RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ANK2Q01484 3957 aa8.45□□□□□ -1.06
NUP54-201ENST00000264883 KRTAP10-11P60412 298 aa8.44□□□□□ -1.06
NUP54-201ENST00000264883 Q9BRP9 147 aa8.44□□□□□ -1.06
NUP54-201ENST00000264883 WFDC13Q8IUB5 93 aa8.44□□□□□ -1.06
NUP54-201ENST00000264883 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
NUP54-201ENST00000264883 A6NED7 52 aa8.43□□□□□ -1.06
NUP54-201ENST00000264883 A6NN06 94 aa8.43□□□□□ -1.06
NUP54-201ENST00000264883 DEFB116Q30KQ4 102 aa8.43□□□□□ -1.06
NUP54-201ENST00000264883 Q75L30 129 aa8.43□□□□□ -1.06
NUP54-201ENST00000264883 PHF5AQ7RTV0 110 aaKnown RBP8.43□□□□□ -1.06
NUP54-201ENST00000264883 DNAH3Q8TD57 4116 aa8.43□□□□□ -1.06
NUP54-201ENST00000264883 C7orf33Q8WU49 177 aa8.42□□□□□ -1.06
NUP54-201ENST00000264883 TLX1NBP0CAT3 122 aa8.41□□□□□ -1.06
NUP54-201ENST00000264883 LINC01556Q5JQF7 62 aa8.41□□□□□ -1.06
NUP54-201ENST00000264883 Q6ZRX8 168 aa8.41□□□□□ -1.06
NUP54-201ENST00000264883 NBEAL1Q6ZS30 2694 aa8.39□□□□□ -1.07
NUP54-201ENST00000264883 NOTCH1P46531 2555 aa8.39□□□□□ -1.07
NUP54-201ENST00000264883 IGLV5-37A0A075B6J1 123 aa8.39□□□□□ -1.07
NUP54-201ENST00000264883 H0Y9P7 68 aa8.39□□□□□ -1.07
NUP54-201ENST00000264883 SERTAD4-AS1Q5TG53 156 aa8.39□□□□□ -1.07
NUP54-201ENST00000264883 LOC101927531A0A1B0GV80 90 aa8.39□□□□□ -1.07
NUP54-201ENST00000264883 H3BPC8 53 aa8.37□□□□□ -1.07
NUP54-201ENST00000264883 CDC42SE1Q9NRR8 79 aa8.37□□□□□ -1.07
NUP54-201ENST00000264883 IGKV2D-24A0A075B6R9 120 aa8.37□□□□□ -1.07
NUP54-201ENST00000264883 RPL37AP8A6NKH3 93 aa8.36□□□□□ -1.07
NUP54-201ENST00000264883 SPRR1AP35321 89 aa8.36□□□□□ -1.07
NUP54-201ENST00000264883 C7orf65Q6ZTY9 151 aa8.36□□□□□ -1.07
NUP54-201ENST00000264883 KRTAP4-16G5E9R7 235 aaPredicted RBP8.35□□□□□ -1.07
NUP54-201ENST00000264883 COA5Q86WW8 74 aa8.34□□□□□ -1.07
NUP54-201ENST00000264883 IGLV1-50A0A075B6I6 118 aa8.34□□□□□ -1.07
NUP54-201ENST00000264883 LINC00476Q8WZB0 136 aa8.34□□□□□ -1.07
NUP54-201ENST00000264883 MGAM2Q2M2H8 2515 aa8.34□□□□□ -1.08
NUP54-201ENST00000264883 KRTAP29-1A8MX34 341 aaPredicted RBP8.33□□□□□ -1.08
NUP54-201ENST00000264883 C9orf163Q8N9P6 203 aa8.33□□□□□ -1.08
NUP54-201ENST00000264883 A0A0G2JQZ4 141 aa8.32□□□□□ -1.08
NUP54-201ENST00000264883 A0A1W2PNN7 141 aa8.32□□□□□ -1.08
NUP54-201ENST00000264883 DNAH10OSP0CZ25 163 aa8.32□□□□□ -1.08
NUP54-201ENST00000264883 RPL37AP61513 92 aaKnown RBP8.31□□□□□ -1.08
NUP54-201ENST00000264883 MOBPQ13875 183 aa8.31□□□□□ -1.08
NUP54-201ENST00000264883 CASC2Q6XLA1 102 aa8.31□□□□□ -1.08
NUP54-201ENST00000264883 TENM3Q9P273 2699 aa8.3□□□□□ -1.08
NUP54-201ENST00000264883 IGFL1Q6UW32 110 aa8.29□□□□□ -1.08
NUP54-201ENST00000264883 C11orf45Q8TAV5 145 aa8.29□□□□□ -1.08
NUP54-201ENST00000264883 A0A087WSZ3 146 aa8.28□□□□□ -1.08
NUP54-201ENST00000264883 IGLV7-46A0A075B6I9 117 aa8.27□□□□□ -1.09
NUP54-201ENST00000264883 DEFB131BA0A096LNP1 70 aa8.27□□□□□ -1.09
NUP54-201ENST00000264883 FAM168BA1KXE4 195 aa8.27□□□□□ -1.09
NUP54-201ENST00000264883 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
NUP54-201ENST00000264883 LINC01558Q9Y6Z2 57 aa8.26□□□□□ -1.09
NUP54-201ENST00000264883 K7EIL1 84 aa8.25□□□□□ -1.09
NUP54-201ENST00000264883 CNBPP62633 177 aaKnown RBP8.25□□□□□ -1.09
NUP54-201ENST00000264883 SPAG11AQ6PDA7 123 aa8.25□□□□□ -1.09
NUP54-201ENST00000264883 C8orf87E5RJ46 101 aa8.24□□□□□ -1.09
NUP54-201ENST00000264883 PLAC8Q9NZF1 115 aa8.23□□□□□ -1.09
NUP54-201ENST00000264883 REG3GQ6UW15 175 aa8.22□□□□□ -1.09
NUP54-201ENST00000264883 IGLV8-61A0A075B6I0 122 aa8.21□□□□□ -1.1
NUP54-201ENST00000264883 SPINK7P58062 85 aa8.21□□□□□ -1.1
NUP54-201ENST00000264883 KRTAP7-1Q8IUC3 87 aa8.2□□□□□ -1.1
NUP54-201ENST00000264883 A8MWP4 228 aa8.19□□□□□ -1.1
NUP54-201ENST00000264883 PCOTHQ58A44 107 aa8.19□□□□□ -1.1
NUP54-201ENST00000264883 HUWE1Q7Z6Z7 4374 aaKnown RBP8.17□□□□□ -1.1
NUP54-201ENST00000264883 LINC00313P59037 77 aa8.14□□□□□ -1.11
NUP54-201ENST00000264883 LINC00472Q9H8W2 130 aa8.14□□□□□ -1.11
NUP54-201ENST00000264883 COL7A1Q02388 2944 aa8.14□□□□□ -1.11
NUP54-201ENST00000264883 MMP24-AS1A0A0U1RRL7 71 aa8.13□□□□□ -1.11
NUP54-201ENST00000264883 H0Y9J4 135 aa8.13□□□□□ -1.11
NUP54-201ENST00000264883 CASC10Q5T4H9 136 aa8.12□□□□□ -1.11
NUP54-201ENST00000264883 STAB2Q8WWQ8 2551 aa8.12□□□□□ -1.11
NUP54-201ENST00000264883 PRLHP81277 87 aa8.11□□□□□ -1.11
NUP54-201ENST00000264883 DNAH9Q9NYC9 4486 aa8.11□□□□□ -1.11
NUP54-201ENST00000264883 DNHD1Q96M86 4753 aa8.11□□□□□ -1.11
NUP54-201ENST00000264883 HRES1P13985 223 aa8.11□□□□□ -1.11
NUP54-201ENST00000264883 PRAC1Q96KF2 57 aa8.11□□□□□ -1.11
NUP54-201ENST00000264883 SPRR1BP22528 89 aa8.09□□□□□ -1.11
NUP54-201ENST00000264883 TP53AIP1Q9HCN2 124 aa8.08□□□□□ -1.12
NUP54-201ENST00000264883 IGKV2-24A0A0C4DH68 120 aa8.05□□□□□ -1.12
NUP54-201ENST00000264883 MEGF8Q7Z7M0 2845 aa8.05□□□□□ -1.12
NUP54-201ENST00000264883 Q6ZR54 194 aa8.05□□□□□ -1.12
NUP54-201ENST00000264883 A0A096LNI7 61 aa8.04□□□□□ -1.12
NUP54-201ENST00000264883 LINC01554Q52M75 96 aa8.04□□□□□ -1.12
NUP54-201ENST00000264883 ADM2Q7Z4H4 148 aa8.04□□□□□ -1.12
NUP54-201ENST00000264883 H3BS24 57 aa8.03□□□□□ -1.12
NUP54-201ENST00000264883 PLA2G1BP04054 148 aaKnown RBP8.03□□□□□ -1.12
NUP54-201ENST00000264883 C14orf177Q52M58 125 aa8.03□□□□□ -1.12
NUP54-201ENST00000264883 ASB16-AS1Q495Z4 193 aa8.01□□□□□ -1.13
NUP54-201ENST00000264883 PRKDCP78527 4128 aaKnown RBP8.01□□□□□ -1.13
NUP54-201ENST00000264883 PRR26Q8N8Z3 221 aa7.99□□□□□ -1.13
NUP54-201ENST00000264883 TENM2Q9NT68 2774 aa7.97□□□□□ -1.13
NUP54-201ENST00000264883 DYNC2H1Q8NCM8 4307 aaKnown RBP7.97□□□□□ -1.13
NUP54-201ENST00000264883 C8orf17Q9NRJ1 99 aa7.97□□□□□ -1.13
NUP54-201ENST00000264883 DNAH1Q9P2D7 4330 aa7.95□□□□□ -1.14
NUP54-201ENST00000264883 Q96NJ1 140 aa7.93□□□□□ -1.14
NUP54-201ENST00000264883 CSMD3Q7Z407 3707 aa7.93□□□□□ -1.14
NUP54-201ENST00000264883 RTL8CO15255 209 aa7.91□□□□□ -1.14
NUP54-201ENST00000264883 IGHV6-1A0A0B4J1U7 121 aa7.91□□□□□ -1.14
NUP54-201ENST00000264883 DNAH7Q8WXX0 4024 aa7.91□□□□□ -1.14
NUP54-201ENST00000264883 APLNQ9ULZ1 77 aa7.9□□□□□ -1.14
NUP54-201ENST00000264883 MRPL34Q9BQ48 92 aaKnown RBP7.9□□□□□ -1.15
NUP54-201ENST00000264883 FBN3Q75N90 2809 aa7.9□□□□□ -1.15
NUP54-201ENST00000264883 A0A087X002 238 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms