RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 IGLV8-61A0A075B6I0 122 aa14.51□□□□□ -0.09
RRP9-201ENST00000232888 LINC00643Q86TS7 51 aa14.51□□□□□ -0.09
RRP9-201ENST00000232888 LINC00846Q9NV44 126 aa14.51□□□□□ -0.09
RRP9-201ENST00000232888 DNAH8Q96JB1 4490 aa14.51□□□□□ -0.09
RRP9-201ENST00000232888 A0A1B0GW54 56 aa14.5□□□□□ -0.09
RRP9-201ENST00000232888 SPRR4Q96PI1 79 aa14.49□□□□□ -0.09
RRP9-201ENST00000232888 LINC00483Q53H64 154 aa14.47□□□□□ -0.09
RRP9-201ENST00000232888 MT-ATP8P03928 68 aa14.46□□□□□ -0.09
RRP9-201ENST00000232888 RYR2Q92736 4967 aa14.45□□□□□ -0.1
RRP9-201ENST00000232888 UBL5Q9BZL1 73 aa14.44□□□□□ -0.1
RRP9-201ENST00000232888 Q6JHZ5 121 aa14.43□□□□□ -0.1
RRP9-201ENST00000232888 Q8NBF4 154 aa14.4□□□□□ -0.1
RRP9-201ENST00000232888 HAMPP81172 84 aa14.39□□□□□ -0.11
RRP9-201ENST00000232888 A0A1W2PNM2 257 aa14.39□□□□□ -0.11
RRP9-201ENST00000232888 IGFL1Q6UW32 110 aa14.38□□□□□ -0.11
RRP9-201ENST00000232888 ATP5EP2Q5VTU8 51 aa14.37□□□□□ -0.11
RRP9-201ENST00000232888 RPL37AP61513 92 aaKnown RBP14.36□□□□□ -0.11
RRP9-201ENST00000232888 TRBV7-7A0A0K0K1E9 115 aa14.35□□□□□ -0.11
RRP9-201ENST00000232888 IMUPQ9GZP8 106 aa14.35□□□□□ -0.11
RRP9-201ENST00000232888 Q6Q795 121 aa14.34□□□□□ -0.11
RRP9-201ENST00000232888 SCGB1A1P11684 91 aa14.34□□□□□ -0.11
RRP9-201ENST00000232888 CRYGAP11844 174 aa14.33□□□□□ -0.12
RRP9-201ENST00000232888 Q6ZVQ6 151 aa14.33□□□□□ -0.12
RRP9-201ENST00000232888 KMT2CQ8NEZ4 4911 aaKnown RBP14.31□□□□□ -0.12
RRP9-201ENST00000232888 NREPQ16612 68 aa14.27□□□□□ -0.12
RRP9-201ENST00000232888 SRRM2Q9UQ35 2752 aaKnown RBP14.26□□□□□ -0.13
RRP9-201ENST00000232888 IGLV9-49A0A0B4J1Y8 123 aa14.25□□□□□ -0.13
RRP9-201ENST00000232888 C9orf153Q5TBE3 101 aa14.25□□□□□ -0.13
RRP9-201ENST00000232888 CXCL6P80162 114 aa14.24□□□□□ -0.13
RRP9-201ENST00000232888 IGKV3D-7A0A0C4DH55 119 aa14.23□□□□□ -0.13
RRP9-201ENST00000232888 LRP1BQ9NZR2 4599 aa14.21□□□□□ -0.13
RRP9-201ENST00000232888 A0A0G2JQZ4 141 aa14.21□□□□□ -0.14
RRP9-201ENST00000232888 FAM229BQ4G0N7 80 aa14.2□□□□□ -0.14
RRP9-201ENST00000232888 PKHD1P08F94 4074 aa14.19□□□□□ -0.14
RRP9-201ENST00000232888 ANAPC11Q9NYG5 84 aa14.19□□□□□ -0.14
RRP9-201ENST00000232888 DYNC1H1Q14204 4646 aaKnown RBP14.19□□□□□ -0.14
RRP9-201ENST00000232888 MOBPQ13875 183 aa14.17□□□□□ -0.14
RRP9-201ENST00000232888 SPINK6Q6UWN8 80 aa14.17□□□□□ -0.14
RRP9-201ENST00000232888 SSBP3-AS1Q7Z2R9 100 aa14.15□□□□□ -0.14
RRP9-201ENST00000232888 A0A087WSZ3 146 aa14.14□□□□□ -0.15
RRP9-201ENST00000232888 BPY2O14599 106 aa14.13□□□□□ -0.15
RRP9-201ENST00000232888 SMR3BP02814 79 aaPredicted RBP14.11□□□□□ -0.15
RRP9-201ENST00000232888 HIST1H4AP62805 103 aaKnown RBP14.09□□□□□ -0.15
RRP9-201ENST00000232888 KRTAP1-4P0C5Y4 121 aa14.08□□□□□ -0.16
RRP9-201ENST00000232888 CD164Q04900 197 aa14.07□□□□□ -0.16
RRP9-201ENST00000232888 CDK2AP2O75956 126 aa14.05□□□□□ -0.16
RRP9-201ENST00000232888 SS18L2Q9UHA2 77 aa14.05□□□□□ -0.16
RRP9-201ENST00000232888 PCP4P48539 62 aa14.04□□□□□ -0.16
RRP9-201ENST00000232888 KRTAP10-4P60372 401 aaPredicted RBP14.03□□□□□ -0.16
RRP9-201ENST00000232888 A0A087X002 238 aa14.02□□□□□ -0.16
RRP9-201ENST00000232888 FAM236AA0A1B0GUQ0 79 aa14.02□□□□□ -0.16
RRP9-201ENST00000232888 FAM236BA0A1B0GV22 79 aa14.02□□□□□ -0.16
RRP9-201ENST00000232888 PLA2G1BP04054 148 aaKnown RBP14□□□□□ -0.17
RRP9-201ENST00000232888 KRTAP13-2Q52LG2 175 aa14□□□□□ -0.17
RRP9-201ENST00000232888 APOBP04114 4563 aaKnown RBP14□□□□□ -0.17
RRP9-201ENST00000232888 VPS13BQ7Z7G8 4022 aa14□□□□□ -0.17
RRP9-201ENST00000232888 RYR3Q15413 4870 aa13.99□□□□□ -0.17
RRP9-201ENST00000232888 A0A087WVE0 104 aa13.99□□□□□ -0.17
RRP9-201ENST00000232888 LINC00472Q9H8W2 130 aa13.98□□□□□ -0.17
RRP9-201ENST00000232888 FAM229AH3BQW9 127 aa13.97□□□□□ -0.17
RRP9-201ENST00000232888 HRCT1Q6UXD1 115 aa13.97□□□□□ -0.17
RRP9-201ENST00000232888 J3KT08 172 aa13.96□□□□□ -0.18
RRP9-201ENST00000232888 IGKV4-1P06312 121 aa13.95□□□□□ -0.18
RRP9-201ENST00000232888 DSCR10P59022 87 aa13.95□□□□□ -0.18
RRP9-201ENST00000232888 ATOX1O00244 68 aa13.91□□□□□ -0.18
RRP9-201ENST00000232888 ANAPC13Q9BS18 74 aa13.91□□□□□ -0.18
RRP9-201ENST00000232888 Q8N9L7 120 aa13.89□□□□□ -0.19
RRP9-201ENST00000232888 TYMSOSQ8TAI1 123 aa13.89□□□□□ -0.19
RRP9-201ENST00000232888 ASB16-AS1Q495Z4 193 aa13.88□□□□□ -0.19
RRP9-201ENST00000232888 DEFB116Q30KQ4 102 aa13.87□□□□□ -0.19
RRP9-201ENST00000232888 Q5XG85 94 aa13.87□□□□□ -0.19
RRP9-201ENST00000232888 Q96NJ1 140 aa13.86□□□□□ -0.19
RRP9-201ENST00000232888 A8MWP4 228 aa13.85□□□□□ -0.19
RRP9-201ENST00000232888 K7EQZ3 153 aa13.84□□□□□ -0.19
RRP9-201ENST00000232888 C4orf48Q5BLP8 95 aa13.82□□□□□ -0.2
RRP9-201ENST00000232888 NDUFB1O75438 58 aa13.8□□□□□ -0.2
RRP9-201ENST00000232888 Q5VSD8 79 aa13.8□□□□□ -0.2
RRP9-201ENST00000232888 PRR15Q8IV56 129 aa13.8□□□□□ -0.2
RRP9-201ENST00000232888 PRR26Q8N8Z3 221 aa13.8□□□□□ -0.2
RRP9-201ENST00000232888 LIMD2Q9BT23 127 aa13.79□□□□□ -0.2
RRP9-201ENST00000232888 SPAG11AQ6PDA7 123 aa13.79□□□□□ -0.2
RRP9-201ENST00000232888 SPINK1P00995 79 aa13.78□□□□□ -0.2
RRP9-201ENST00000232888 SMIM20Q8N5G0 67 aa13.78□□□□□ -0.2
RRP9-201ENST00000232888 FAT1Q14517 4588 aa13.76□□□□□ -0.21
RRP9-201ENST00000232888 RPS29P62273 56 aaKnown RBP13.75□□□□□ -0.21
RRP9-201ENST00000232888 HCG22E2RYF7 251 aa13.74□□□□□ -0.21
RRP9-201ENST00000232888 LINC00304Q8N9R0 145 aa13.73□□□□□ -0.21
RRP9-201ENST00000232888 SERP2Q8N6R1 65 aa13.71□□□□□ -0.21
RRP9-201ENST00000232888 A0A1B0GVX0 72 aa13.67□□□□□ -0.22
RRP9-201ENST00000232888 Q8N1X5 172 aa13.67□□□□□ -0.22
RRP9-201ENST00000232888 TRAV7A0A075B6U4 112 aa13.66□□□□□ -0.22
RRP9-201ENST00000232888 COX7CP15954 63 aa13.66□□□□□ -0.22
RRP9-201ENST00000232888 RYR1P21817 5038 aa13.66□□□□□ -0.22
RRP9-201ENST00000232888 HSPG2P98160 4391 aa13.66□□□□□ -0.22
RRP9-201ENST00000232888 UQCRQO14949 82 aa13.65□□□□□ -0.22
RRP9-201ENST00000232888 C1orf195Q5TG92 126 aa13.65□□□□□ -0.22
RRP9-201ENST00000232888 KRTAP29-1A8MX34 341 aaPredicted RBP13.62□□□□□ -0.23
RRP9-201ENST00000232888 PKHD1L1Q86WI1 4243 aa13.62□□□□□ -0.23
RRP9-201ENST00000232888 CASC2Q6XLA1 102 aa13.62□□□□□ -0.23
RRP9-201ENST00000232888 MMP24-AS1A0A0U1RRL7 71 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms