RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 KRTAP1-5Q9BYS1 174 aa12.18□□□□□ -0.46
SCARB1-201ENST00000261693 TENM2Q9NT68 2774 aa12.18□□□□□ -0.46
SCARB1-201ENST00000261693 A0A087WSZ3 146 aa12.17□□□□□ -0.46
SCARB1-201ENST00000261693 MGAM2Q2M2H8 2515 aa12.17□□□□□ -0.46
SCARB1-201ENST00000261693 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.16□□□□□ -0.46
SCARB1-201ENST00000261693 WFDC13Q8IUB5 93 aa12.16□□□□□ -0.46
SCARB1-201ENST00000261693 PRO0628Q9UI54 55 aa12.16□□□□□ -0.46
SCARB1-201ENST00000261693 LRCOL1A6NCL2 159 aa12.16□□□□□ -0.46
SCARB1-201ENST00000261693 DNAH9Q9NYC9 4486 aa12.15□□□□□ -0.46
SCARB1-201ENST00000261693 COL7A1Q02388 2944 aa12.15□□□□□ -0.46
SCARB1-201ENST00000261693 C16orf90A8MZG2 172 aa12.14□□□□□ -0.47
SCARB1-201ENST00000261693 RPL37AP61513 92 aaKnown RBP12.14□□□□□ -0.47
SCARB1-201ENST00000261693 ZCCHC13Q8WW36 166 aaKnown RBP12.13□□□□□ -0.47
SCARB1-201ENST00000261693 PRR4Q16378 134 aa12.12□□□□□ -0.47
SCARB1-201ENST00000261693 K7EIL1 84 aa12.12□□□□□ -0.47
SCARB1-201ENST00000261693 CHTF8P0CG12 524 aa12.12□□□□□ -0.47
SCARB1-201ENST00000261693 KRTAP11-1Q8IUC1 163 aa12.12□□□□□ -0.47
SCARB1-201ENST00000261693 UBE2AP49459 152 aa12.11□□□□□ -0.47
SCARB1-201ENST00000261693 BRK1Q8WUW1 75 aa12.1□□□□□ -0.47
SCARB1-201ENST00000261693 PHF5AQ7RTV0 110 aaKnown RBP12.09□□□□□ -0.47
SCARB1-201ENST00000261693 C1orf64Q8NEQ6 169 aa12.09□□□□□ -0.47
SCARB1-201ENST00000261693 hDV103S1A0JD37 113 aa12.09□□□□□ -0.47
SCARB1-201ENST00000261693 IGLV8-61A0A075B6I0 122 aa12.07□□□□□ -0.48
SCARB1-201ENST00000261693 CNBPP62633 177 aaKnown RBP12.07□□□□□ -0.48
SCARB1-201ENST00000261693 DNAH7Q8WXX0 4024 aa12.06□□□□□ -0.48
SCARB1-201ENST00000261693 UBE2DNLQ8IWF7 75 aa12.03□□□□□ -0.48
SCARB1-201ENST00000261693 PKIGQ9Y2B9 76 aa12□□□□□ -0.49
SCARB1-201ENST00000261693 LINC00208Q96KT6 92 aa11.99□□□□□ -0.49
SCARB1-201ENST00000261693 MP68P56378 58 aa11.98□□□□□ -0.49
SCARB1-201ENST00000261693 KRTAP29-1A8MX34 341 aaPredicted RBP11.97□□□□□ -0.49
SCARB1-201ENST00000261693 CASC2Q6XLA1 102 aa11.97□□□□□ -0.49
SCARB1-201ENST00000261693 PRR15Q8IV56 129 aa11.94□□□□□ -0.5
SCARB1-201ENST00000261693 TRAV22A0A0B4J277 110 aa11.94□□□□□ -0.5
SCARB1-201ENST00000261693 NDUFB1O75438 58 aa11.92□□□□□ -0.5
SCARB1-201ENST00000261693 CYP4F30PQ9H0H9 118 aa11.92□□□□□ -0.5
SCARB1-201ENST00000261693 LINC00472Q9H8W2 130 aa11.92□□□□□ -0.5
SCARB1-201ENST00000261693 H0Y9P7 68 aa11.92□□□□□ -0.5
SCARB1-201ENST00000261693 SPRR1BP22528 89 aa11.92□□□□□ -0.5
SCARB1-201ENST00000261693 PANO1I0J062 215 aa11.91□□□□□ -0.5
SCARB1-201ENST00000261693 C14orf177Q52M58 125 aa11.91□□□□□ -0.5
SCARB1-201ENST00000261693 APLNQ9ULZ1 77 aa11.91□□□□□ -0.5
SCARB1-201ENST00000261693 A8MWP4 228 aa11.9□□□□□ -0.5
SCARB1-201ENST00000261693 H0Y9J4 135 aa11.9□□□□□ -0.5
SCARB1-201ENST00000261693 PSPHP1O15172 72 aa11.9□□□□□ -0.5
SCARB1-201ENST00000261693 Q1T7F1 81 aa11.9□□□□□ -0.51
SCARB1-201ENST00000261693 B9D2Q9BPU9 175 aa11.89□□□□□ -0.51
SCARB1-201ENST00000261693 C9orf163Q8N9P6 203 aa11.89□□□□□ -0.51
SCARB1-201ENST00000261693 PLECQ15149 4684 aaKnown RBP11.86□□□□□ -0.51
SCARB1-201ENST00000261693 IGLV9-49A0A0B4J1Y8 123 aa11.84□□□□□ -0.51
SCARB1-201ENST00000261693 MMP24-AS1A0A0U1RRL7 71 aa11.8□□□□□ -0.52
SCARB1-201ENST00000261693 KRTAP13-1Q8IUC0 172 aa11.79□□□□□ -0.52
SCARB1-201ENST00000261693 DYNC2H1Q8NCM8 4307 aaKnown RBP11.78□□□□□ -0.52
SCARB1-201ENST00000261693 NBDYA0A0U1RRE5 68 aa11.78□□□□□ -0.52
SCARB1-201ENST00000261693 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.77□□□□□ -0.52
SCARB1-201ENST00000261693 A8MUN3 132 aa11.76□□□□□ -0.53
SCARB1-201ENST00000261693 H3BPC8 53 aa11.76□□□□□ -0.53
SCARB1-201ENST00000261693 SPANXA2-OT1Q8N9U9 137 aa11.75□□□□□ -0.53
SCARB1-201ENST00000261693 C1orf195Q5TG92 126 aa11.74□□□□□ -0.53
SCARB1-201ENST00000261693 MDFIQ99750 246 aa11.74□□□□□ -0.53
SCARB1-201ENST00000261693 Q96NJ1 140 aa11.73□□□□□ -0.53
SCARB1-201ENST00000261693 Q6ZRN7 208 aaPredicted RBP11.73□□□□□ -0.53
SCARB1-201ENST00000261693 FRAS1Q86XX4 4008 aa11.73□□□□□ -0.53
SCARB1-201ENST00000261693 PCOTHQ58A44 107 aa11.7□□□□□ -0.54
SCARB1-201ENST00000261693 SPACA4Q8TDM5 124 aa11.7□□□□□ -0.54
SCARB1-201ENST00000261693 MOBPQ13875 183 aa11.69□□□□□ -0.54
SCARB1-201ENST00000261693 ANAPC11Q9NYG5 84 aa11.69□□□□□ -0.54
SCARB1-201ENST00000261693 HECTD4Q9Y4D8 3996 aa11.68□□□□□ -0.54
SCARB1-201ENST00000261693 STARD9Q9P2P6 4700 aa11.66□□□□□ -0.54
SCARB1-201ENST00000261693 IGHV6-1A0A0B4J1U7 121 aa11.66□□□□□ -0.54
SCARB1-201ENST00000261693 V9GYY9 64 aa11.66□□□□□ -0.54
SCARB1-201ENST00000261693 Q8N9P0 234 aaPredicted RBP11.65□□□□□ -0.54
SCARB1-201ENST00000261693 NDUFS5O43920 106 aa11.65□□□□□ -0.54
SCARB1-201ENST00000261693 Q5VV11 94 aa11.65□□□□□ -0.54
SCARB1-201ENST00000261693 C8orf17Q9NRJ1 99 aa11.64□□□□□ -0.55
SCARB1-201ENST00000261693 A8MU10 97 aa11.64□□□□□ -0.55
SCARB1-201ENST00000261693 COA5Q86WW8 74 aa11.62□□□□□ -0.55
SCARB1-201ENST00000261693 ASB16-AS1Q495Z4 193 aa11.61□□□□□ -0.55
SCARB1-201ENST00000261693 LINC00483Q53H64 154 aa11.61□□□□□ -0.55
SCARB1-201ENST00000261693 IGLV7-46A0A075B6I9 117 aa11.61□□□□□ -0.55
SCARB1-201ENST00000261693 CD164Q04900 197 aa11.61□□□□□ -0.55
SCARB1-201ENST00000261693 PSORS1C2Q9UIG4 136 aa11.61□□□□□ -0.55
SCARB1-201ENST00000261693 WWC2-AS2Q96NR7 200 aa11.6□□□□□ -0.55
SCARB1-201ENST00000261693 PRR15LQ9BU68 103 aa11.6□□□□□ -0.55
SCARB1-201ENST00000261693 KMT2AQ03164 3969 aa11.59□□□□□ -0.55
SCARB1-201ENST00000261693 DNAH8Q96JB1 4490 aa11.59□□□□□ -0.55
SCARB1-201ENST00000261693 NUPR2A6NF83 97 aa11.59□□□□□ -0.55
SCARB1-201ENST00000261693 TP53AIP1Q9HCN2 124 aa11.59□□□□□ -0.55
SCARB1-201ENST00000261693 A0A087WTM6 91 aa11.58□□□□□ -0.56
SCARB1-201ENST00000261693 A0A1B0GVX0 72 aa11.58□□□□□ -0.56
SCARB1-201ENST00000261693 CHKB-CPT1BH3BT56 60 aa11.58□□□□□ -0.56
SCARB1-201ENST00000261693 A0A087X002 238 aa11.57□□□□□ -0.56
SCARB1-201ENST00000261693 NOTCH2NLQ7Z3S9 236 aa11.57□□□□□ -0.56
SCARB1-201ENST00000261693 CDK2AP2O75956 126 aa11.56□□□□□ -0.56
SCARB1-201ENST00000261693 LIMD2Q9BT23 127 aa11.56□□□□□ -0.56
SCARB1-201ENST00000261693 VPS13DQ5THJ4 4388 aa11.55□□□□□ -0.56
SCARB1-201ENST00000261693 TGP01266 2768 aa11.55□□□□□ -0.56
SCARB1-201ENST00000261693 IGLV5-52A0A0A0MRZ9 124 aa11.55□□□□□ -0.56
SCARB1-201ENST00000261693 RTL8CO15255 209 aa11.55□□□□□ -0.56
SCARB1-201ENST00000261693 ZNF706Q9Y5V0 76 aaPredicted RBP11.55□□□□□ -0.56
SCARB1-201ENST00000261693 Q6ZR54 194 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms