RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.11
HIF3A-201ENST00000244302 APOBP04114 4563 aaKnown RBP8.09□□□□□ -1.11
HIF3A-201ENST00000244302 EPPK1P58107 5090 aaKnown RBP8.07□□□□□ -1.12
HIF3A-201ENST00000244302 FAT1Q14517 4588 aa8.07□□□□□ -1.12
HIF3A-201ENST00000244302 TRBV7-4A0A0J9YYF1 115 aa8.07□□□□□ -1.12
HIF3A-201ENST00000244302 LINC01547P58512 204 aaPredicted RBP8.07□□□□□ -1.12
HIF3A-201ENST00000244302 Q6ZVQ6 151 aa8.07□□□□□ -1.12
HIF3A-201ENST00000244302 A0A1B0GVY2 172 aa8.06□□□□□ -1.12
HIF3A-201ENST00000244302 CYSTM1Q9H1C7 97 aa8.06□□□□□ -1.12
HIF3A-201ENST00000244302 KCNQ1DNQ9H478 68 aa8.06□□□□□ -1.12
HIF3A-201ENST00000244302 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
HIF3A-201ENST00000244302 TRAV7A0A075B6U4 112 aa8.05□□□□□ -1.12
HIF3A-201ENST00000244302 CIRBP-AS1Q8TBR5 109 aa8.04□□□□□ -1.12
HIF3A-201ENST00000244302 LINC00474Q9P2X8 69 aa8.04□□□□□ -1.12
HIF3A-201ENST00000244302 UBE2BP63146 152 aa8.03□□□□□ -1.12
HIF3A-201ENST00000244302 KRTAP4-16G5E9R7 235 aaPredicted RBP8.03□□□□□ -1.12
HIF3A-201ENST00000244302 LINC00336Q6ZUF6 198 aa8.02□□□□□ -1.13
HIF3A-201ENST00000244302 EPM2AB3EWF7 344 aa8.02□□□□□ -1.13
HIF3A-201ENST00000244302 SCXQ7RTU7 201 aa8.02□□□□□ -1.13
HIF3A-201ENST00000244302 LINC00528Q8N1L1 170 aa8.02□□□□□ -1.13
HIF3A-201ENST00000244302 PLAC8Q9NZF1 115 aa8.02□□□□□ -1.13
HIF3A-201ENST00000244302 SPRR1AP35321 89 aa8□□□□□ -1.13
HIF3A-201ENST00000244302 PRLHP81277 87 aa8□□□□□ -1.13
HIF3A-201ENST00000244302 REG3GQ6UW15 175 aa8□□□□□ -1.13
HIF3A-201ENST00000244302 Q9BRP9 147 aa8□□□□□ -1.13
HIF3A-201ENST00000244302 Q6ZSA8 131 aa8□□□□□ -1.13
HIF3A-201ENST00000244302 ERC2-IT1O76042 136 aa7.99□□□□□ -1.13
HIF3A-201ENST00000244302 C20orf197Q8N268 126 aa7.99□□□□□ -1.13
HIF3A-201ENST00000244302 PRYO14603 147 aa7.98□□□□□ -1.13
HIF3A-201ENST00000244302 KLKP1Q107X0 134 aa7.97□□□□□ -1.13
HIF3A-201ENST00000244302 PKIGQ9Y2B9 76 aa7.97□□□□□ -1.13
HIF3A-201ENST00000244302 ETDCA0A1B0GVM5 59 aa7.97□□□□□ -1.13
HIF3A-201ENST00000244302 PSORS1C2Q9UIG4 136 aa7.97□□□□□ -1.13
HIF3A-201ENST00000244302 ST20-AS1Q8NBB2 130 aa7.96□□□□□ -1.13
HIF3A-201ENST00000244302 Q6ZRX8 168 aa7.96□□□□□ -1.14
HIF3A-201ENST00000244302 FAM236DA0A1B0GTK5 79 aa7.95□□□□□ -1.14
HIF3A-201ENST00000244302 FAM236CP0DP71 79 aa7.95□□□□□ -1.14
HIF3A-201ENST00000244302 A0A1B0GW54 56 aa7.94□□□□□ -1.14
HIF3A-201ENST00000244302 NDUFC1O43677 76 aa7.94□□□□□ -1.14
HIF3A-201ENST00000244302 KIAA1109Q2LD37 5005 aa7.93□□□□□ -1.14
HIF3A-201ENST00000244302 HSPG2P98160 4391 aa7.93□□□□□ -1.14
HIF3A-201ENST00000244302 H7BZZ5 65 aa7.93□□□□□ -1.14
HIF3A-201ENST00000244302 DEFB105AQ8NG35 78 aa7.93□□□□□ -1.14
HIF3A-201ENST00000244302 HIGD2AQ9BW72 106 aa7.93□□□□□ -1.14
HIF3A-201ENST00000244302 SMR3BP02814 79 aaPredicted RBP7.92□□□□□ -1.14
HIF3A-201ENST00000244302 C5orf47Q569G3 176 aa7.92□□□□□ -1.14
HIF3A-201ENST00000244302 C1orf137Q5JT78 98 aa7.92□□□□□ -1.14
HIF3A-201ENST00000244302 DHRS4-AS1Q9P1J3 65 aa7.91□□□□□ -1.14
HIF3A-201ENST00000244302 SERP1Q9Y6X1 66 aa7.91□□□□□ -1.14
HIF3A-201ENST00000244302 RYR1P21817 5038 aa7.9□□□□□ -1.14
HIF3A-201ENST00000244302 OXTP01178 125 aa7.9□□□□□ -1.14
HIF3A-201ENST00000244302 IGLV5-48A0A075B6I7 105 aa7.9□□□□□ -1.15
HIF3A-201ENST00000244302 ATP5EP56381 51 aaPredicted RBP7.9□□□□□ -1.15
HIF3A-201ENST00000244302 NREPQ16612 68 aa7.9□□□□□ -1.15
HIF3A-201ENST00000244302 UBE2AP49459 152 aa7.89□□□□□ -1.15
HIF3A-201ENST00000244302 KRTAP13-1Q8IUC0 172 aa7.89□□□□□ -1.15
HIF3A-201ENST00000244302 Q8N377 158 aa7.88□□□□□ -1.15
HIF3A-201ENST00000244302 BPY2O14599 106 aa7.87□□□□□ -1.15
HIF3A-201ENST00000244302 IGKV4-1P06312 121 aa7.87□□□□□ -1.15
HIF3A-201ENST00000244302 ANAPC11Q9NYG5 84 aa7.85□□□□□ -1.15
HIF3A-201ENST00000244302 Q5XG85 94 aa7.84□□□□□ -1.15
HIF3A-201ENST00000244302 KRTAP17-1Q9BYP8 105 aa7.84□□□□□ -1.15
HIF3A-201ENST00000244302 SNURFQ9Y675 71 aa7.84□□□□□ -1.15
HIF3A-201ENST00000244302 F8WEM9 126 aa7.84□□□□□ -1.16
HIF3A-201ENST00000244302 A0A0G2JQZ4 141 aa7.82□□□□□ -1.16
HIF3A-201ENST00000244302 IGLV7-43P04211 117 aa7.82□□□□□ -1.16
HIF3A-201ENST00000244302 TMEM254Q8TBM7 123 aa7.82□□□□□ -1.16
HIF3A-201ENST00000244302 OCR1Q9BZK8 76 aa7.82□□□□□ -1.16
HIF3A-201ENST00000244302 H0Y9J4 135 aa7.81□□□□□ -1.16
HIF3A-201ENST00000244302 ZNF861PO60384 105 aa7.81□□□□□ -1.16
HIF3A-201ENST00000244302 SMIM29Q86T20 159 aa7.81□□□□□ -1.16
HIF3A-201ENST00000244302 Q8NBF4 154 aa7.8□□□□□ -1.16
HIF3A-201ENST00000244302 Q8N9L7 120 aa7.79□□□□□ -1.16
HIF3A-201ENST00000244302 SPRR4Q96PI1 79 aa7.79□□□□□ -1.16
HIF3A-201ENST00000244302 A0A1W2PNM2 257 aa7.78□□□□□ -1.16
HIF3A-201ENST00000244302 SMIM26A0A096LP01 95 aa7.78□□□□□ -1.16
HIF3A-201ENST00000244302 C4orf26Q17RF5 130 aa7.78□□□□□ -1.16
HIF3A-201ENST00000244302 A0A0U1RQV1 116 aa7.77□□□□□ -1.17
HIF3A-201ENST00000244302 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
HIF3A-201ENST00000244302 KRTAP10-4P60372 401 aaPredicted RBP7.75□□□□□ -1.17
HIF3A-201ENST00000244302 RPL37AP61513 92 aaKnown RBP7.74□□□□□ -1.17
HIF3A-201ENST00000244302 HRCT1Q6UXD1 115 aa7.74□□□□□ -1.17
HIF3A-201ENST00000244302 IGLV9-49A0A0B4J1Y8 123 aa7.71□□□□□ -1.18
HIF3A-201ENST00000244302 SPRR1BP22528 89 aa7.7□□□□□ -1.18
HIF3A-201ENST00000244302 DSCR10P59022 87 aa7.69□□□□□ -1.18
HIF3A-201ENST00000244302 PKHD1L1Q86WI1 4243 aa7.68□□□□□ -1.18
HIF3A-201ENST00000244302 IGLV8-61A0A075B6I0 122 aa7.68□□□□□ -1.18
HIF3A-201ENST00000244302 A0A087X002 238 aa7.68□□□□□ -1.18
HIF3A-201ENST00000244302 FP248Q71RG6 208 aaPredicted RBP7.68□□□□□ -1.18
HIF3A-201ENST00000244302 MYCBP2O75592 4640 aa7.68□□□□□ -1.18
HIF3A-201ENST00000244302 LINC00483Q53H64 154 aa7.67□□□□□ -1.18
HIF3A-201ENST00000244302 BIRC6Q9NR09 4857 aa7.67□□□□□ -1.18
HIF3A-201ENST00000244302 KRTAP1-4P0C5Y4 121 aa7.67□□□□□ -1.18
HIF3A-201ENST00000244302 IGFL1Q6UW32 110 aa7.66□□□□□ -1.18
HIF3A-201ENST00000244302 CDK2AP2O75956 126 aa7.66□□□□□ -1.18
HIF3A-201ENST00000244302 FLG2Q5D862 2391 aaPredicted RBP7.65□□□□□ -1.18
HIF3A-201ENST00000244302 HCG22E2RYF7 251 aa7.64□□□□□ -1.19
HIF3A-201ENST00000244302 K7EQZ3 153 aa7.64□□□□□ -1.19
HIF3A-201ENST00000244302 MOBPQ13875 183 aa7.64□□□□□ -1.19
HIF3A-201ENST00000244302 KRTAP13-2Q52LG2 175 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms