RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 LINC00474Q9P2X8 69 aa10.53□□□□□ -0.72
CHKA-201ENST00000265689 FAT2Q9NYQ8 4349 aa10.53□□□□□ -0.72
CHKA-201ENST00000265689 C1orf137Q5JT78 98 aa10.53□□□□□ -0.72
CHKA-201ENST00000265689 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.52□□□□□ -0.72
CHKA-201ENST00000265689 A0A1W2PNM2 257 aa10.52□□□□□ -0.73
CHKA-201ENST00000265689 DNAH11Q96DT5 4516 aa10.51□□□□□ -0.73
CHKA-201ENST00000265689 ALMS1Q8TCU4 4167 aa10.51□□□□□ -0.73
CHKA-201ENST00000265689 CXCL6P80162 114 aa10.51□□□□□ -0.73
CHKA-201ENST00000265689 DNAH5Q8TE73 4624 aa10.51□□□□□ -0.73
CHKA-201ENST00000265689 LINC00476Q8WZB0 136 aa10.51□□□□□ -0.73
CHKA-201ENST00000265689 EPM2AB3EWF7 344 aa10.5□□□□□ -0.73
CHKA-201ENST00000265689 TMEM258P61165 79 aa10.5□□□□□ -0.73
CHKA-201ENST00000265689 PKHD1P08F94 4074 aa10.5□□□□□ -0.73
CHKA-201ENST00000265689 SPACA4Q8TDM5 124 aa10.49□□□□□ -0.73
CHKA-201ENST00000265689 NREPQ16612 68 aa10.48□□□□□ -0.73
CHKA-201ENST00000265689 C20orf197Q8N268 126 aa10.48□□□□□ -0.73
CHKA-201ENST00000265689 PKD1P98161 4303 aa10.48□□□□□ -0.73
CHKA-201ENST00000265689 A0A0G2JQZ4 141 aa10.47□□□□□ -0.73
CHKA-201ENST00000265689 RTL8CO15255 209 aa10.47□□□□□ -0.73
CHKA-201ENST00000265689 OXTP01178 125 aa10.47□□□□□ -0.73
CHKA-201ENST00000265689 DNAH8Q96JB1 4490 aa10.47□□□□□ -0.73
CHKA-201ENST00000265689 Q8NBF4 154 aa10.46□□□□□ -0.73
CHKA-201ENST00000265689 UBE2AP49459 152 aa10.46□□□□□ -0.74
CHKA-201ENST00000265689 F8WEM9 126 aa10.45□□□□□ -0.74
CHKA-201ENST00000265689 H0Y9J4 135 aa10.45□□□□□ -0.74
CHKA-201ENST00000265689 RPS28P62857 69 aaKnown RBP10.45□□□□□ -0.74
CHKA-201ENST00000265689 C1orf134Q5TEV5 83 aa10.45□□□□□ -0.74
CHKA-201ENST00000265689 Q8N9L7 120 aa10.43□□□□□ -0.74
CHKA-201ENST00000265689 BCE1O60756 84 aa10.42□□□□□ -0.74
CHKA-201ENST00000265689 IGFL1Q6UW32 110 aa10.42□□□□□ -0.74
CHKA-201ENST00000265689 SPRR4Q96PI1 79 aa10.42□□□□□ -0.74
CHKA-201ENST00000265689 A0A1B0GW54 56 aa10.4□□□□□ -0.74
CHKA-201ENST00000265689 BPY2O14599 106 aa10.4□□□□□ -0.74
CHKA-201ENST00000265689 KRTAP13-1Q8IUC0 172 aa10.39□□□□□ -0.75
CHKA-201ENST00000265689 TRAV7A0A075B6U4 112 aa10.39□□□□□ -0.75
CHKA-201ENST00000265689 RYR2Q92736 4967 aa10.39□□□□□ -0.75
CHKA-201ENST00000265689 IGLV8-61A0A075B6I0 122 aa10.38□□□□□ -0.75
CHKA-201ENST00000265689 IGLV5-52A0A0A0MRZ9 124 aa10.38□□□□□ -0.75
CHKA-201ENST00000265689 IGKV4-1P06312 121 aa10.37□□□□□ -0.75
CHKA-201ENST00000265689 SPRR1BP22528 89 aa10.37□□□□□ -0.75
CHKA-201ENST00000265689 SNURFQ9Y675 71 aa10.37□□□□□ -0.75
CHKA-201ENST00000265689 H7BZZ5 65 aa10.35□□□□□ -0.75
CHKA-201ENST00000265689 KRTAP10-2P60368 255 aa10.35□□□□□ -0.75
CHKA-201ENST00000265689 RYR3Q15413 4870 aa10.35□□□□□ -0.75
CHKA-201ENST00000265689 PLAC8Q9NZF1 115 aa10.33□□□□□ -0.76
CHKA-201ENST00000265689 FAM236DA0A1B0GTK5 79 aa10.32□□□□□ -0.76
CHKA-201ENST00000265689 FAM236CP0DP71 79 aa10.32□□□□□ -0.76
CHKA-201ENST00000265689 PSORS1C2Q9UIG4 136 aa10.32□□□□□ -0.76
CHKA-201ENST00000265689 A0A087WSZ3 146 aa10.3□□□□□ -0.76
CHKA-201ENST00000265689 KLKP1Q107X0 134 aa10.29□□□□□ -0.76
CHKA-201ENST00000265689 C4orf26Q17RF5 130 aa10.29□□□□□ -0.76
CHKA-201ENST00000265689 DSCR10P59022 87 aa10.28□□□□□ -0.76
CHKA-201ENST00000265689 Q5XG85 94 aa10.28□□□□□ -0.76
CHKA-201ENST00000265689 LRP1BQ9NZR2 4599 aa10.27□□□□□ -0.77
CHKA-201ENST00000265689 DEFB116Q30KQ4 102 aa10.27□□□□□ -0.77
CHKA-201ENST00000265689 K7EQZ3 153 aa10.24□□□□□ -0.77
CHKA-201ENST00000265689 C5orf47Q569G3 176 aa10.24□□□□□ -0.77
CHKA-201ENST00000265689 FAM30AQ9NZY2 134 aa10.24□□□□□ -0.77
CHKA-201ENST00000265689 IGLV9-49A0A0B4J1Y8 123 aa10.23□□□□□ -0.77
CHKA-201ENST00000265689 HRCT1Q6UXD1 115 aa10.23□□□□□ -0.77
CHKA-201ENST00000265689 ZNF861PO60384 105 aa10.21□□□□□ -0.78
CHKA-201ENST00000265689 LINC00483Q53H64 154 aa10.21□□□□□ -0.78
CHKA-201ENST00000265689 ANAPC11Q9NYG5 84 aa10.2□□□□□ -0.78
CHKA-201ENST00000265689 SERP1Q9Y6X1 66 aa10.2□□□□□ -0.78
CHKA-201ENST00000265689 TMEM254Q8TBM7 123 aa10.18□□□□□ -0.78
CHKA-201ENST00000265689 DYNC1H1Q14204 4646 aaKnown RBP10.18□□□□□ -0.78
CHKA-201ENST00000265689 ZNF706Q9Y5V0 76 aaPredicted RBP10.17□□□□□ -0.78
CHKA-201ENST00000265689 CIRBP-AS1Q8TBR5 109 aa10.17□□□□□ -0.78
CHKA-201ENST00000265689 OCR1Q9BZK8 76 aa10.17□□□□□ -0.78
CHKA-201ENST00000265689 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
CHKA-201ENST00000265689 RPL37AP61513 92 aaKnown RBP10.16□□□□□ -0.78
CHKA-201ENST00000265689 LCE6AA0A183 80 aa10.16□□□□□ -0.78
CHKA-201ENST00000265689 KRTAP10-1P60331 282 aa10.15□□□□□ -0.78
CHKA-201ENST00000265689 IGLV7-43P04211 117 aa10.14□□□□□ -0.79
CHKA-201ENST00000265689 LINC00472Q9H8W2 130 aa10.13□□□□□ -0.79
CHKA-201ENST00000265689 MOBPQ13875 183 aa10.12□□□□□ -0.79
CHKA-201ENST00000265689 NDUFC1O43677 76 aa10.11□□□□□ -0.79
CHKA-201ENST00000265689 HCG22E2RYF7 251 aa10.11□□□□□ -0.79
CHKA-201ENST00000265689 A0A0U1RQV1 116 aa10.09□□□□□ -0.79
CHKA-201ENST00000265689 FP248Q71RG6 208 aaPredicted RBP10.09□□□□□ -0.79
CHKA-201ENST00000265689 Q6ZSA8 131 aa10.08□□□□□ -0.8
CHKA-201ENST00000265689 FAT1Q14517 4588 aa10.07□□□□□ -0.8
CHKA-201ENST00000265689 WFDC13Q8IUB5 93 aa10.07□□□□□ -0.8
CHKA-201ENST00000265689 PRR15Q8IV56 129 aa10.05□□□□□ -0.8
CHKA-201ENST00000265689 A8MWP4 228 aa10.05□□□□□ -0.8
CHKA-201ENST00000265689 APOBP04114 4563 aaKnown RBP10.04□□□□□ -0.8
CHKA-201ENST00000265689 SMIM26A0A096LP01 95 aa10.03□□□□□ -0.8
CHKA-201ENST00000265689 Q96NJ1 140 aa10.03□□□□□ -0.8
CHKA-201ENST00000265689 FAM229BQ4G0N7 80 aa10.02□□□□□ -0.8
CHKA-201ENST00000265689 KRTAP29-1A8MX34 341 aaPredicted RBP10.01□□□□□ -0.81
CHKA-201ENST00000265689 ATP5EP56381 51 aaPredicted RBP10.01□□□□□ -0.81
CHKA-201ENST00000265689 LINC00336Q6ZUF6 198 aa9.99□□□□□ -0.81
CHKA-201ENST00000265689 CASC2Q6XLA1 102 aa9.98□□□□□ -0.81
CHKA-201ENST00000265689 EPPK1P58107 5090 aaKnown RBP9.98□□□□□ -0.81
CHKA-201ENST00000265689 NDUFB1O75438 58 aa9.95□□□□□ -0.82
CHKA-201ENST00000265689 MPLKIPQ8TAP9 179 aa9.95□□□□□ -0.82
CHKA-201ENST00000265689 A0A1B0GVY2 172 aa9.94□□□□□ -0.82
CHKA-201ENST00000265689 MMP24-AS1A0A0U1RRL7 71 aa9.94□□□□□ -0.82
CHKA-201ENST00000265689 SMR3BP02814 79 aaPredicted RBP9.93□□□□□ -0.82
CHKA-201ENST00000265689 A0A087X002 238 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms