RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 C14orf177Q52M58 125 aa6.56□□□□□ -1.36
LSG1-201ENST00000265245 Q8NBF4 154 aa6.56□□□□□ -1.36
LSG1-201ENST00000265245 A0A1W2PNM2 257 aa6.55□□□□□ -1.36
LSG1-201ENST00000265245 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
LSG1-201ENST00000265245 CHKB-CPT1BH3BT56 60 aa6.55□□□□□ -1.36
LSG1-201ENST00000265245 APLNQ9ULZ1 77 aa6.55□□□□□ -1.36
LSG1-201ENST00000265245 IGKV4-1P06312 121 aa6.54□□□□□ -1.36
LSG1-201ENST00000265245 TMEM254Q8TBM7 123 aa6.54□□□□□ -1.36
LSG1-201ENST00000265245 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.54□□□□□ -1.36
LSG1-201ENST00000265245 KLKP1Q107X0 134 aa6.53□□□□□ -1.36
LSG1-201ENST00000265245 A0A1W2PNN7 141 aa6.53□□□□□ -1.36
LSG1-201ENST00000265245 PRLHP81277 87 aa6.52□□□□□ -1.37
LSG1-201ENST00000265245 SPRR4Q96PI1 79 aa6.52□□□□□ -1.37
LSG1-201ENST00000265245 B9D2Q9BPU9 175 aa6.52□□□□□ -1.37
LSG1-201ENST00000265245 PRKDCP78527 4128 aaKnown RBP6.52□□□□□ -1.37
LSG1-201ENST00000265245 PRR15Q8IV56 129 aa6.51□□□□□ -1.37
LSG1-201ENST00000265245 FAM30AQ9NZY2 134 aa6.51□□□□□ -1.37
LSG1-201ENST00000265245 DYNC2H1Q8NCM8 4307 aaKnown RBP6.51□□□□□ -1.37
LSG1-201ENST00000265245 EPM2AB3EWF7 344 aa6.5□□□□□ -1.37
LSG1-201ENST00000265245 SMIM29Q86T20 159 aa6.5□□□□□ -1.37
LSG1-201ENST00000265245 LINC00476Q8WZB0 136 aa6.5□□□□□ -1.37
LSG1-201ENST00000265245 PRAC1Q96KF2 57 aa6.5□□□□□ -1.37
LSG1-201ENST00000265245 TRAV22A0A0B4J277 110 aa6.49□□□□□ -1.37
LSG1-201ENST00000265245 DNAH7Q8WXX0 4024 aa6.49□□□□□ -1.37
LSG1-201ENST00000265245 CHTF8P0CG12 524 aa6.48□□□□□ -1.37
LSG1-201ENST00000265245 C8orf87E5RJ46 101 aa6.48□□□□□ -1.37
LSG1-201ENST00000265245 NDUFC1O43677 76 aa6.48□□□□□ -1.37
LSG1-201ENST00000265245 NUPR2A6NF83 97 aa6.48□□□□□ -1.37
LSG1-201ENST00000265245 NBDYA0A0U1RRE5 68 aa6.47□□□□□ -1.37
LSG1-201ENST00000265245 PHF5AQ7RTV0 110 aaKnown RBP6.47□□□□□ -1.37
LSG1-201ENST00000265245 C9orf163Q8N9P6 203 aa6.47□□□□□ -1.37
LSG1-201ENST00000265245 C1orf64Q8NEQ6 169 aa6.47□□□□□ -1.37
LSG1-201ENST00000265245 OCR1Q9BZK8 76 aa6.47□□□□□ -1.37
LSG1-201ENST00000265245 IGFL1Q6UW32 110 aa6.46□□□□□ -1.37
LSG1-201ENST00000265245 A6NED7 52 aa6.46□□□□□ -1.38
LSG1-201ENST00000265245 UBE2AP49459 152 aa6.46□□□□□ -1.38
LSG1-201ENST00000265245 COL7A1Q02388 2944 aa6.46□□□□□ -1.38
LSG1-201ENST00000265245 MEGF8Q7Z7M0 2845 aa6.46□□□□□ -1.38
LSG1-201ENST00000265245 DNAH10Q8IVF4 4471 aa6.46□□□□□ -1.38
LSG1-201ENST00000265245 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
LSG1-201ENST00000265245 PRR15LQ9BU68 103 aa6.45□□□□□ -1.38
LSG1-201ENST00000265245 IGLV8-61A0A075B6I0 122 aa6.44□□□□□ -1.38
LSG1-201ENST00000265245 HCG22E2RYF7 251 aa6.44□□□□□ -1.38
LSG1-201ENST00000265245 H0Y9J4 135 aa6.44□□□□□ -1.38
LSG1-201ENST00000265245 DEFB116Q30KQ4 102 aa6.44□□□□□ -1.38
LSG1-201ENST00000265245 DSCR10P59022 87 aa6.44□□□□□ -1.38
LSG1-201ENST00000265245 LYSTQ99698 3801 aa6.44□□□□□ -1.38
LSG1-201ENST00000265245 A0A0G2JQZ4 141 aa6.43□□□□□ -1.38
LSG1-201ENST00000265245 A0A087WSZ3 146 aa6.43□□□□□ -1.38
LSG1-201ENST00000265245 K7EQZ3 153 aa6.43□□□□□ -1.38
LSG1-201ENST00000265245 KRTAP11-1Q8IUC1 163 aa6.43□□□□□ -1.38
LSG1-201ENST00000265245 TENM2Q9NT68 2774 aa6.42□□□□□ -1.38
LSG1-201ENST00000265245 SPRR1BP22528 89 aa6.41□□□□□ -1.38
LSG1-201ENST00000265245 Q6ZRN7 208 aaPredicted RBP6.41□□□□□ -1.38
LSG1-201ENST00000265245 ATP5EP56381 51 aaPredicted RBP6.41□□□□□ -1.38
LSG1-201ENST00000265245 ADM2Q7Z4H4 148 aa6.39□□□□□ -1.39
LSG1-201ENST00000265245 PRR26Q8N8Z3 221 aa6.39□□□□□ -1.39
LSG1-201ENST00000265245 PANO1I0J062 215 aa6.37□□□□□ -1.39
LSG1-201ENST00000265245 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
LSG1-201ENST00000265245 PLECQ15149 4684 aaKnown RBP6.36□□□□□ -1.39
LSG1-201ENST00000265245 SPACA4Q8TDM5 124 aa6.36□□□□□ -1.39
LSG1-201ENST00000265245 CSMD3Q7Z407 3707 aa6.35□□□□□ -1.39
LSG1-201ENST00000265245 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.35□□□□□ -1.39
LSG1-201ENST00000265245 A0A087WTM6 91 aa6.34□□□□□ -1.39
LSG1-201ENST00000265245 LCE6AA0A183 80 aa6.34□□□□□ -1.39
LSG1-201ENST00000265245 KRTAP13-1Q8IUC0 172 aa6.34□□□□□ -1.39
LSG1-201ENST00000265245 WFDC13Q8IUB5 93 aa6.33□□□□□ -1.4
LSG1-201ENST00000265245 Q5VV11 94 aa6.33□□□□□ -1.4
LSG1-201ENST00000265245 LCA10Q71F78 164 aa6.33□□□□□ -1.4
LSG1-201ENST00000265245 SRRM2Q9UQ35 2752 aaKnown RBP6.32□□□□□ -1.4
LSG1-201ENST00000265245 RPL37AP61513 92 aaKnown RBP6.32□□□□□ -1.4
LSG1-201ENST00000265245 FBN3Q75N90 2809 aa6.31□□□□□ -1.4
LSG1-201ENST00000265245 RTL8CO15255 209 aa6.31□□□□□ -1.4
LSG1-201ENST00000265245 A8MWP4 228 aa6.3□□□□□ -1.4
LSG1-201ENST00000265245 LINC00472Q9H8W2 130 aa6.3□□□□□ -1.4
LSG1-201ENST00000265245 FLG2Q5D862 2391 aaPredicted RBP6.3□□□□□ -1.4
LSG1-201ENST00000265245 DNAH6Q9C0G6 4158 aa6.3□□□□□ -1.4
LSG1-201ENST00000265245 IGLV9-49A0A0B4J1Y8 123 aa6.29□□□□□ -1.4
LSG1-201ENST00000265245 ZNF706Q9Y5V0 76 aaPredicted RBP6.29□□□□□ -1.4
LSG1-201ENST00000265245 MP68P56378 58 aa6.29□□□□□ -1.4
LSG1-201ENST00000265245 CASC2Q6XLA1 102 aa6.29□□□□□ -1.4
LSG1-201ENST00000265245 Q1T7F1 81 aa6.28□□□□□ -1.4
LSG1-201ENST00000265245 ZCCHC13Q8WW36 166 aaKnown RBP6.28□□□□□ -1.4
LSG1-201ENST00000265245 Q6ZR54 194 aa6.28□□□□□ -1.4
LSG1-201ENST00000265245 STARD9Q9P2P6 4700 aa6.27□□□□□ -1.41
LSG1-201ENST00000265245 KRTAP29-1A8MX34 341 aaPredicted RBP6.27□□□□□ -1.41
LSG1-201ENST00000265245 NDUFB1O75438 58 aa6.27□□□□□ -1.41
LSG1-201ENST00000265245 VPS13DQ5THJ4 4388 aa6.26□□□□□ -1.41
LSG1-201ENST00000265245 LINC00483Q53H64 154 aa6.26□□□□□ -1.41
LSG1-201ENST00000265245 PSORS1C2Q9UIG4 136 aa6.26□□□□□ -1.41
LSG1-201ENST00000265245 IGLV5-52A0A0A0MRZ9 124 aa6.26□□□□□ -1.41
LSG1-201ENST00000265245 SPAG11AQ6PDA7 123 aa6.26□□□□□ -1.41
LSG1-201ENST00000265245 C7orf65Q6ZTY9 151 aa6.26□□□□□ -1.41
LSG1-201ENST00000265245 PLAC8Q9NZF1 115 aa6.26□□□□□ -1.41
LSG1-201ENST00000265245 LINC00313P59037 77 aa6.25□□□□□ -1.41
LSG1-201ENST00000265245 C1orf134Q5TEV5 83 aa6.25□□□□□ -1.41
LSG1-201ENST00000265245 NDUFS5O43920 106 aa6.24□□□□□ -1.41
LSG1-201ENST00000265245 ZNF861PO60384 105 aa6.23□□□□□ -1.41
LSG1-201ENST00000265245 LINC00208Q96KT6 92 aa6.23□□□□□ -1.41
LSG1-201ENST00000265245 ALMS1Q8TCU4 4167 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms