267838 IGLV9-49A0A0B4J1Y8 123 aa12.35□□□□□ -0.43
LYSMD2-201ENST00000267838 HCG22E2RYF7 251 aa12.34□□□□□ -0.43
LYSMD2-201ENST00000267838 HRCT1Q6UXD1 115 aa12.34□□□□□ -0.43
LYSMD2-201ENST00000267838 PKHD1P08F94 4074 aa12.33□□□□□ -0.43
LYSMD2-201ENST00000267838 ANAPC11Q9NYG5 84 aa12.33□□□□□ -0.44
LYSMD2-201ENST00000267838 LRP1BQ9NZR2 4599 aa12.32□□□□□ -0.44
LYSMD2-201ENST00000267838 RPL37AP61513 92 aaKnown RBP12.3□□□□□ -0.44
LYSMD2-201ENST00000267838 DYNC1H1Q14204 4646 aaKnown RBP12.27□□□□□ -0.44
LYSMD2-201ENST00000267838 A0A087WSZ3 146 aa12.27□□□□□ -0.45
LYSMD2-201ENST00000267838 MOBPQ13875 183 aa12.27□□□□□ -0.45
LYSMD2-201ENST00000267838 FP248Q71RG6 208 aaPredicted RBP12.25□□□□□ -0.45
LYSMD2-201ENST00000267838 ZCCHC13Q8WW36 166 aaKnown RBP12.25□□□□□ -0.45
LYSMD2-201ENST00000267838 SMR3BP02814 79 aaPredicted RBP12.19□□□□□ -0.46
LYSMD2-201ENST00000267838 NDUFB1O75438 58 aa12.17□□□□□ -0.46
LYSMD2-201ENST00000267838 DEFB116Q30KQ4 102 aa12.16□□□□□ -0.46
LYSMD2-201ENST00000267838 VPS13BQ7Z7G8 4022 aa12.16□□□□□ -0.46
LYSMD2-201ENST00000267838 MP68P56378 58 aa12.15□□□□□ -0.46
LYSMD2-201ENST00000267838 FAM229BQ4G0N7 80 aa12.15□□□□□ -0.46
LYSMD2-201ENST00000267838 WFDC13Q8IUB5 93 aa12.15□□□□□ -0.46
LYSMD2-201ENST00000267838 KRTAP29-1A8MX34 341 aaPredicted RBP12.13□□□□□ -0.47
LYSMD2-201ENST00000267838 KRTAP1-4P0C5Y4 121 aa12.13□□□□□ -0.47
LYSMD2-201ENST00000267838 SSBP3-AS1Q7Z2R9 100 aa12.13□□□□□ -0.47
LYSMD2-201ENST00000267838 PRR15Q8IV56 129 aa12.13□□□□□ -0.47
LYSMD2-201ENST00000267838 APOBP04114 4563 aaKnown RBP12.13□□□□□ -0.47
LYSMD2-201ENST00000267838 A0A087X002 238 aa12.13□□□□□ -0.47
LYSMD2-201ENST00000267838 A8MWP4 228 aa12.13□□□□□ -0.47
LYSMD2-201ENST00000267838 SPINK6Q6UWN8 80 aa12.13□□□□□ -0.47
LYSMD2-201ENST00000267838 hDV103S1A0JD37 113 aa12.11□□□□□ -0.47
LYSMD2-201ENST00000267838 H3BPC8 53 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms