RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 KRTAP7-1Q8IUC3 87 aa17.44■□□□□ 0.38
SMARCD3-201ENST00000262188 A0A1W2PNN7 141 aa17.42■□□□□ 0.38
SMARCD3-201ENST00000262188 EPPK1P58107 5090 aaKnown RBP17.42■□□□□ 0.38
SMARCD3-201ENST00000262188 SPACA4Q8TDM5 124 aa17.42■□□□□ 0.38
SMARCD3-201ENST00000262188 LINC00337Q8N6G1 96 aa17.41■□□□□ 0.38
SMARCD3-201ENST00000262188 TMEM256-PLSCR3K7ERE1 68 aa17.39■□□□□ 0.37
SMARCD3-201ENST00000262188 IGKV2-28A0A075B6P5 120 aa17.37■□□□□ 0.37
SMARCD3-201ENST00000262188 IGKV2D-28P01615 120 aa17.37■□□□□ 0.37
SMARCD3-201ENST00000262188 CXCL6P80162 114 aa17.37■□□□□ 0.37
SMARCD3-201ENST00000262188 VPREB1P12018 145 aa17.35■□□□□ 0.37
SMARCD3-201ENST00000262188 TRBV7-4A0A0J9YYF1 115 aa17.33■□□□□ 0.37
SMARCD3-201ENST00000262188 SNURFQ9Y675 71 aa17.33■□□□□ 0.37
SMARCD3-201ENST00000262188 Q6ZSA8 131 aa17.33■□□□□ 0.36
SMARCD3-201ENST00000262188 LOC110117498A0A087WWA1 95 aa17.28■□□□□ 0.36
SMARCD3-201ENST00000262188 SCXQ7RTU7 201 aa17.28■□□□□ 0.36
SMARCD3-201ENST00000262188 PHF5AQ7RTV0 110 aaKnown RBP17.28■□□□□ 0.36
SMARCD3-201ENST00000262188 CIRBP-AS1Q8TBR5 109 aa17.28■□□□□ 0.36
SMARCD3-201ENST00000262188 PLA2G2DQ9UNK4 145 aa17.28■□□□□ 0.36
SMARCD3-201ENST00000262188 NKAPP1Q8N9T2 125 aa17.27■□□□□ 0.36
SMARCD3-201ENST00000262188 APOBP04114 4563 aaKnown RBP17.26■□□□□ 0.35
SMARCD3-201ENST00000262188 PDE6GP18545 87 aa17.25■□□□□ 0.35
SMARCD3-201ENST00000262188 LINC01547P58512 204 aaPredicted RBP17.25■□□□□ 0.35
SMARCD3-201ENST00000262188 C7orf33Q8WU49 177 aa17.24■□□□□ 0.35
SMARCD3-201ENST00000262188 PLAC8Q9NZF1 115 aa17.24■□□□□ 0.35
SMARCD3-201ENST00000262188 RPL37AP8A6NKH3 93 aa17.22■□□□□ 0.35
SMARCD3-201ENST00000262188 IGLV5-37A0A075B6J1 123 aa17.22■□□□□ 0.35
SMARCD3-201ENST00000262188 MRPL55Q7Z7F7 128 aaKnown RBP17.21■□□□□ 0.35
SMARCD3-201ENST00000262188 KRTAP11-1Q8IUC1 163 aa17.21■□□□□ 0.35
SMARCD3-201ENST00000262188 H3BQ85 93 aa17.2■□□□□ 0.34
SMARCD3-201ENST00000262188 MPLKIPQ8TAP9 179 aa17.2■□□□□ 0.34
SMARCD3-201ENST00000262188 TMEM254Q8TBM7 123 aa17.2■□□□□ 0.34
SMARCD3-201ENST00000262188 M0R378 163 aa17.19■□□□□ 0.34
SMARCD3-201ENST00000262188 Q1T7F1 81 aa17.19■□□□□ 0.34
SMARCD3-201ENST00000262188 Q6ZQT0 140 aa17.19■□□□□ 0.34
SMARCD3-201ENST00000262188 FAM229BQ4G0N7 80 aa17.17■□□□□ 0.34
SMARCD3-201ENST00000262188 NREPQ16612 68 aa17.15■□□□□ 0.34
SMARCD3-201ENST00000262188 Q6ZVQ6 151 aa17.14■□□□□ 0.33
SMARCD3-201ENST00000262188 PRYO14603 147 aa17.12■□□□□ 0.33
SMARCD3-201ENST00000262188 IGLV6-57P01721 117 aa17.11■□□□□ 0.33
SMARCD3-201ENST00000262188 UBE2BP63146 152 aa17.11■□□□□ 0.33
SMARCD3-201ENST00000262188 IGLV1-50A0A075B6I6 118 aa17.1■□□□□ 0.33
SMARCD3-201ENST00000262188 SMR3BP02814 79 aaPredicted RBP17.08■□□□□ 0.33
SMARCD3-201ENST00000262188 KIAA1109Q2LD37 5005 aa17.03■□□□□ 0.32
SMARCD3-201ENST00000262188 HSPG2P98160 4391 aa17.02■□□□□ 0.32
SMARCD3-201ENST00000262188 RYR1P21817 5038 aa17.02■□□□□ 0.31
SMARCD3-201ENST00000262188 hDV103S1A0JD37 113 aa17.01■□□□□ 0.31
SMARCD3-201ENST00000262188 BPY2O14599 106 aa17.01■□□□□ 0.31
SMARCD3-201ENST00000262188 FAT1Q14517 4588 aa17■□□□□ 0.31
SMARCD3-201ENST00000262188 KCNQ1DNQ9H478 68 aa17■□□□□ 0.31
SMARCD3-201ENST00000262188 PSORS1C2Q9UIG4 136 aa17■□□□□ 0.31
SMARCD3-201ENST00000262188 REG3GQ6UW15 175 aa16.97■□□□□ 0.31
SMARCD3-201ENST00000262188 C6orf99Q4VX62 202 aa16.96■□□□□ 0.31
SMARCD3-201ENST00000262188 VPS13BQ7Z7G8 4022 aa16.96■□□□□ 0.31
SMARCD3-201ENST00000262188 ZNF73O43830 326 aaPredicted RBP16.95■□□□□ 0.3
SMARCD3-201ENST00000262188 CDK2AP2O75956 126 aa16.95■□□□□ 0.3
SMARCD3-201ENST00000262188 LINC00528Q8N1L1 170 aa16.93■□□□□ 0.3
SMARCD3-201ENST00000262188 OCR1Q9BZK8 76 aa16.93■□□□□ 0.3
SMARCD3-201ENST00000262188 C1orf137Q5JT78 98 aa16.92■□□□□ 0.3
SMARCD3-201ENST00000262188 KRTAP17-1Q9BYP8 105 aa16.91■□□□□ 0.3
SMARCD3-201ENST00000262188 BIRC6Q9NR09 4857 aa16.9■□□□□ 0.3
SMARCD3-201ENST00000262188 SPRR1AP35321 89 aa16.9■□□□□ 0.3
SMARCD3-201ENST00000262188 KRTAP4-16G5E9R7 235 aaPredicted RBP16.89■□□□□ 0.3
SMARCD3-201ENST00000262188 LINC00575Q6W349 94 aa16.89■□□□□ 0.3
SMARCD3-201ENST00000262188 DIRC1Q969H9 104 aa16.89■□□□□ 0.3
SMARCD3-201ENST00000262188 PRLHP81277 87 aa16.89■□□□□ 0.29
SMARCD3-201ENST00000262188 KTN1-AS1Q86SY8 53 aa16.88■□□□□ 0.29
SMARCD3-201ENST00000262188 ETDCA0A1B0GVM5 59 aa16.86■□□□□ 0.29
SMARCD3-201ENST00000262188 RPL37AP61513 92 aaKnown RBP16.82■□□□□ 0.28
SMARCD3-201ENST00000262188 COX7BP24311 80 aa16.8■□□□□ 0.28
SMARCD3-201ENST00000262188 NDUFS5O43920 106 aa16.8■□□□□ 0.28
SMARCD3-201ENST00000262188 UBE2AP49459 152 aa16.8■□□□□ 0.28
SMARCD3-201ENST00000262188 SRRM2Q9UQ35 2752 aaKnown RBP16.8■□□□□ 0.28
SMARCD3-201ENST00000262188 ELOF1P60002 83 aaKnown RBP16.79■□□□□ 0.28
SMARCD3-201ENST00000262188 Q6ZRX8 168 aa16.78■□□□□ 0.28
SMARCD3-201ENST00000262188 Q9BRP9 147 aa16.78■□□□□ 0.28
SMARCD3-201ENST00000262188 CYP4F30PQ9H0H9 118 aa16.78■□□□□ 0.28
SMARCD3-201ENST00000262188 IGLV7-43P04211 117 aa16.77■□□□□ 0.28
SMARCD3-201ENST00000262188 KRTAP13-1Q8IUC0 172 aa16.77■□□□□ 0.27
SMARCD3-201ENST00000262188 TRAV22A0A0B4J277 110 aa16.76■□□□□ 0.27
SMARCD3-201ENST00000262188 KRTAP10-4P60372 401 aaPredicted RBP16.76■□□□□ 0.27
SMARCD3-201ENST00000262188 HIGD2AQ9BW72 106 aa16.75■□□□□ 0.27
SMARCD3-201ENST00000262188 RBM12B-AS1Q9P1G2 102 aa16.75■□□□□ 0.27
SMARCD3-201ENST00000262188 C1orf64Q8NEQ6 169 aa16.73■□□□□ 0.27
SMARCD3-201ENST00000262188 Q5VSD8 79 aa16.73■□□□□ 0.27
SMARCD3-201ENST00000262188 IGKV4-1P06312 121 aa16.71■□□□□ 0.27
SMARCD3-201ENST00000262188 FAM229AH3BQW9 127 aa16.69■□□□□ 0.26
SMARCD3-201ENST00000262188 ZNF861PO60384 105 aa16.69■□□□□ 0.26
SMARCD3-201ENST00000262188 H0Y9J4 135 aa16.66■□□□□ 0.26
SMARCD3-201ENST00000262188 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.66■□□□□ 0.26
SMARCD3-201ENST00000262188 C4orf48Q5BLP8 95 aa16.65■□□□□ 0.26
SMARCD3-201ENST00000262188 Q8N1X5 172 aa16.65■□□□□ 0.26
SMARCD3-201ENST00000262188 ST20-AS1Q8NBB2 130 aa16.64■□□□□ 0.25
SMARCD3-201ENST00000262188 ZCCHC13Q8WW36 166 aaKnown RBP16.63■□□□□ 0.25
SMARCD3-201ENST00000262188 ATP11AUNQ6ZP68 121 aa16.62■□□□□ 0.25
SMARCD3-201ENST00000262188 PSPHP1O15172 72 aa16.62■□□□□ 0.25
SMARCD3-201ENST00000262188 PLA2G1BP04054 148 aaKnown RBP16.62■□□□□ 0.25
SMARCD3-201ENST00000262188 DHRS4-AS1Q9P1J3 65 aa16.61■□□□□ 0.25
SMARCD3-201ENST00000262188 Q6ZQY7 126 aa16.57■□□□□ 0.24
SMARCD3-201ENST00000262188 KRTAP4-5Q9BYR2 181 aa16.57■□□□□ 0.24
SMARCD3-201ENST00000262188 HERC2O95714 4834 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms