RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 KRTAP1-1Q07627 177 aa10.57□□□□□ -0.72
SREBF1-201ENST00000261646 BAHCC1Q9P281 2608 aa10.57□□□□□ -0.72
SREBF1-201ENST00000261646 PHF5AQ7RTV0 110 aaKnown RBP10.57□□□□□ -0.72
SREBF1-201ENST00000261646 IGLV5-48A0A075B6I7 105 aa10.56□□□□□ -0.72
SREBF1-201ENST00000261646 CYP4F30PQ9H0H9 118 aa10.55□□□□□ -0.72
SREBF1-201ENST00000261646 A8MWP4 228 aa10.55□□□□□ -0.72
SREBF1-201ENST00000261646 CD164Q04900 197 aa10.54□□□□□ -0.72
SREBF1-201ENST00000261646 PRR15Q8IV56 129 aa10.53□□□□□ -0.72
SREBF1-201ENST00000261646 CHTF8P0CG12 524 aa10.53□□□□□ -0.72
SREBF1-201ENST00000261646 LINC00588Q9Y4M8 146 aa10.52□□□□□ -0.72
SREBF1-201ENST00000261646 LOC101927531A0A1B0GV80 90 aa10.51□□□□□ -0.73
SREBF1-201ENST00000261646 SPINK1P00995 79 aa10.51□□□□□ -0.73
SREBF1-201ENST00000261646 DSCR10P59022 87 aa10.51□□□□□ -0.73
SREBF1-201ENST00000261646 Q1T7F1 81 aa10.51□□□□□ -0.73
SREBF1-201ENST00000261646 NIPBLQ6KC79 2804 aaeCLIP10.5□□□□□ -0.73
SREBF1-201ENST00000261646 A0A1B0GU69 56 aa10.49□□□□□ -0.73
SREBF1-201ENST00000261646 DNAH10OSP0CZ25 163 aa10.49□□□□□ -0.73
SREBF1-201ENST00000261646 MOBPQ13875 183 aa10.49□□□□□ -0.73
SREBF1-201ENST00000261646 ATP11AUNQ6ZP68 121 aa10.49□□□□□ -0.73
SREBF1-201ENST00000261646 C16orf90A8MZG2 172 aa10.48□□□□□ -0.73
SREBF1-201ENST00000261646 KRTAP24-1Q3LI83 254 aa10.47□□□□□ -0.73
SREBF1-201ENST00000261646 ACYP2P14621 99 aa10.46□□□□□ -0.74
SREBF1-201ENST00000261646 KTN1-AS1Q86SY8 53 aa10.46□□□□□ -0.74
SREBF1-201ENST00000261646 K7ERS5 55 aa10.45□□□□□ -0.74
SREBF1-201ENST00000261646 CASC10Q5T4H9 136 aa10.43□□□□□ -0.74
SREBF1-201ENST00000261646 KRTAP10-11P60412 298 aa10.42□□□□□ -0.74
SREBF1-201ENST00000261646 IGKV2D-30A0A075B6S6 120 aa10.41□□□□□ -0.74
SREBF1-201ENST00000261646 IGKV2-30P06310 120 aa10.41□□□□□ -0.74
SREBF1-201ENST00000261646 TLX1NBP0CAT3 122 aa10.4□□□□□ -0.74
SREBF1-201ENST00000261646 SPRR4Q96PI1 79 aa10.4□□□□□ -0.74
SREBF1-201ENST00000261646 SPANXA2-OT1Q8N9U9 137 aa10.4□□□□□ -0.74
SREBF1-201ENST00000261646 PLA2G2DQ9UNK4 145 aa10.39□□□□□ -0.75
SREBF1-201ENST00000261646 MRPL34Q9BQ48 92 aaKnown RBP10.37□□□□□ -0.75
SREBF1-201ENST00000261646 IGLV8-61A0A075B6I0 122 aa10.36□□□□□ -0.75
SREBF1-201ENST00000261646 C8orf17Q9NRJ1 99 aa10.36□□□□□ -0.75
SREBF1-201ENST00000261646 C8orf87E5RJ46 101 aa10.34□□□□□ -0.75
SREBF1-201ENST00000261646 C7orf65Q6ZTY9 151 aa10.34□□□□□ -0.75
SREBF1-201ENST00000261646 Q8N9P0 234 aaPredicted RBP10.32□□□□□ -0.76
SREBF1-201ENST00000261646 CDC42SE1Q9NRR8 79 aa10.3□□□□□ -0.76
SREBF1-201ENST00000261646 CSMD2Q7Z408 3487 aa10.3□□□□□ -0.76
SREBF1-201ENST00000261646 IGLV5-52A0A0A0MRZ9 124 aa10.29□□□□□ -0.76
SREBF1-201ENST00000261646 PRR26Q8N8Z3 221 aa10.28□□□□□ -0.76
SREBF1-201ENST00000261646 Q5VV11 94 aa10.27□□□□□ -0.77
SREBF1-201ENST00000261646 RBM12B-AS1Q9P1G2 102 aa10.26□□□□□ -0.77
SREBF1-201ENST00000261646 A0A1B0GVX0 72 aa10.26□□□□□ -0.77
SREBF1-201ENST00000261646 IGLV5-37A0A075B6J1 123 aa10.26□□□□□ -0.77
SREBF1-201ENST00000261646 LCA10Q71F78 164 aa10.26□□□□□ -0.77
SREBF1-201ENST00000261646 KMT2BQ9UMN6 2715 aaPredicted RBP10.25□□□□□ -0.77
SREBF1-201ENST00000261646 LY6G6CO95867 125 aa10.25□□□□□ -0.77
SREBF1-201ENST00000261646 STAB2Q8WWQ8 2551 aa10.24□□□□□ -0.77
SREBF1-201ENST00000261646 NUPR2A6NF83 97 aa10.24□□□□□ -0.77
SREBF1-201ENST00000261646 MDFIQ99750 246 aa10.23□□□□□ -0.77
SREBF1-201ENST00000261646 LINC00313P59037 77 aa10.23□□□□□ -0.77
SREBF1-201ENST00000261646 UQCR11O14957 56 aa10.22□□□□□ -0.77
SREBF1-201ENST00000261646 ANAPC11Q9NYG5 84 aa10.22□□□□□ -0.77
SREBF1-201ENST00000261646 CNBPP62633 177 aaKnown RBP10.22□□□□□ -0.77
SREBF1-201ENST00000261646 SPACA4Q8TDM5 124 aa10.22□□□□□ -0.77
SREBF1-201ENST00000261646 BSNQ9UPA5 3926 aa10.21□□□□□ -0.77
SREBF1-201ENST00000261646 IGLV7-46A0A075B6I9 117 aa10.21□□□□□ -0.77
SREBF1-201ENST00000261646 SPRR1AP35321 89 aa10.2□□□□□ -0.78
SREBF1-201ENST00000261646 Q75L30 129 aa10.2□□□□□ -0.78
SREBF1-201ENST00000261646 FAM229AH3BQW9 127 aa10.18□□□□□ -0.78
SREBF1-201ENST00000261646 K7EIL1 84 aa10.18□□□□□ -0.78
SREBF1-201ENST00000261646 VWFP04275 2813 aa10.17□□□□□ -0.78
SREBF1-201ENST00000261646 MIR22HGQ0VDD5 57 aa10.17□□□□□ -0.78
SREBF1-201ENST00000261646 NBDYA0A0U1RRE5 68 aa10.17□□□□□ -0.78
SREBF1-201ENST00000261646 C9orf163Q8N9P6 203 aa10.15□□□□□ -0.78
SREBF1-201ENST00000261646 TENM1Q9UKZ4 2725 aa10.15□□□□□ -0.79
SREBF1-201ENST00000261646 KRTAP26-1Q6PEX3 210 aa10.14□□□□□ -0.79
SREBF1-201ENST00000261646 TNP2Q05952 138 aa10.13□□□□□ -0.79
SREBF1-201ENST00000261646 MMP24-AS1A0A0U1RRL7 71 aa10.11□□□□□ -0.79
SREBF1-201ENST00000261646 C1orf134Q5TEV5 83 aa10.11□□□□□ -0.79
SREBF1-201ENST00000261646 RTL8CO15255 209 aa10.11□□□□□ -0.79
SREBF1-201ENST00000261646 ZCCHC13Q8WW36 166 aaKnown RBP10.11□□□□□ -0.79
SREBF1-201ENST00000261646 LINC01558Q9Y6Z2 57 aa10.1□□□□□ -0.79
SREBF1-201ENST00000261646 FBN1P35555 2871 aaKnown RBP10.09□□□□□ -0.79
SREBF1-201ENST00000261646 PDZD2O15018 2839 aa10.08□□□□□ -0.8
SREBF1-201ENST00000261646 PRAC1Q96KF2 57 aa10.07□□□□□ -0.8
SREBF1-201ENST00000261646 LINC00472Q9H8W2 130 aa10.07□□□□□ -0.8
SREBF1-201ENST00000261646 SPINK7P58062 85 aa10.07□□□□□ -0.8
SREBF1-201ENST00000261646 ZNF861PO60384 105 aa10.06□□□□□ -0.8
SREBF1-201ENST00000261646 NBPF19A0A087WUL8 3843 aa10.05□□□□□ -0.8
SREBF1-201ENST00000261646 TENM4Q6N022 2769 aa10.04□□□□□ -0.8
SREBF1-201ENST00000261646 HRES1P13985 223 aa10.04□□□□□ -0.8
SREBF1-201ENST00000261646 TENM3Q9P273 2699 aa10.04□□□□□ -0.8
SREBF1-201ENST00000261646 KRTAP4-16G5E9R7 235 aaPredicted RBP10.02□□□□□ -0.8
SREBF1-201ENST00000261646 PSORS1C2Q9UIG4 136 aa10.02□□□□□ -0.8
SREBF1-201ENST00000261646 Q96NJ1 140 aa10.01□□□□□ -0.81
SREBF1-201ENST00000261646 A8MU10 97 aa10□□□□□ -0.81
SREBF1-201ENST00000261646 OTOGQ6ZRI0 2925 aa10□□□□□ -0.81
SREBF1-201ENST00000261646 VPS13CQ709C8 3753 aa9.98□□□□□ -0.81
SREBF1-201ENST00000261646 KRTAP29-1A8MX34 341 aaPredicted RBP9.97□□□□□ -0.81
SREBF1-201ENST00000261646 SSBP3-AS1Q7Z2R9 100 aa9.96□□□□□ -0.81
SREBF1-201ENST00000261646 ZFHX3Q15911 3703 aa9.95□□□□□ -0.82
SREBF1-201ENST00000261646 LCE6AA0A183 80 aa9.94□□□□□ -0.82
SREBF1-201ENST00000261646 LINC01554Q52M75 96 aa9.93□□□□□ -0.82
SREBF1-201ENST00000261646 SPRR1BP22528 89 aa9.93□□□□□ -0.82
SREBF1-201ENST00000261646 A0A087WTM6 91 aa9.92□□□□□ -0.82
SREBF1-201ENST00000261646 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
SREBF1-201ENST00000261646 TYMSOSQ8TAI1 123 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms