RNA–Protein interactions for RNA: ENST00000255476.2

RFXAP-201, Transcript of regulatory factor X associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFXAP, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-201ENST00000255476 DNAH5Q8TE73 4624 aa13.24□□□□□ -0.29
RFXAP-201ENST00000255476 FAM19A1Q7Z5A9 133 aa13.23□□□□□ -0.29
RFXAP-201ENST00000255476 H7BZZ5 65 aa13.23□□□□□ -0.29
RFXAP-201ENST00000255476 PRLHP81277 87 aa13.2□□□□□ -0.3
RFXAP-201ENST00000255476 ERC2-IT1O76042 136 aa13.19□□□□□ -0.3
RFXAP-201ENST00000255476 PKD1P98161 4303 aa13.19□□□□□ -0.3
RFXAP-201ENST00000255476 DHRS4-AS1Q9P1J3 65 aa13.19□□□□□ -0.3
RFXAP-201ENST00000255476 DEFB105AQ8NG35 78 aa13.18□□□□□ -0.3
RFXAP-201ENST00000255476 LAMTOR3Q9UHA4 124 aa13.18□□□□□ -0.3
RFXAP-201ENST00000255476 DNAH8Q96JB1 4490 aa13.17□□□□□ -0.3
RFXAP-201ENST00000255476 JMJD7-PLA2G4BH0Y9G9 81 aa13.17□□□□□ -0.3
RFXAP-201ENST00000255476 ST20-AS1Q8NBB2 130 aa13.17□□□□□ -0.3
RFXAP-201ENST00000255476 LCE6AA0A183 80 aa13.16□□□□□ -0.3
RFXAP-201ENST00000255476 BCE1O60756 84 aa13.16□□□□□ -0.3
RFXAP-201ENST00000255476 SRRM2Q9UQ35 2752 aaKnown RBP13.15□□□□□ -0.3
RFXAP-201ENST00000255476 KLKP1Q107X0 134 aa13.14□□□□□ -0.31
RFXAP-201ENST00000255476 TRAV7A0A075B6U4 112 aa13.14□□□□□ -0.31
RFXAP-201ENST00000255476 FP248Q71RG6 208 aaPredicted RBP13.13□□□□□ -0.31
RFXAP-201ENST00000255476 LINC01547P58512 204 aaPredicted RBP13.12□□□□□ -0.31
RFXAP-201ENST00000255476 PLAC8Q9NZF1 115 aa13.12□□□□□ -0.31
RFXAP-201ENST00000255476 Q8N377 158 aa13.12□□□□□ -0.31
RFXAP-201ENST00000255476 FAM30AQ9NZY2 134 aa13.12□□□□□ -0.31
RFXAP-201ENST00000255476 HIGD2AQ9BW72 106 aa13.11□□□□□ -0.31
RFXAP-201ENST00000255476 UBL5Q9BZL1 73 aa13.11□□□□□ -0.31
RFXAP-201ENST00000255476 SMIM26A0A096LP01 95 aa13.1□□□□□ -0.31
RFXAP-201ENST00000255476 H3BQ85 93 aa13.1□□□□□ -0.31
RFXAP-201ENST00000255476 RBM3P98179 157 aaKnown RBP13.1□□□□□ -0.31
RFXAP-201ENST00000255476 KMT2CQ8NEZ4 4911 aaKnown RBP13.09□□□□□ -0.31
RFXAP-201ENST00000255476 KRTAP10-1P60331 282 aa13.07□□□□□ -0.32
RFXAP-201ENST00000255476 UBE2AP49459 152 aa13.06□□□□□ -0.32
RFXAP-201ENST00000255476 RYR2Q92736 4967 aa13.04□□□□□ -0.32
RFXAP-201ENST00000255476 IGLV5-48A0A075B6I7 105 aa13.04□□□□□ -0.32
RFXAP-201ENST00000255476 HAMPP81172 84 aa13.04□□□□□ -0.32
RFXAP-201ENST00000255476 CIRBP-AS1Q8TBR5 109 aa13.02□□□□□ -0.32
RFXAP-201ENST00000255476 PSORS1C2Q9UIG4 136 aa13.02□□□□□ -0.32
RFXAP-201ENST00000255476 SNURFQ9Y675 71 aa13.02□□□□□ -0.32
RFXAP-201ENST00000255476 H0Y9J4 135 aa13.02□□□□□ -0.33
RFXAP-201ENST00000255476 F8WEM9 126 aa13.01□□□□□ -0.33
RFXAP-201ENST00000255476 Q6ZQT0 140 aa13.01□□□□□ -0.33
RFXAP-201ENST00000255476 KRTAP13-1Q8IUC0 172 aa13□□□□□ -0.33
RFXAP-201ENST00000255476 PKHD1P08F94 4074 aa13□□□□□ -0.33
RFXAP-201ENST00000255476 LOC110117498A0A087WWA1 95 aa12.99□□□□□ -0.33
RFXAP-201ENST00000255476 SCXQ7RTU7 201 aa12.98□□□□□ -0.33
RFXAP-201ENST00000255476 TRBV7-4A0A0J9YYF1 115 aa12.97□□□□□ -0.33
RFXAP-201ENST00000255476 Q6ZSA8 131 aa12.97□□□□□ -0.33
RFXAP-201ENST00000255476 C1orf137Q5JT78 98 aa12.97□□□□□ -0.33
RFXAP-201ENST00000255476 NDUFC1O43677 76 aa12.96□□□□□ -0.34
RFXAP-201ENST00000255476 SMIM29Q86T20 159 aa12.96□□□□□ -0.34
RFXAP-201ENST00000255476 ATP5EP56381 51 aaPredicted RBP12.95□□□□□ -0.34
RFXAP-201ENST00000255476 Q6ZVQ6 151 aa12.94□□□□□ -0.34
RFXAP-201ENST00000255476 CXCL6P80162 114 aa12.93□□□□□ -0.34
RFXAP-201ENST00000255476 LRP1BQ9NZR2 4599 aa12.91□□□□□ -0.34
RFXAP-201ENST00000255476 PDE6GP18545 87 aa12.9□□□□□ -0.34
RFXAP-201ENST00000255476 BRK1Q8WUW1 75 aa12.89□□□□□ -0.35
RFXAP-201ENST00000255476 A0A0G2JQZ4 141 aa12.87□□□□□ -0.35
RFXAP-201ENST00000255476 A0A1B0GVY2 172 aa12.87□□□□□ -0.35
RFXAP-201ENST00000255476 C1orf195Q5TG92 126 aa12.86□□□□□ -0.35
RFXAP-201ENST00000255476 ZNF861PO60384 105 aa12.85□□□□□ -0.35
RFXAP-201ENST00000255476 SEC61GP60059 68 aa12.85□□□□□ -0.35
RFXAP-201ENST00000255476 SPRR1BP22528 89 aa12.84□□□□□ -0.35
RFXAP-201ENST00000255476 V9GYY9 64 aa12.84□□□□□ -0.35
RFXAP-201ENST00000255476 DYNC1H1Q14204 4646 aaKnown RBP12.84□□□□□ -0.35
RFXAP-201ENST00000255476 IGLV7-43P04211 117 aa12.83□□□□□ -0.36
RFXAP-201ENST00000255476 FAM229BQ4G0N7 80 aa12.83□□□□□ -0.36
RFXAP-201ENST00000255476 A0A0U1RQV1 116 aa12.83□□□□□ -0.36
RFXAP-201ENST00000255476 SPRR4Q96PI1 79 aa12.81□□□□□ -0.36
RFXAP-201ENST00000255476 A0A1W2PNM2 257 aa12.8□□□□□ -0.36
RFXAP-201ENST00000255476 TMEM254Q8TBM7 123 aa12.8□□□□□ -0.36
RFXAP-201ENST00000255476 NREPQ16612 68 aa12.8□□□□□ -0.36
RFXAP-201ENST00000255476 RYR3Q15413 4870 aa12.78□□□□□ -0.36
RFXAP-201ENST00000255476 IGFL1Q6UW32 110 aa12.78□□□□□ -0.36
RFXAP-201ENST00000255476 ANAPC11Q9NYG5 84 aa12.78□□□□□ -0.36
RFXAP-201ENST00000255476 IGLV8-61A0A075B6I0 122 aa12.75□□□□□ -0.37
RFXAP-201ENST00000255476 Q8NBF4 154 aa12.74□□□□□ -0.37
RFXAP-201ENST00000255476 MPLKIPQ8TAP9 179 aa12.74□□□□□ -0.37
RFXAP-201ENST00000255476 VPS13BQ7Z7G8 4022 aa12.74□□□□□ -0.37
RFXAP-201ENST00000255476 BPY2O14599 106 aa12.74□□□□□ -0.37
RFXAP-201ENST00000255476 IGLV9-49A0A0B4J1Y8 123 aa12.72□□□□□ -0.37
RFXAP-201ENST00000255476 LINC00483Q53H64 154 aa12.72□□□□□ -0.37
RFXAP-201ENST00000255476 ZNF706Q9Y5V0 76 aaPredicted RBP12.72□□□□□ -0.37
RFXAP-201ENST00000255476 OCR1Q9BZK8 76 aa12.69□□□□□ -0.38
RFXAP-201ENST00000255476 APOBP04114 4563 aaKnown RBP12.67□□□□□ -0.38
RFXAP-201ENST00000255476 SMR3BP02814 79 aaPredicted RBP12.65□□□□□ -0.38
RFXAP-201ENST00000255476 IGKV4-1P06312 121 aa12.63□□□□□ -0.39
RFXAP-201ENST00000255476 MOBPQ13875 183 aa12.62□□□□□ -0.39
RFXAP-201ENST00000255476 PRR15Q8IV56 129 aa12.61□□□□□ -0.39
RFXAP-201ENST00000255476 A0A087WSZ3 146 aa12.6□□□□□ -0.39
RFXAP-201ENST00000255476 A0A1B0GW54 56 aa12.6□□□□□ -0.39
RFXAP-201ENST00000255476 Q8N9L7 120 aa12.6□□□□□ -0.39
RFXAP-201ENST00000255476 FAT1Q14517 4588 aa12.58□□□□□ -0.4
RFXAP-201ENST00000255476 RPL37AP61513 92 aaKnown RBP12.56□□□□□ -0.4
RFXAP-201ENST00000255476 hDV103S1A0JD37 113 aa12.56□□□□□ -0.4
RFXAP-201ENST00000255476 Q1T7F1 81 aa12.53□□□□□ -0.4
RFXAP-201ENST00000255476 PMAIP1Q13794 54 aa12.53□□□□□ -0.4
RFXAP-201ENST00000255476 A0A087X002 238 aa12.52□□□□□ -0.41
RFXAP-201ENST00000255476 DEFB116Q30KQ4 102 aa12.5□□□□□ -0.41
RFXAP-201ENST00000255476 KRTAP1-4P0C5Y4 121 aa12.49□□□□□ -0.41
RFXAP-201ENST00000255476 KRTAP13-2Q52LG2 175 aa12.46□□□□□ -0.41
RFXAP-201ENST00000255476 C1orf64Q8NEQ6 169 aa12.45□□□□□ -0.42
RFXAP-201ENST00000255476 KRTAP10-4P60372 401 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms