RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 NOTCH1P46531 2555 aa3.53□□□□□ -1.84
XRN1-201ENST00000264951 DMDP11532 3685 aa3.53□□□□□ -1.85
XRN1-201ENST00000264951 PRR26Q8N8Z3 221 aa3.52□□□□□ -1.85
XRN1-201ENST00000264951 A0A087X002 238 aa3.52□□□□□ -1.85
XRN1-201ENST00000264951 PSORS1C2Q9UIG4 136 aa3.51□□□□□ -1.85
XRN1-201ENST00000264951 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
XRN1-201ENST00000264951 FAM168BA1KXE4 195 aa3.51□□□□□ -1.85
XRN1-201ENST00000264951 A0A1W2PPR1 153 aa3.51□□□□□ -1.85
XRN1-201ENST00000264951 Q5XG85 94 aa3.51□□□□□ -1.85
XRN1-201ENST00000264951 SPINK7P58062 85 aa3.5□□□□□ -1.85
XRN1-201ENST00000264951 ROMO1P60602 79 aa3.5□□□□□ -1.85
XRN1-201ENST00000264951 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.5□□□□□ -1.85
XRN1-201ENST00000264951 RPL37P61927 97 aaKnown RBP3.5□□□□□ -1.85
XRN1-201ENST00000264951 A0A087WTM6 91 aa3.5□□□□□ -1.85
XRN1-201ENST00000264951 Q5VV11 94 aa3.49□□□□□ -1.85
XRN1-201ENST00000264951 Q8N1X5 172 aa3.49□□□□□ -1.85
XRN1-201ENST00000264951 Q6ZSA8 131 aa3.49□□□□□ -1.85
XRN1-201ENST00000264951 CENPEQ02224 2701 aa3.48□□□□□ -1.85
XRN1-201ENST00000264951 WDFY3Q8IZQ1 3526 aa3.48□□□□□ -1.85
XRN1-201ENST00000264951 AKAP13Q12802 2813 aa3.48□□□□□ -1.85
XRN1-201ENST00000264951 FP248Q71RG6 208 aaPredicted RBP3.48□□□□□ -1.85
XRN1-201ENST00000264951 KRTAP10-9P60411 292 aa3.48□□□□□ -1.85
XRN1-201ENST00000264951 C19orf73Q9NVV2 129 aa3.48□□□□□ -1.85
XRN1-201ENST00000264951 ZNF575Q86XF7 245 aa3.47□□□□□ -1.85
XRN1-201ENST00000264951 ZCCHC13Q8WW36 166 aaKnown RBP3.47□□□□□ -1.85
XRN1-201ENST00000264951 ITPR3Q14573 2671 aa3.46□□□□□ -1.85
XRN1-201ENST00000264951 SPRR1BP22528 89 aa3.46□□□□□ -1.86
XRN1-201ENST00000264951 SMR3AQ99954 134 aa3.46□□□□□ -1.86
XRN1-201ENST00000264951 COL4A2P08572 1712 aa3.46□□□□□ -1.86
XRN1-201ENST00000264951 BAHCC1Q9P281 2608 aa3.46□□□□□ -1.86
XRN1-201ENST00000264951 FLNAP21333 2647 aaKnown RBP3.46□□□□□ -1.86
XRN1-201ENST00000264951 MMP24-AS1A0A0U1RRL7 71 aa3.45□□□□□ -1.86
XRN1-201ENST00000264951 C9orf92A6NGG3 77 aa3.45□□□□□ -1.86
XRN1-201ENST00000264951 R4GN34 69 aa3.45□□□□□ -1.86
XRN1-201ENST00000264951 S4R3F8 94 aa3.44□□□□□ -1.86
XRN1-201ENST00000264951 CFAP46Q8IYW2 2715 aa3.44□□□□□ -1.86
XRN1-201ENST00000264951 UNC79Q9P2D8 2635 aa3.44□□□□□ -1.86
XRN1-201ENST00000264951 GIG44P09565 113 aaPredicted RBP3.44□□□□□ -1.86
XRN1-201ENST00000264951 HELZ2Q9BYK8 2649 aaKnown RBP3.43□□□□□ -1.86
XRN1-201ENST00000264951 SPRR1AP35321 89 aa3.43□□□□□ -1.86
XRN1-201ENST00000264951 COL6A5A8TX70 2615 aa3.43□□□□□ -1.86
XRN1-201ENST00000264951 ASPMQ8IZT6 3477 aa3.42□□□□□ -1.86
XRN1-201ENST00000264951 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
XRN1-201ENST00000264951 LINC00472Q9H8W2 130 aa3.41□□□□□ -1.86
XRN1-201ENST00000264951 ZNF292O60281 2723 aa3.41□□□□□ -1.86
XRN1-201ENST00000264951 LOC400499M0QZD8 3231 aa3.41□□□□□ -1.86
XRN1-201ENST00000264951 CFAP47Q6ZTR5 3102 aa3.41□□□□□ -1.86
XRN1-201ENST00000264951 FRYQ5TBA9 3013 aa3.4□□□□□ -1.86
XRN1-201ENST00000264951 A0A1W2PNN7 141 aa3.4□□□□□ -1.86
XRN1-201ENST00000264951 Q5W150 140 aa3.4□□□□□ -1.86
XRN1-201ENST00000264951 SPATA8Q6RVD6 105 aa3.4□□□□□ -1.86
XRN1-201ENST00000264951 SEC61BP60468 96 aaKnown RBP3.4□□□□□ -1.87
XRN1-201ENST00000264951 KRTAP24-1Q3LI83 254 aa3.4□□□□□ -1.87
XRN1-201ENST00000264951 Q6ZR54 194 aa3.4□□□□□ -1.87
XRN1-201ENST00000264951 H1FX-AS1Q4G0G2 97 aa3.39□□□□□ -1.87
XRN1-201ENST00000264951 DMXL1Q9Y485 3027 aa3.39□□□□□ -1.87
XRN1-201ENST00000264951 PRRC2CQ9Y520 2896 aaKnown RBP3.39□□□□□ -1.87
XRN1-201ENST00000264951 NBEAQ8NFP9 2946 aa3.39□□□□□ -1.87
XRN1-201ENST00000264951 DCHS1Q96JQ0 3298 aa3.39□□□□□ -1.87
XRN1-201ENST00000264951 BOD1L1Q8NFC6 3051 aa3.37□□□□□ -1.87
XRN1-201ENST00000264951 PLAC8Q9NZF1 115 aa3.37□□□□□ -1.87
XRN1-201ENST00000264951 A0A096LNT2 108 aa3.37□□□□□ -1.87
XRN1-201ENST00000264951 K7EIL1 84 aa3.37□□□□□ -1.87
XRN1-201ENST00000264951 TEP1Q99973 2627 aaKnown RBP3.36□□□□□ -1.87
XRN1-201ENST00000264951 DSPP15924 2871 aaKnown RBP3.36□□□□□ -1.87
XRN1-201ENST00000264951 MGAQ8IWI9 3026 aa3.36□□□□□ -1.87
XRN1-201ENST00000264951 M0QZ58 72 aa3.35□□□□□ -1.87
XRN1-201ENST00000264951 CHD6Q8TD26 2715 aa3.35□□□□□ -1.87
XRN1-201ENST00000264951 ZZEF1O43149 2961 aa3.35□□□□□ -1.87
XRN1-201ENST00000264951 PLAC4Q8WY50 150 aa3.35□□□□□ -1.87
XRN1-201ENST00000264951 A0A0G2JQZ4 141 aa3.34□□□□□ -1.87
XRN1-201ENST00000264951 SETXQ7Z333 2677 aaKnown RBP3.34□□□□□ -1.87
XRN1-201ENST00000264951 M0R2T5 61 aa3.34□□□□□ -1.87
XRN1-201ENST00000264951 KRTAP25-1Q3LHN0 102 aa3.34□□□□□ -1.87
XRN1-201ENST00000264951 SPENQ96T58 3664 aaKnown RBP3.34□□□□□ -1.88
XRN1-201ENST00000264951 ANAPC11Q9NYG5 84 aa3.33□□□□□ -1.88
XRN1-201ENST00000264951 PANO1I0J062 215 aa3.33□□□□□ -1.88
XRN1-201ENST00000264951 IGSF10Q6WRI0 2623 aa3.33□□□□□ -1.88
XRN1-201ENST00000264951 LAMA5O15230 3695 aa3.33□□□□□ -1.88
XRN1-201ENST00000264951 ZFHX4Q86UP3 3567 aa3.33□□□□□ -1.88
XRN1-201ENST00000264951 GCN1Q92616 2671 aaKnown RBP3.32□□□□□ -1.88
XRN1-201ENST00000264951 A6NN06 94 aa3.32□□□□□ -1.88
XRN1-201ENST00000264951 RPS29P62273 56 aaKnown RBP3.31□□□□□ -1.88
XRN1-201ENST00000264951 KRTAP10-11P60412 298 aa3.31□□□□□ -1.88
XRN1-201ENST00000264951 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
XRN1-201ENST00000264951 ATMQ13315 3056 aa3.31□□□□□ -1.88
XRN1-201ENST00000264951 DMXL2Q8TDJ6 3036 aa3.31□□□□□ -1.88
XRN1-201ENST00000264951 ITPR1Q14643 2758 aa3.3□□□□□ -1.88
XRN1-201ENST00000264951 KRTAP29-1A8MX34 341 aaPredicted RBP3.29□□□□□ -1.88
XRN1-201ENST00000264951 CYSTM1Q9H1C7 97 aa3.29□□□□□ -1.88
XRN1-201ENST00000264951 TEX15Q9BXT5 2789 aa3.28□□□□□ -1.88
XRN1-201ENST00000264951 LCE6AA0A183 80 aa3.28□□□□□ -1.88
XRN1-201ENST00000264951 KRTAP26-1Q6PEX3 210 aa3.28□□□□□ -1.88
XRN1-201ENST00000264951 NSD1Q96L73 2696 aaPredicted RBP3.28□□□□□ -1.88
XRN1-201ENST00000264951 SMR3BP02814 79 aaPredicted RBP3.28□□□□□ -1.89
XRN1-201ENST00000264951 KALRNO60229 2985 aa3.27□□□□□ -1.89
XRN1-201ENST00000264951 OXTP01178 125 aa3.27□□□□□ -1.89
XRN1-201ENST00000264951 CASC10Q5T4H9 136 aa3.26□□□□□ -1.89
XRN1-201ENST00000264951 RELNP78509 3460 aa3.26□□□□□ -1.89
XRN1-201ENST00000264951 FLNCQ14315 2725 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms