RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 RPL37AP61513 92 aaKnown RBP11.39□□□□□ -0.59
TRAF4-201ENST00000262395 IGFL1Q6UW32 110 aa11.39□□□□□ -0.59
TRAF4-201ENST00000262395 HCG22E2RYF7 251 aa11.37□□□□□ -0.59
TRAF4-201ENST00000262395 PMAIP1Q13794 54 aa11.37□□□□□ -0.59
TRAF4-201ENST00000262395 A0A087WSZ3 146 aa11.37□□□□□ -0.59
TRAF4-201ENST00000262395 LCE6AA0A183 80 aa11.35□□□□□ -0.59
TRAF4-201ENST00000262395 A0A1B0GW54 56 aa11.35□□□□□ -0.59
TRAF4-201ENST00000262395 DNAH10Q8IVF4 4471 aa11.35□□□□□ -0.59
TRAF4-201ENST00000262395 PRR15Q8IV56 129 aa11.34□□□□□ -0.59
TRAF4-201ENST00000262395 A0A096LNI7 61 aa11.33□□□□□ -0.6
TRAF4-201ENST00000262395 ZCCHC13Q8WW36 166 aaKnown RBP11.33□□□□□ -0.6
TRAF4-201ENST00000262395 LYSTQ99698 3801 aa11.33□□□□□ -0.6
TRAF4-201ENST00000262395 CMYA5Q8N3K9 4069 aa11.32□□□□□ -0.6
TRAF4-201ENST00000262395 TRAV22A0A0B4J277 110 aa11.31□□□□□ -0.6
TRAF4-201ENST00000262395 DNAH1Q9P2D7 4330 aa11.3□□□□□ -0.6
TRAF4-201ENST00000262395 Q1T7F1 81 aa11.3□□□□□ -0.6
TRAF4-201ENST00000262395 KRTAP24-1Q3LI83 254 aa11.29□□□□□ -0.6
TRAF4-201ENST00000262395 A8MU10 97 aa11.27□□□□□ -0.61
TRAF4-201ENST00000262395 CHTF8P0CG12 524 aa11.27□□□□□ -0.61
TRAF4-201ENST00000262395 A8MUN3 132 aa11.26□□□□□ -0.61
TRAF4-201ENST00000262395 UBE2AP49459 152 aa11.26□□□□□ -0.61
TRAF4-201ENST00000262395 KRTAP11-1Q8IUC1 163 aa11.26□□□□□ -0.61
TRAF4-201ENST00000262395 LINC00208Q96KT6 92 aa11.26□□□□□ -0.61
TRAF4-201ENST00000262395 KRTAP1-5Q9BYS1 174 aa11.25□□□□□ -0.61
TRAF4-201ENST00000262395 TENM2Q9NT68 2774 aa11.25□□□□□ -0.61
TRAF4-201ENST00000262395 COL7A1Q02388 2944 aa11.24□□□□□ -0.61
TRAF4-201ENST00000262395 PHF5AQ7RTV0 110 aaKnown RBP11.23□□□□□ -0.61
TRAF4-201ENST00000262395 STAB2Q8WWQ8 2551 aa11.22□□□□□ -0.61
TRAF4-201ENST00000262395 MP68P56378 58 aa11.2□□□□□ -0.62
TRAF4-201ENST00000262395 C16orf90A8MZG2 172 aa11.19□□□□□ -0.62
TRAF4-201ENST00000262395 CASC2Q6XLA1 102 aa11.18□□□□□ -0.62
TRAF4-201ENST00000262395 HUWE1Q7Z6Z7 4374 aaKnown RBP11.17□□□□□ -0.62
TRAF4-201ENST00000262395 MGAM2Q2M2H8 2515 aa11.17□□□□□ -0.62
TRAF4-201ENST00000262395 H0Y9P7 68 aa11.16□□□□□ -0.62
TRAF4-201ENST00000262395 DNAH9Q9NYC9 4486 aa11.16□□□□□ -0.62
TRAF4-201ENST00000262395 CNBPP62633 177 aaKnown RBP11.15□□□□□ -0.62
TRAF4-201ENST00000262395 KRTAP29-1A8MX34 341 aaPredicted RBP11.15□□□□□ -0.63
TRAF4-201ENST00000262395 DNAH3Q8TD57 4116 aa11.14□□□□□ -0.63
TRAF4-201ENST00000262395 CYP4F30PQ9H0H9 118 aa11.14□□□□□ -0.63
TRAF4-201ENST00000262395 IGLV8-61A0A075B6I0 122 aa11.13□□□□□ -0.63
TRAF4-201ENST00000262395 H0Y9J4 135 aa11.12□□□□□ -0.63
TRAF4-201ENST00000262395 CHKB-CPT1BH3BT56 60 aa11.12□□□□□ -0.63
TRAF4-201ENST00000262395 B9D2Q9BPU9 175 aa11.12□□□□□ -0.63
TRAF4-201ENST00000262395 NDUFB1O75438 58 aa11.12□□□□□ -0.63
TRAF4-201ENST00000262395 SPTSSBQ8NFR3 76 aa11.11□□□□□ -0.63
TRAF4-201ENST00000262395 Q5VV11 94 aa11.11□□□□□ -0.63
TRAF4-201ENST00000262395 K7EIL1 84 aa11.1□□□□□ -0.63
TRAF4-201ENST00000262395 UBE2DNLQ8IWF7 75 aa11.09□□□□□ -0.63
TRAF4-201ENST00000262395 LINC00472Q9H8W2 130 aa11.07□□□□□ -0.64
TRAF4-201ENST00000262395 A8MWP4 228 aa11.07□□□□□ -0.64
TRAF4-201ENST00000262395 PRR15LQ9BU68 103 aa11.06□□□□□ -0.64
TRAF4-201ENST00000262395 PANO1I0J062 215 aa11.05□□□□□ -0.64
TRAF4-201ENST00000262395 IGLV9-49A0A0B4J1Y8 123 aa11.04□□□□□ -0.64
TRAF4-201ENST00000262395 CD164Q04900 197 aa11.03□□□□□ -0.64
TRAF4-201ENST00000262395 DNAH7Q8WXX0 4024 aa11.02□□□□□ -0.64
TRAF4-201ENST00000262395 PCOTHQ58A44 107 aa11.02□□□□□ -0.65
TRAF4-201ENST00000262395 Q8N9P0 234 aaPredicted RBP11.01□□□□□ -0.65
TRAF4-201ENST00000262395 MMP24-AS1A0A0U1RRL7 71 aa10.99□□□□□ -0.65
TRAF4-201ENST00000262395 SPRR1BP22528 89 aa10.98□□□□□ -0.65
TRAF4-201ENST00000262395 A6NED7 52 aa10.97□□□□□ -0.65
TRAF4-201ENST00000262395 LIMD2Q9BT23 127 aa10.96□□□□□ -0.66
TRAF4-201ENST00000262395 C9orf163Q8N9P6 203 aa10.95□□□□□ -0.66
TRAF4-201ENST00000262395 SPANXA2-OT1Q8N9U9 137 aa10.94□□□□□ -0.66
TRAF4-201ENST00000262395 KTN1-AS1Q86SY8 53 aa10.93□□□□□ -0.66
TRAF4-201ENST00000262395 LCA10Q71F78 164 aa10.93□□□□□ -0.66
TRAF4-201ENST00000262395 H3BPC8 53 aa10.92□□□□□ -0.66
TRAF4-201ENST00000262395 NDUFS5O43920 106 aa10.92□□□□□ -0.66
TRAF4-201ENST00000262395 ANAPC11Q9NYG5 84 aa10.92□□□□□ -0.66
TRAF4-201ENST00000262395 RBM12B-AS1Q9P1G2 102 aa10.91□□□□□ -0.66
TRAF4-201ENST00000262395 APLNQ9ULZ1 77 aa10.91□□□□□ -0.66
TRAF4-201ENST00000262395 C14orf177Q52M58 125 aa10.91□□□□□ -0.66
TRAF4-201ENST00000262395 COA5Q86WW8 74 aa10.91□□□□□ -0.66
TRAF4-201ENST00000262395 IGHV6-1A0A0B4J1U7 121 aa10.89□□□□□ -0.67
TRAF4-201ENST00000262395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.89□□□□□ -0.67
TRAF4-201ENST00000262395 Q96NJ1 140 aa10.89□□□□□ -0.67
TRAF4-201ENST00000262395 MOBPQ13875 183 aa10.87□□□□□ -0.67
TRAF4-201ENST00000262395 KRTAP13-1Q8IUC0 172 aa10.86□□□□□ -0.67
TRAF4-201ENST00000262395 ATP11AUNQ6ZP68 121 aa10.85□□□□□ -0.67
TRAF4-201ENST00000262395 C8orf17Q9NRJ1 99 aa10.84□□□□□ -0.67
TRAF4-201ENST00000262395 IGLV7-46A0A075B6I9 117 aa10.83□□□□□ -0.68
TRAF4-201ENST00000262395 A0A087X002 238 aa10.83□□□□□ -0.68
TRAF4-201ENST00000262395 NOTCH2NLQ7Z3S9 236 aa10.83□□□□□ -0.68
TRAF4-201ENST00000262395 PLECQ15149 4684 aaKnown RBP10.82□□□□□ -0.68
TRAF4-201ENST00000262395 SPAG11AQ6PDA7 123 aa10.82□□□□□ -0.68
TRAF4-201ENST00000262395 Q75L30 129 aa10.81□□□□□ -0.68
TRAF4-201ENST00000262395 NBDYA0A0U1RRE5 68 aa10.81□□□□□ -0.68
TRAF4-201ENST00000262395 MDFIQ99750 246 aa10.79□□□□□ -0.68
TRAF4-201ENST00000262395 FRAS1Q86XX4 4008 aa10.79□□□□□ -0.68
TRAF4-201ENST00000262395 A6NN06 94 aa10.77□□□□□ -0.69
TRAF4-201ENST00000262395 SPINK6Q6UWN8 80 aa10.77□□□□□ -0.69
TRAF4-201ENST00000262395 LOC101927531A0A1B0GV80 90 aa10.76□□□□□ -0.69
TRAF4-201ENST00000262395 A0A1B0GVX0 72 aa10.76□□□□□ -0.69
TRAF4-201ENST00000262395 CDK2AP2O75956 126 aa10.76□□□□□ -0.69
TRAF4-201ENST00000262395 Q6ZRN7 208 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-201ENST00000262395 SPACA4Q8TDM5 124 aa10.76□□□□□ -0.69
TRAF4-201ENST00000262395 ASB16-AS1Q495Z4 193 aa10.74□□□□□ -0.69
TRAF4-201ENST00000262395 TP53AIP1Q9HCN2 124 aa10.74□□□□□ -0.69
TRAF4-201ENST00000262395 CDC42SE1Q9NRR8 79 aa10.74□□□□□ -0.69
TRAF4-201ENST00000262395 PSORS1C2Q9UIG4 136 aa10.74□□□□□ -0.69
TRAF4-201ENST00000262395 WWC2-AS2Q96NR7 200 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms