RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 PHF5AQ7RTV0 110 aaKnown RBP10.55□□□□□ -0.72
GAPDH-201ENST00000229239 SMIM29Q86T20 159 aa10.55□□□□□ -0.72
GAPDH-201ENST00000229239 A0A1W2PNM2 257 aa10.55□□□□□ -0.72
GAPDH-201ENST00000229239 BPY2O14599 106 aa10.55□□□□□ -0.72
GAPDH-201ENST00000229239 SS18L2Q9UHA2 77 aa10.55□□□□□ -0.72
GAPDH-201ENST00000229239 TRAV7A0A075B6U4 112 aa10.54□□□□□ -0.72
GAPDH-201ENST00000229239 PRLHP81277 87 aa10.54□□□□□ -0.72
GAPDH-201ENST00000229239 EPM2AB3EWF7 344 aa10.53□□□□□ -0.72
GAPDH-201ENST00000229239 SPRR1BP22528 89 aa10.53□□□□□ -0.72
GAPDH-201ENST00000229239 A0A087WTM6 91 aa10.52□□□□□ -0.73
GAPDH-201ENST00000229239 Q6ZR54 194 aa10.51□□□□□ -0.73
GAPDH-201ENST00000229239 HIGD2AQ9BW72 106 aa10.51□□□□□ -0.73
GAPDH-201ENST00000229239 SPACA4Q8TDM5 124 aa10.5□□□□□ -0.73
GAPDH-201ENST00000229239 UBE2AP49459 152 aa10.49□□□□□ -0.73
GAPDH-201ENST00000229239 SCXQ7RTU7 201 aa10.49□□□□□ -0.73
GAPDH-201ENST00000229239 KRTAP11-1Q8IUC1 163 aa10.49□□□□□ -0.73
GAPDH-201ENST00000229239 DPH3Q96FX2 82 aa10.48□□□□□ -0.73
GAPDH-201ENST00000229239 DNAH17Q9UFH2 4485 aa10.47□□□□□ -0.73
GAPDH-201ENST00000229239 HECTD4Q9Y4D8 3996 aa10.47□□□□□ -0.73
GAPDH-201ENST00000229239 IGKV4-1P06312 121 aa10.47□□□□□ -0.73
GAPDH-201ENST00000229239 SVIPQ8NHG7 77 aa10.45□□□□□ -0.74
GAPDH-201ENST00000229239 DNAH2Q9P225 4427 aa10.45□□□□□ -0.74
GAPDH-201ENST00000229239 TMEM258P61165 79 aa10.44□□□□□ -0.74
GAPDH-201ENST00000229239 IGFL1Q6UW32 110 aa10.44□□□□□ -0.74
GAPDH-201ENST00000229239 PANO1I0J062 215 aa10.44□□□□□ -0.74
GAPDH-201ENST00000229239 KRTAP13-1Q8IUC0 172 aa10.43□□□□□ -0.74
GAPDH-201ENST00000229239 FAT2Q9NYQ8 4349 aa10.43□□□□□ -0.74
GAPDH-201ENST00000229239 RTL8CO15255 209 aa10.42□□□□□ -0.74
GAPDH-201ENST00000229239 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.42□□□□□ -0.74
GAPDH-201ENST00000229239 LINC00336Q6ZUF6 198 aa10.42□□□□□ -0.74
GAPDH-201ENST00000229239 C1orf134Q5TEV5 83 aa10.4□□□□□ -0.74
GAPDH-201ENST00000229239 KLKP1Q107X0 134 aa10.38□□□□□ -0.75
GAPDH-201ENST00000229239 C20orf197Q8N268 126 aa10.37□□□□□ -0.75
GAPDH-201ENST00000229239 Q8N9L7 120 aa10.37□□□□□ -0.75
GAPDH-201ENST00000229239 PLAC8Q9NZF1 115 aa10.37□□□□□ -0.75
GAPDH-201ENST00000229239 ZNF706Q9Y5V0 76 aaPredicted RBP10.37□□□□□ -0.75
GAPDH-201ENST00000229239 RPL37AP61513 92 aaKnown RBP10.36□□□□□ -0.75
GAPDH-201ENST00000229239 NDUFC1O43677 76 aa10.35□□□□□ -0.75
GAPDH-201ENST00000229239 RPS28P62857 69 aaKnown RBP10.34□□□□□ -0.75
GAPDH-201ENST00000229239 PKHD1P08F94 4074 aa10.34□□□□□ -0.75
GAPDH-201ENST00000229239 IGLV5-52A0A0A0MRZ9 124 aa10.34□□□□□ -0.75
GAPDH-201ENST00000229239 DSCR10P59022 87 aa10.34□□□□□ -0.75
GAPDH-201ENST00000229239 CYSTM1Q9H1C7 97 aa10.34□□□□□ -0.75
GAPDH-201ENST00000229239 PKD1P98161 4303 aa10.33□□□□□ -0.76
GAPDH-201ENST00000229239 HERC2O95714 4834 aa10.32□□□□□ -0.76
GAPDH-201ENST00000229239 A0A087WSZ3 146 aa10.32□□□□□ -0.76
GAPDH-201ENST00000229239 A0A1B0GVY2 172 aa10.32□□□□□ -0.76
GAPDH-201ENST00000229239 OCR1Q9BZK8 76 aa10.32□□□□□ -0.76
GAPDH-201ENST00000229239 LINC00483Q53H64 154 aa10.31□□□□□ -0.76
GAPDH-201ENST00000229239 DYNC1H1Q14204 4646 aaKnown RBP10.29□□□□□ -0.76
GAPDH-201ENST00000229239 A0A0G2JQZ4 141 aa10.29□□□□□ -0.76
GAPDH-201ENST00000229239 J3KT08 172 aa10.28□□□□□ -0.76
GAPDH-201ENST00000229239 DNAH11Q96DT5 4516 aa10.28□□□□□ -0.76
GAPDH-201ENST00000229239 KIAA1109Q2LD37 5005 aa10.27□□□□□ -0.77
GAPDH-201ENST00000229239 K7EQZ3 153 aa10.27□□□□□ -0.77
GAPDH-201ENST00000229239 PSORS1C2Q9UIG4 136 aa10.27□□□□□ -0.77
GAPDH-201ENST00000229239 TMEM254Q8TBM7 123 aa10.26□□□□□ -0.77
GAPDH-201ENST00000229239 HCG22E2RYF7 251 aa10.25□□□□□ -0.77
GAPDH-201ENST00000229239 ZNF861PO60384 105 aa10.25□□□□□ -0.77
GAPDH-201ENST00000229239 H7BZZ5 65 aa10.25□□□□□ -0.77
GAPDH-201ENST00000229239 LINC00472Q9H8W2 130 aa10.22□□□□□ -0.77
GAPDH-201ENST00000229239 FAM236DA0A1B0GTK5 79 aa10.21□□□□□ -0.77
GAPDH-201ENST00000229239 FAM236CP0DP71 79 aa10.21□□□□□ -0.77
GAPDH-201ENST00000229239 ATP5EP56381 51 aaPredicted RBP10.21□□□□□ -0.77
GAPDH-201ENST00000229239 SNURFQ9Y675 71 aa10.2□□□□□ -0.78
GAPDH-201ENST00000229239 A0A0U1RQV1 116 aa10.19□□□□□ -0.78
GAPDH-201ENST00000229239 A8MWP4 228 aa10.19□□□□□ -0.78
GAPDH-201ENST00000229239 C5orf47Q569G3 176 aa10.18□□□□□ -0.78
GAPDH-201ENST00000229239 PRR15Q8IV56 129 aa10.18□□□□□ -0.78
GAPDH-201ENST00000229239 IGLV9-49A0A0B4J1Y8 123 aa10.17□□□□□ -0.78
GAPDH-201ENST00000229239 IGLV7-43P04211 117 aa10.15□□□□□ -0.78
GAPDH-201ENST00000229239 DEFB116Q30KQ4 102 aa10.15□□□□□ -0.78
GAPDH-201ENST00000229239 FAM30AQ9NZY2 134 aa10.15□□□□□ -0.78
GAPDH-201ENST00000229239 RYR1P21817 5038 aa10.15□□□□□ -0.79
GAPDH-201ENST00000229239 NDUFB1O75438 58 aa10.15□□□□□ -0.79
GAPDH-201ENST00000229239 LRP1BQ9NZR2 4599 aa10.12□□□□□ -0.79
GAPDH-201ENST00000229239 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
GAPDH-201ENST00000229239 SERP1Q9Y6X1 66 aa10.12□□□□□ -0.79
GAPDH-201ENST00000229239 KRTAP10-2P60368 255 aa10.11□□□□□ -0.79
GAPDH-201ENST00000229239 CASC2Q6XLA1 102 aa10.1□□□□□ -0.79
GAPDH-201ENST00000229239 MOBPQ13875 183 aa10.09□□□□□ -0.79
GAPDH-201ENST00000229239 Q6ZSA8 131 aa10.09□□□□□ -0.79
GAPDH-201ENST00000229239 CIRBP-AS1Q8TBR5 109 aa10.08□□□□□ -0.8
GAPDH-201ENST00000229239 DNAH5Q8TE73 4624 aa10.08□□□□□ -0.8
GAPDH-201ENST00000229239 SRRM2Q9UQ35 2752 aaKnown RBP10.08□□□□□ -0.8
GAPDH-201ENST00000229239 PCLOQ9Y6V0 5065 aa10.08□□□□□ -0.8
GAPDH-201ENST00000229239 WFDC13Q8IUB5 93 aa10.08□□□□□ -0.8
GAPDH-201ENST00000229239 HSPG2P98160 4391 aa10.08□□□□□ -0.8
GAPDH-201ENST00000229239 KRTAP17-1Q9BYP8 105 aa10.07□□□□□ -0.8
GAPDH-201ENST00000229239 H3BPC8 53 aa10.06□□□□□ -0.8
GAPDH-201ENST00000229239 CD164Q04900 197 aa10.06□□□□□ -0.8
GAPDH-201ENST00000229239 MP68P56378 58 aa10.06□□□□□ -0.8
GAPDH-201ENST00000229239 Q96NJ1 140 aa10.06□□□□□ -0.8
GAPDH-201ENST00000229239 SSBP3-AS1Q7Z2R9 100 aa10.05□□□□□ -0.8
GAPDH-201ENST00000229239 ZCCHC13Q8WW36 166 aaKnown RBP10.05□□□□□ -0.8
GAPDH-201ENST00000229239 APOBP04114 4563 aaKnown RBP10.04□□□□□ -0.8
GAPDH-201ENST00000229239 CDK2AP2O75956 126 aa10.04□□□□□ -0.8
GAPDH-201ENST00000229239 ANAPC11Q9NYG5 84 aa10.02□□□□□ -0.81
GAPDH-201ENST00000229239 MMP24-AS1A0A0U1RRL7 71 aa10□□□□□ -0.81
GAPDH-201ENST00000229239 KRTAP10-1P60331 282 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms