RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 IGKV4-1P06312 121 aa15.62■□□□□ 0.09
TMEM55B-201ENST00000250489 UBE2AP49459 152 aa15.62■□□□□ 0.09
TMEM55B-201ENST00000250489 IGFL1Q6UW32 110 aa15.61■□□□□ 0.09
TMEM55B-201ENST00000250489 CYSTM1Q9H1C7 97 aa15.6■□□□□ 0.09
TMEM55B-201ENST00000250489 SPRR1BP22528 89 aa15.59■□□□□ 0.09
TMEM55B-201ENST00000250489 TRAV7A0A075B6U4 112 aa15.58■□□□□ 0.09
TMEM55B-201ENST00000250489 A0A0G2JQZ4 141 aa15.58■□□□□ 0.08
TMEM55B-201ENST00000250489 SMIM20Q8N5G0 67 aa15.58■□□□□ 0.08
TMEM55B-201ENST00000250489 RTL8CO15255 209 aa15.57■□□□□ 0.08
TMEM55B-201ENST00000250489 KRTAP13-1Q8IUC0 172 aa15.56■□□□□ 0.08
TMEM55B-201ENST00000250489 DNAH2Q9P225 4427 aa15.53■□□□□ 0.08
TMEM55B-201ENST00000250489 DNAH17Q9UFH2 4485 aa15.51■□□□□ 0.07
TMEM55B-201ENST00000250489 KMT2AQ03164 3969 aa15.51■□□□□ 0.07
TMEM55B-201ENST00000250489 C1orf134Q5TEV5 83 aa15.5■□□□□ 0.07
TMEM55B-201ENST00000250489 HECTD4Q9Y4D8 3996 aa15.49■□□□□ 0.07
TMEM55B-201ENST00000250489 C20orf197Q8N268 126 aa15.47■□□□□ 0.07
TMEM55B-201ENST00000250489 LY6G6CO95867 125 aa15.45■□□□□ 0.06
TMEM55B-201ENST00000250489 DSCR10P59022 87 aa15.45■□□□□ 0.06
TMEM55B-201ENST00000250489 IGLV5-52A0A0A0MRZ9 124 aa15.43■□□□□ 0.06
TMEM55B-201ENST00000250489 PLAC8Q9NZF1 115 aa15.43■□□□□ 0.06
TMEM55B-201ENST00000250489 A0A087WSZ3 146 aa15.42■□□□□ 0.06
TMEM55B-201ENST00000250489 TMEM258P61165 79 aa15.4■□□□□ 0.06
TMEM55B-201ENST00000250489 SRRM2Q9UQ35 2752 aaKnown RBP15.4■□□□□ 0.06
TMEM55B-201ENST00000250489 FBN3Q75N90 2809 aa15.4■□□□□ 0.06
TMEM55B-201ENST00000250489 DNAH6Q9C0G6 4158 aa15.37■□□□□ 0.05
TMEM55B-201ENST00000250489 K7EQZ3 153 aa15.37■□□□□ 0.05
TMEM55B-201ENST00000250489 PSORS1C2Q9UIG4 136 aa15.36■□□□□ 0.05
TMEM55B-201ENST00000250489 OCR1Q9BZK8 76 aa15.36■□□□□ 0.05
TMEM55B-201ENST00000250489 KLKP1Q107X0 134 aa15.35■□□□□ 0.05
TMEM55B-201ENST00000250489 DEFB116Q30KQ4 102 aa15.31■□□□□ 0.04
TMEM55B-201ENST00000250489 LINC00483Q53H64 154 aa15.31■□□□□ 0.04
TMEM55B-201ENST00000250489 WWC2-AS2Q96NR7 200 aa15.31■□□□□ 0.04
TMEM55B-201ENST00000250489 SNURFQ9Y675 71 aa15.29■□□□□ 0.04
TMEM55B-201ENST00000250489 TGP01266 2768 aa15.28■□□□□ 0.04
TMEM55B-201ENST00000250489 DNAH8Q96JB1 4490 aa15.28■□□□□ 0.04
TMEM55B-201ENST00000250489 ZNF706Q9Y5V0 76 aaPredicted RBP15.27■□□□□ 0.03
TMEM55B-201ENST00000250489 H7BZZ5 65 aa15.26■□□□□ 0.03
TMEM55B-201ENST00000250489 ZNF861PO60384 105 aa15.25■□□□□ 0.03
TMEM55B-201ENST00000250489 IGLV9-49A0A0B4J1Y8 123 aa15.24■□□□□ 0.03
TMEM55B-201ENST00000250489 ALMS1Q8TCU4 4167 aa15.24■□□□□ 0.03
TMEM55B-201ENST00000250489 TMEM254Q8TBM7 123 aa15.24■□□□□ 0.03
TMEM55B-201ENST00000250489 HCG22E2RYF7 251 aa15.22■□□□□ 0.03
TMEM55B-201ENST00000250489 LINC00472Q9H8W2 130 aa15.22■□□□□ 0.03
TMEM55B-201ENST00000250489 FAM30AQ9NZY2 134 aa15.21■□□□□ 0.03
TMEM55B-201ENST00000250489 RPL37AP61513 92 aaKnown RBP15.2■□□□□ 0.02
TMEM55B-201ENST00000250489 KRTAP10-2P60368 255 aa15.19■□□□□ 0.02
TMEM55B-201ENST00000250489 J3KT08 172 aa15.18■□□□□ 0.02
TMEM55B-201ENST00000250489 RPS28P62857 69 aaKnown RBP15.17■□□□□ 0.02
TMEM55B-201ENST00000250489 FRAS1Q86XX4 4008 aa15.15■□□□□ 0.02
TMEM55B-201ENST00000250489 DNAH11Q96DT5 4516 aa15.15■□□□□ 0.02
TMEM55B-201ENST00000250489 A0A0U1RQV1 116 aa15.15■□□□□ 0.02
TMEM55B-201ENST00000250489 NDUFC1O43677 76 aa15.15■□□□□ 0.02
TMEM55B-201ENST00000250489 FAM236DA0A1B0GTK5 79 aa15.15■□□□□ 0.02
TMEM55B-201ENST00000250489 FAM236CP0DP71 79 aa15.15■□□□□ 0.02
TMEM55B-201ENST00000250489 IGLV7-43P04211 117 aa15.13■□□□□ 0.01
TMEM55B-201ENST00000250489 DNAH5Q8TE73 4624 aa15.13■□□□□ 0.01
TMEM55B-201ENST00000250489 LCE6AA0A183 80 aa15.12■□□□□ 0.01
TMEM55B-201ENST00000250489 A8MWP4 228 aa15.12■□□□□ 0.01
TMEM55B-201ENST00000250489 ANAPC11Q9NYG5 84 aa15.12■□□□□ 0.01
TMEM55B-201ENST00000250489 PRR15Q8IV56 129 aa15.11■□□□□ 0.01
TMEM55B-201ENST00000250489 MOBPQ13875 183 aa15.11■□□□□ 0.01
TMEM55B-201ENST00000250489 WFDC13Q8IUB5 93 aa15.1■□□□□ 0.01
TMEM55B-201ENST00000250489 CIRBP-AS1Q8TBR5 109 aa15.1■□□□□ 0.01
TMEM55B-201ENST00000250489 KRTAP29-1A8MX34 341 aaPredicted RBP15.07■□□□□ 0
TMEM55B-201ENST00000250489 HRCT1Q6UXD1 115 aa15.06■□□□□ 0
TMEM55B-201ENST00000250489 Q96NJ1 140 aa15.05■□□□□ -0
TMEM55B-201ENST00000250489 HYDINQ4G0P3 5121 aa15.03■□□□□ -0
TMEM55B-201ENST00000250489 OXTP01178 125 aa15.02■□□□□ -0
TMEM55B-201ENST00000250489 Q6ZSA8 131 aa15.02■□□□□ -0
TMEM55B-201ENST00000250489 KRTAP10-1P60331 282 aa15.01□□□□□ -0.01
TMEM55B-201ENST00000250489 CASC2Q6XLA1 102 aa15.01□□□□□ -0.01
TMEM55B-201ENST00000250489 C5orf47Q569G3 176 aa14.99□□□□□ -0.01
TMEM55B-201ENST00000250489 PKD1P98161 4303 aa14.99□□□□□ -0.01
TMEM55B-201ENST00000250489 FAT2Q9NYQ8 4349 aa14.98□□□□□ -0.01
TMEM55B-201ENST00000250489 NDUFB1O75438 58 aa14.95□□□□□ -0.02
TMEM55B-201ENST00000250489 ZCCHC13Q8WW36 166 aaKnown RBP14.95□□□□□ -0.02
TMEM55B-201ENST00000250489 ATP5EP56381 51 aaPredicted RBP14.94□□□□□ -0.02
TMEM55B-201ENST00000250489 MMP24-AS1A0A0U1RRL7 71 aa14.94□□□□□ -0.02
TMEM55B-201ENST00000250489 SERP1Q9Y6X1 66 aa14.93□□□□□ -0.02
TMEM55B-201ENST00000250489 hDV103S1A0JD37 113 aa14.84□□□□□ -0.03
TMEM55B-201ENST00000250489 MP68P56378 58 aa14.84□□□□□ -0.03
TMEM55B-201ENST00000250489 SSBP3-AS1Q7Z2R9 100 aa14.83□□□□□ -0.04
TMEM55B-201ENST00000250489 ASB16-AS1Q495Z4 193 aa14.82□□□□□ -0.04
TMEM55B-201ENST00000250489 A0A1B0GVX0 72 aa14.82□□□□□ -0.04
TMEM55B-201ENST00000250489 CD164Q04900 197 aa14.82□□□□□ -0.04
TMEM55B-201ENST00000250489 LRP1BQ9NZR2 4599 aa14.82□□□□□ -0.04
TMEM55B-201ENST00000250489 C8orf17Q9NRJ1 99 aa14.81□□□□□ -0.04
TMEM55B-201ENST00000250489 CDK2AP2O75956 126 aa14.78□□□□□ -0.04
TMEM55B-201ENST00000250489 IGHV6-1A0A0B4J1U7 121 aa14.78□□□□□ -0.04
TMEM55B-201ENST00000250489 H0Y9P7 68 aa14.78□□□□□ -0.04
TMEM55B-201ENST00000250489 LINC00208Q96KT6 92 aa14.76□□□□□ -0.05
TMEM55B-201ENST00000250489 A0A087X002 238 aa14.74□□□□□ -0.05
TMEM55B-201ENST00000250489 H3BPC8 53 aa14.73□□□□□ -0.05
TMEM55B-201ENST00000250489 KRTAP13-2Q52LG2 175 aa14.73□□□□□ -0.05
TMEM55B-201ENST00000250489 FAM229BQ4G0N7 80 aa14.72□□□□□ -0.05
TMEM55B-201ENST00000250489 SACSQ9NZJ4 4579 aa14.72□□□□□ -0.05
TMEM55B-201ENST00000250489 TRAV22A0A0B4J277 110 aa14.71□□□□□ -0.05
TMEM55B-201ENST00000250489 SPINK6Q6UWN8 80 aa14.69□□□□□ -0.06
TMEM55B-201ENST00000250489 Q5XG85 94 aa14.68□□□□□ -0.06
TMEM55B-201ENST00000250489 NOTCH2NLQ7Z3S9 236 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms