RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 Q6ZRP5 223 aa7.36□□□□□ -1.23
RFPL3-201ENST00000249007 LINC00167Q96N53 147 aa7.36□□□□□ -1.23
RFPL3-201ENST00000249007 PSORS1C2Q9UIG4 136 aa7.36□□□□□ -1.23
RFPL3-201ENST00000249007 A0A087WVE0 104 aa7.36□□□□□ -1.23
RFPL3-201ENST00000249007 M0QY20 66 aa7.36□□□□□ -1.23
RFPL3-201ENST00000249007 RPL36AP83881 106 aaKnown RBP7.36□□□□□ -1.23
RFPL3-201ENST00000249007 FAM74A4Q5TZK3 123 aa7.36□□□□□ -1.23
RFPL3-201ENST00000249007 LINC00269Q8N2A0 174 aa7.36□□□□□ -1.23
RFPL3-201ENST00000249007 RPL36ALQ969Q0 106 aaKnown RBP7.36□□□□□ -1.23
RFPL3-201ENST00000249007 IGLV10-54A0A075B6I4 117 aa7.35□□□□□ -1.23
RFPL3-201ENST00000249007 PDE6GP18545 87 aa7.35□□□□□ -1.23
RFPL3-201ENST00000249007 CXCL6P80162 114 aa7.35□□□□□ -1.23
RFPL3-201ENST00000249007 TRBV10-1A0A0K0K1A3 114 aa7.34□□□□□ -1.23
RFPL3-201ENST00000249007 ORMDL1Q9P0S3 153 aa7.33□□□□□ -1.24
RFPL3-201ENST00000249007 F8WEM9 126 aa7.32□□□□□ -1.24
RFPL3-201ENST00000249007 Q1T7F1 81 aa7.32□□□□□ -1.24
RFPL3-201ENST00000249007 PRR26Q8N8Z3 221 aa7.32□□□□□ -1.24
RFPL3-201ENST00000249007 C14orf132Q9NPU4 83 aa7.32□□□□□ -1.24
RFPL3-201ENST00000249007 TRAV23DV6A0A075B6W5 121 aa7.31□□□□□ -1.24
RFPL3-201ENST00000249007 TMEM256-PLSCR3K7ERE1 68 aa7.31□□□□□ -1.24
RFPL3-201ENST00000249007 FAM218AQ96MZ4 157 aa7.31□□□□□ -1.24
RFPL3-201ENST00000249007 REG3AQ06141 175 aa7.3□□□□□ -1.24
RFPL3-201ENST00000249007 MRPL55Q7Z7F7 128 aaKnown RBP7.3□□□□□ -1.24
RFPL3-201ENST00000249007 OPRPNQ99935 248 aaPredicted RBP7.3□□□□□ -1.24
RFPL3-201ENST00000249007 A0A096LNI7 61 aa7.3□□□□□ -1.24
RFPL3-201ENST00000249007 F5H697 171 aa7.3□□□□□ -1.24
RFPL3-201ENST00000249007 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
RFPL3-201ENST00000249007 LOC110117498A0A087WWA1 95 aa7.29□□□□□ -1.24
RFPL3-201ENST00000249007 TRBV7-4A0A0J9YYF1 115 aa7.29□□□□□ -1.24
RFPL3-201ENST00000249007 LINC00474Q9P2X8 69 aa7.29□□□□□ -1.24
RFPL3-201ENST00000249007 C15orf56Q8N910 161 aa7.27□□□□□ -1.25
RFPL3-201ENST00000249007 FAM104AQ969W3 186 aa7.27□□□□□ -1.25
RFPL3-201ENST00000249007 NTM-AS1Q6ZSK4 140 aa7.26□□□□□ -1.25
RFPL3-201ENST00000249007 HIGD2BQ4VC39 106 aa7.25□□□□□ -1.25
RFPL3-201ENST00000249007 SOSTDC1Q6X4U4 206 aa7.25□□□□□ -1.25
RFPL3-201ENST00000249007 NDUFS5O43920 106 aa7.24□□□□□ -1.25
RFPL3-201ENST00000249007 MIR7-3HGQ8N6C7 128 aa7.24□□□□□ -1.25
RFPL3-201ENST00000249007 SMIM11BQ8TCY0 68 aa7.23□□□□□ -1.25
RFPL3-201ENST00000249007 IGLV1-50A0A075B6I6 118 aa7.22□□□□□ -1.25
RFPL3-201ENST00000249007 SS18Q15532 418 aa7.22□□□□□ -1.25
RFPL3-201ENST00000249007 TMEM254Q8TBM7 123 aa7.22□□□□□ -1.25
RFPL3-201ENST00000249007 DIRC1Q969H9 104 aa7.22□□□□□ -1.25
RFPL3-201ENST00000249007 CDKN2A-AS1Q9UH64 79 aa7.22□□□□□ -1.25
RFPL3-201ENST00000249007 IGKV2-29A2NJV5 120 aaPredicted RBP7.21□□□□□ -1.26
RFPL3-201ENST00000249007 KTN1-AS1Q86SY8 53 aa7.21□□□□□ -1.26
RFPL3-201ENST00000249007 IGLV4-60A0A075B6I1 120 aa7.2□□□□□ -1.26
RFPL3-201ENST00000249007 SMIM1B2RUZ4 78 aa7.2□□□□□ -1.26
RFPL3-201ENST00000249007 NCR3O14931 201 aa7.2□□□□□ -1.26
RFPL3-201ENST00000249007 LINC01547P58512 204 aaPredicted RBP7.2□□□□□ -1.26
RFPL3-201ENST00000249007 UBE2BP63146 152 aa7.2□□□□□ -1.26
RFPL3-201ENST00000249007 C1orf137Q5JT78 98 aa7.2□□□□□ -1.26
RFPL3-201ENST00000249007 SND1-IT1Q9HBX3 110 aa7.2□□□□□ -1.26
RFPL3-201ENST00000249007 MUC17Q685J3 4493 aa7.2□□□□□ -1.26
RFPL3-201ENST00000249007 GVQW2A0A096LPI5 108 aaPredicted RBP7.19□□□□□ -1.26
RFPL3-201ENST00000249007 PRYO14603 147 aa7.19□□□□□ -1.26
RFPL3-201ENST00000249007 A0A1B0GUV1 79 aa7.18□□□□□ -1.26
RFPL3-201ENST00000249007 NREPQ16612 68 aa7.18□□□□□ -1.26
RFPL3-201ENST00000249007 LINC00337Q8N6G1 96 aa7.18□□□□□ -1.26
RFPL3-201ENST00000249007 IGKV2-28A0A075B6P5 120 aa7.17□□□□□ -1.26
RFPL3-201ENST00000249007 hDV103S1A0JD37 113 aa7.17□□□□□ -1.26
RFPL3-201ENST00000249007 IGKV2D-28P01615 120 aa7.17□□□□□ -1.26
RFPL3-201ENST00000249007 C9orf129Q5T035 196 aaKnown RBP7.17□□□□□ -1.26
RFPL3-201ENST00000249007 Q6ZQT0 140 aa7.17□□□□□ -1.26
RFPL3-201ENST00000249007 SNURFQ9Y675 71 aa7.17□□□□□ -1.26
RFPL3-201ENST00000249007 A0A087WZ39 114 aa7.17□□□□□ -1.26
RFPL3-201ENST00000249007 H0Y9J4 135 aa7.17□□□□□ -1.26
RFPL3-201ENST00000249007 C4orf48Q5BLP8 95 aa7.17□□□□□ -1.26
RFPL3-201ENST00000249007 LINC00242Q5T6M2 205 aa7.16□□□□□ -1.26
RFPL3-201ENST00000249007 PHF5AQ7RTV0 110 aaKnown RBP7.16□□□□□ -1.26
RFPL3-201ENST00000249007 IGKV3OR2-268A0A0C4DH90 116 aa7.15□□□□□ -1.27
RFPL3-201ENST00000249007 IGLV7-43P04211 117 aa7.15□□□□□ -1.27
RFPL3-201ENST00000249007 KRTAP1-4P0C5Y4 121 aa7.15□□□□□ -1.27
RFPL3-201ENST00000249007 Q6ZVQ6 151 aa7.15□□□□□ -1.27
RFPL3-201ENST00000249007 MPLKIPQ8TAP9 179 aa7.15□□□□□ -1.27
RFPL3-201ENST00000249007 CYP4F30PQ9H0H9 118 aa7.15□□□□□ -1.27
RFPL3-201ENST00000249007 A0A1W2PNN7 141 aa7.14□□□□□ -1.27
RFPL3-201ENST00000249007 CHCHD10Q8WYQ3 142 aaPredicted RBP7.13□□□□□ -1.27
RFPL3-201ENST00000249007 UBE2L6O14933 153 aa7.12□□□□□ -1.27
RFPL3-201ENST00000249007 CD164L2Q6UWJ8 174 aa7.12□□□□□ -1.27
RFPL3-201ENST00000249007 A0A1B0GW54 56 aa7.11□□□□□ -1.27
RFPL3-201ENST00000249007 FAM229BQ4G0N7 80 aa7.11□□□□□ -1.27
RFPL3-201ENST00000249007 C9orf116Q5BN46 136 aaPredicted RBP7.11□□□□□ -1.27
RFPL3-201ENST00000249007 ATP11AUNQ6ZP68 121 aa7.11□□□□□ -1.27
RFPL3-201ENST00000249007 BPY2O14599 106 aa7.11□□□□□ -1.27
RFPL3-201ENST00000249007 UBE2AP49459 152 aa7.11□□□□□ -1.27
RFPL3-201ENST00000249007 OCR1Q9BZK8 76 aa7.11□□□□□ -1.27
RFPL3-201ENST00000249007 RBM12B-AS1Q9P1G2 102 aa7.11□□□□□ -1.27
RFPL3-201ENST00000249007 VPREB1P12018 145 aa7.1□□□□□ -1.27
RFPL3-201ENST00000249007 SYCNQ0VAF6 134 aa7.1□□□□□ -1.27
RFPL3-201ENST00000249007 XP32Q5T750 250 aa7.1□□□□□ -1.27
RFPL3-201ENST00000249007 COX7B2Q8TF08 81 aa7.1□□□□□ -1.27
RFPL3-201ENST00000249007 M0R378 163 aa7.07□□□□□ -1.28
RFPL3-201ENST00000249007 NDUFB1O75438 58 aa7.07□□□□□ -1.28
RFPL3-201ENST00000249007 ELOF1P60002 83 aaKnown RBP7.07□□□□□ -1.28
RFPL3-201ENST00000249007 LIMD2Q9BT23 127 aa7.07□□□□□ -1.28
RFPL3-201ENST00000249007 LINC00158P58513 81 aa7.05□□□□□ -1.28
RFPL3-201ENST00000249007 TPRXLQ17RH7 258 aa7.05□□□□□ -1.28
RFPL3-201ENST00000249007 CDC42SE2Q9NRR3 84 aa7.05□□□□□ -1.28
RFPL3-201ENST00000249007 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.04□□□□□ -1.28
RFPL3-201ENST00000249007 TRAV22A0A0B4J277 110 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms