RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 FAM19A5Q7Z5A7 132 aaPredicted RBP10.67□□□□□ -0.7
CDKN1A-201ENST00000244741 DYNC1H1Q14204 4646 aaKnown RBP10.66□□□□□ -0.7
CDKN1A-201ENST00000244741 SCXQ7RTU7 201 aa10.66□□□□□ -0.7
CDKN1A-201ENST00000244741 DHRS4-AS1Q9P1J3 65 aa10.66□□□□□ -0.7
CDKN1A-201ENST00000244741 FAM30AQ9NZY2 134 aa10.65□□□□□ -0.7
CDKN1A-201ENST00000244741 ETDCA0A1B0GVM5 59 aa10.65□□□□□ -0.71
CDKN1A-201ENST00000244741 MRPL55Q7Z7F7 128 aaKnown RBP10.65□□□□□ -0.71
CDKN1A-201ENST00000244741 SMIM20Q8N5G0 67 aa10.65□□□□□ -0.71
CDKN1A-201ENST00000244741 DNAH8Q96JB1 4490 aa10.64□□□□□ -0.71
CDKN1A-201ENST00000244741 A0A1W2PNN7 141 aa10.63□□□□□ -0.71
CDKN1A-201ENST00000244741 ST20-AS1Q8NBB2 130 aa10.62□□□□□ -0.71
CDKN1A-201ENST00000244741 IGLV5-48A0A075B6I7 105 aa10.62□□□□□ -0.71
CDKN1A-201ENST00000244741 EPPK1P58107 5090 aaKnown RBP10.61□□□□□ -0.71
CDKN1A-201ENST00000244741 SPACA4Q8TDM5 124 aa10.61□□□□□ -0.71
CDKN1A-201ENST00000244741 ERC2-IT1O76042 136 aa10.6□□□□□ -0.71
CDKN1A-201ENST00000244741 BCE1O60756 84 aa10.58□□□□□ -0.72
CDKN1A-201ENST00000244741 LINC00474Q9P2X8 69 aa10.58□□□□□ -0.72
CDKN1A-201ENST00000244741 PKIGQ9Y2B9 76 aa10.57□□□□□ -0.72
CDKN1A-201ENST00000244741 NREPQ16612 68 aa10.56□□□□□ -0.72
CDKN1A-201ENST00000244741 REG3GQ6UW15 175 aa10.56□□□□□ -0.72
CDKN1A-201ENST00000244741 UBE2BP63146 152 aa10.56□□□□□ -0.72
CDKN1A-201ENST00000244741 TRAV7A0A075B6U4 112 aa10.55□□□□□ -0.72
CDKN1A-201ENST00000244741 PHF5AQ7RTV0 110 aaKnown RBP10.55□□□□□ -0.72
CDKN1A-201ENST00000244741 A0A1W2PNM2 257 aa10.54□□□□□ -0.72
CDKN1A-201ENST00000244741 Q8N9L7 120 aa10.54□□□□□ -0.72
CDKN1A-201ENST00000244741 CIRBP-AS1Q8TBR5 109 aa10.54□□□□□ -0.72
CDKN1A-201ENST00000244741 Q6ZSA8 131 aa10.53□□□□□ -0.72
CDKN1A-201ENST00000244741 C20orf197Q8N268 126 aa10.53□□□□□ -0.72
CDKN1A-201ENST00000244741 C1orf137Q5JT78 98 aa10.52□□□□□ -0.72
CDKN1A-201ENST00000244741 APOBP04114 4563 aaKnown RBP10.52□□□□□ -0.73
CDKN1A-201ENST00000244741 TMEM258P61165 79 aa10.52□□□□□ -0.73
CDKN1A-201ENST00000244741 IGKV4-1P06312 121 aa10.5□□□□□ -0.73
CDKN1A-201ENST00000244741 KRTAP11-1Q8IUC1 163 aa10.5□□□□□ -0.73
CDKN1A-201ENST00000244741 PLAC8Q9NZF1 115 aa10.5□□□□□ -0.73
CDKN1A-201ENST00000244741 BPY2O14599 106 aa10.49□□□□□ -0.73
CDKN1A-201ENST00000244741 SMIM29Q86T20 159 aa10.48□□□□□ -0.73
CDKN1A-201ENST00000244741 Q8NBF4 154 aa10.48□□□□□ -0.73
CDKN1A-201ENST00000244741 PRLHP81277 87 aa10.47□□□□□ -0.73
CDKN1A-201ENST00000244741 A0A1B0GW54 56 aa10.46□□□□□ -0.73
CDKN1A-201ENST00000244741 SPRR4Q96PI1 79 aa10.45□□□□□ -0.74
CDKN1A-201ENST00000244741 J3KT08 172 aa10.44□□□□□ -0.74
CDKN1A-201ENST00000244741 EPM2AB3EWF7 344 aa10.43□□□□□ -0.74
CDKN1A-201ENST00000244741 SMR3BP02814 79 aaPredicted RBP10.43□□□□□ -0.74
CDKN1A-201ENST00000244741 VPS13BQ7Z7G8 4022 aa10.43□□□□□ -0.74
CDKN1A-201ENST00000244741 RPS28P62857 69 aaKnown RBP10.42□□□□□ -0.74
CDKN1A-201ENST00000244741 A0A0G2JQZ4 141 aa10.42□□□□□ -0.74
CDKN1A-201ENST00000244741 SNURFQ9Y675 71 aa10.42□□□□□ -0.74
CDKN1A-201ENST00000244741 FAT1Q14517 4588 aa10.41□□□□□ -0.74
CDKN1A-201ENST00000244741 HIGD2AQ9BW72 106 aa10.41□□□□□ -0.74
CDKN1A-201ENST00000244741 SRRM2Q9UQ35 2752 aaKnown RBP10.41□□□□□ -0.74
CDKN1A-201ENST00000244741 KLKP1Q107X0 134 aa10.41□□□□□ -0.74
CDKN1A-201ENST00000244741 F8WEM9 126 aa10.39□□□□□ -0.75
CDKN1A-201ENST00000244741 H7BZZ5 65 aa10.39□□□□□ -0.75
CDKN1A-201ENST00000244741 HSPG2P98160 4391 aa10.39□□□□□ -0.75
CDKN1A-201ENST00000244741 IGFL1Q6UW32 110 aa10.38□□□□□ -0.75
CDKN1A-201ENST00000244741 KIAA1109Q2LD37 5005 aa10.38□□□□□ -0.75
CDKN1A-201ENST00000244741 PSORS1C2Q9UIG4 136 aa10.37□□□□□ -0.75
CDKN1A-201ENST00000244741 OXTP01178 125 aa10.36□□□□□ -0.75
CDKN1A-201ENST00000244741 OCR1Q9BZK8 76 aa10.36□□□□□ -0.75
CDKN1A-201ENST00000244741 DSCR10P59022 87 aa10.35□□□□□ -0.75
CDKN1A-201ENST00000244741 IGLV8-61A0A075B6I0 122 aa10.34□□□□□ -0.75
CDKN1A-201ENST00000244741 RYR1P21817 5038 aa10.33□□□□□ -0.76
CDKN1A-201ENST00000244741 FAM236DA0A1B0GTK5 79 aa10.33□□□□□ -0.76
CDKN1A-201ENST00000244741 FAM236CP0DP71 79 aa10.33□□□□□ -0.76
CDKN1A-201ENST00000244741 UBE2AP49459 152 aa10.32□□□□□ -0.76
CDKN1A-201ENST00000244741 H0Y9J4 135 aa10.31□□□□□ -0.76
CDKN1A-201ENST00000244741 TMEM254Q8TBM7 123 aa10.31□□□□□ -0.76
CDKN1A-201ENST00000244741 K7EQZ3 153 aa10.31□□□□□ -0.76
CDKN1A-201ENST00000244741 CDK2AP2O75956 126 aa10.28□□□□□ -0.76
CDKN1A-201ENST00000244741 SPRR1BP22528 89 aa10.28□□□□□ -0.76
CDKN1A-201ENST00000244741 DEFB116Q30KQ4 102 aa10.28□□□□□ -0.76
CDKN1A-201ENST00000244741 A0A087WSZ3 146 aa10.27□□□□□ -0.77
CDKN1A-201ENST00000244741 NDUFC1O43677 76 aa10.26□□□□□ -0.77
CDKN1A-201ENST00000244741 KRTAP17-1Q9BYP8 105 aa10.26□□□□□ -0.77
CDKN1A-201ENST00000244741 A0A0U1RQV1 116 aa10.25□□□□□ -0.77
CDKN1A-201ENST00000244741 RPL37AP61513 92 aaKnown RBP10.25□□□□□ -0.77
CDKN1A-201ENST00000244741 KRTAP13-1Q8IUC0 172 aa10.23□□□□□ -0.77
CDKN1A-201ENST00000244741 IGLV7-43P04211 117 aa10.22□□□□□ -0.77
CDKN1A-201ENST00000244741 BIRC6Q9NR09 4857 aa10.22□□□□□ -0.77
CDKN1A-201ENST00000244741 SERP1Q9Y6X1 66 aa10.21□□□□□ -0.78
CDKN1A-201ENST00000244741 HCG22E2RYF7 251 aa10.19□□□□□ -0.78
CDKN1A-201ENST00000244741 ZNF861PO60384 105 aa10.18□□□□□ -0.78
CDKN1A-201ENST00000244741 Q5VSD8 79 aa10.18□□□□□ -0.78
CDKN1A-201ENST00000244741 FAM229AH3BQW9 127 aa10.17□□□□□ -0.78
CDKN1A-201ENST00000244741 KRTAP10-4P60372 401 aaPredicted RBP10.17□□□□□ -0.78
CDKN1A-201ENST00000244741 Q5XG85 94 aa10.14□□□□□ -0.79
CDKN1A-201ENST00000244741 WFDC13Q8IUB5 93 aa10.14□□□□□ -0.79
CDKN1A-201ENST00000244741 LINC00472Q9H8W2 130 aa10.13□□□□□ -0.79
CDKN1A-201ENST00000244741 ATP5EP56381 51 aaPredicted RBP10.12□□□□□ -0.79
CDKN1A-201ENST00000244741 ANAPC11Q9NYG5 84 aa10.12□□□□□ -0.79
CDKN1A-201ENST00000244741 PLA2G1BP04054 148 aaKnown RBP10.11□□□□□ -0.79
CDKN1A-201ENST00000244741 Q8N1X5 172 aa10.11□□□□□ -0.79
CDKN1A-201ENST00000244741 C4orf26Q17RF5 130 aa10.1□□□□□ -0.79
CDKN1A-201ENST00000244741 ZCCHC13Q8WW36 166 aaKnown RBP10.09□□□□□ -0.79
CDKN1A-201ENST00000244741 IGLV9-49A0A0B4J1Y8 123 aa10.08□□□□□ -0.8
CDKN1A-201ENST00000244741 KRTAP29-1A8MX34 341 aaPredicted RBP10.08□□□□□ -0.8
CDKN1A-201ENST00000244741 C5orf47Q569G3 176 aa10.08□□□□□ -0.8
CDKN1A-201ENST00000244741 PRR15Q8IV56 129 aa10.08□□□□□ -0.8
CDKN1A-201ENST00000244741 A8MWP4 228 aa10.07□□□□□ -0.8
CDKN1A-201ENST00000244741 KRTAP4-5Q9BYR2 181 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms