RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 KCNQ1DNQ9H478 68 aa13.62□□□□□ -0.23
FMR1-201ENST00000218200 CASC10Q5T4H9 136 aa13.61□□□□□ -0.23
FMR1-201ENST00000218200 IGFL1Q6UW32 110 aa13.61□□□□□ -0.23
FMR1-201ENST00000218200 CELSR1Q9NYQ6 3014 aa13.61□□□□□ -0.23
FMR1-201ENST00000218200 IGLV1-50A0A075B6I6 118 aa13.6□□□□□ -0.23
FMR1-201ENST00000218200 A0A1B0GU69 56 aa13.59□□□□□ -0.23
FMR1-201ENST00000218200 SPENQ96T58 3664 aaKnown RBP13.59□□□□□ -0.23
FMR1-201ENST00000218200 A0A1W2PNM2 257 aa13.58□□□□□ -0.24
FMR1-201ENST00000218200 H3BNG1 76 aa13.58□□□□□ -0.24
FMR1-201ENST00000218200 DNAH10OSP0CZ25 163 aa13.58□□□□□ -0.24
FMR1-201ENST00000218200 C16orf90A8MZG2 172 aa13.56□□□□□ -0.24
FMR1-201ENST00000218200 C1orf134Q5TEV5 83 aa13.56□□□□□ -0.24
FMR1-201ENST00000218200 ANAPC11Q9NYG5 84 aa13.56□□□□□ -0.24
FMR1-201ENST00000218200 A0A1B0GW54 56 aa13.52□□□□□ -0.25
FMR1-201ENST00000218200 COA5Q86WW8 74 aa13.52□□□□□ -0.25
FMR1-201ENST00000218200 ATP11AUNQ6ZP68 121 aa13.52□□□□□ -0.25
FMR1-201ENST00000218200 Q8NDZ9 215 aa13.51□□□□□ -0.25
FMR1-201ENST00000218200 KRTAP10-11P60412 298 aa13.51□□□□□ -0.25
FMR1-201ENST00000218200 TP53AIP1Q9HCN2 124 aa13.5□□□□□ -0.25
FMR1-201ENST00000218200 C7orf65Q6ZTY9 151 aa13.5□□□□□ -0.25
FMR1-201ENST00000218200 A8MWP4 228 aa13.49□□□□□ -0.25
FMR1-201ENST00000218200 BSNQ9UPA5 3926 aa13.48□□□□□ -0.25
FMR1-201ENST00000218200 ACYP2P14621 99 aa13.47□□□□□ -0.25
FMR1-201ENST00000218200 PRR15Q8IV56 129 aa13.44□□□□□ -0.26
FMR1-201ENST00000218200 LINC01600Q96MT4 127 aa13.43□□□□□ -0.26
FMR1-201ENST00000218200 NBDYA0A0U1RRE5 68 aa13.42□□□□□ -0.26
FMR1-201ENST00000218200 H3BPC8 53 aa13.39□□□□□ -0.27
FMR1-201ENST00000218200 RTL8CO15255 209 aa13.38□□□□□ -0.27
FMR1-201ENST00000218200 LINC00313P59037 77 aa13.36□□□□□ -0.27
FMR1-201ENST00000218200 MRPL34Q9BQ48 92 aaKnown RBP13.36□□□□□ -0.27
FMR1-201ENST00000218200 OCR1Q9BZK8 76 aa13.35□□□□□ -0.27
FMR1-201ENST00000218200 KMT2BQ9UMN6 2715 aaPredicted RBP13.33□□□□□ -0.27
FMR1-201ENST00000218200 C8orf17Q9NRJ1 99 aa13.32□□□□□ -0.28
FMR1-201ENST00000218200 DSCR10P59022 87 aa13.31□□□□□ -0.28
FMR1-201ENST00000218200 LOC101927531A0A1B0GV80 90 aa13.31□□□□□ -0.28
FMR1-201ENST00000218200 NIPBLQ6KC79 2804 aaeCLIP13.31□□□□□ -0.28
FMR1-201ENST00000218200 FAM229BQ4G0N7 80 aa13.3□□□□□ -0.28
FMR1-201ENST00000218200 K7EIL1 84 aa13.29□□□□□ -0.28
FMR1-201ENST00000218200 IGLV5-48A0A075B6I7 105 aa13.27□□□□□ -0.28
FMR1-201ENST00000218200 OXTP01178 125 aa13.27□□□□□ -0.28
FMR1-201ENST00000218200 PRR26Q8N8Z3 221 aa13.27□□□□□ -0.29
FMR1-201ENST00000218200 Q5XG85 94 aa13.26□□□□□ -0.29
FMR1-201ENST00000218200 FP248Q71RG6 208 aaPredicted RBP13.25□□□□□ -0.29
FMR1-201ENST00000218200 Q96NJ1 140 aa13.25□□□□□ -0.29
FMR1-201ENST00000218200 C8orf87E5RJ46 101 aa13.21□□□□□ -0.29
FMR1-201ENST00000218200 WIPF1O43516 503 aa13.21□□□□□ -0.3
FMR1-201ENST00000218200 CYP4F30PQ9H0H9 118 aa13.2□□□□□ -0.3
FMR1-201ENST00000218200 TYMSOSQ8TAI1 123 aa13.19□□□□□ -0.3
FMR1-201ENST00000218200 A0A1B0GVX0 72 aa13.19□□□□□ -0.3
FMR1-201ENST00000218200 C9orf163Q8N9P6 203 aa13.19□□□□□ -0.3
FMR1-201ENST00000218200 TLX1NBP0CAT3 122 aa13.17□□□□□ -0.3
FMR1-201ENST00000218200 FAM229AH3BQW9 127 aa13.15□□□□□ -0.3
FMR1-201ENST00000218200 PLA2G1BP04054 148 aaKnown RBP13.13□□□□□ -0.31
FMR1-201ENST00000218200 PSORS1C2Q9UIG4 136 aa13.12□□□□□ -0.31
FMR1-201ENST00000218200 UQCR11O14957 56 aa13.11□□□□□ -0.31
FMR1-201ENST00000218200 ZNF861PO60384 105 aa13.1□□□□□ -0.31
FMR1-201ENST00000218200 CUBNO60494 3623 aa13.1□□□□□ -0.31
FMR1-201ENST00000218200 CSMD2Q7Z408 3487 aa13.1□□□□□ -0.31
FMR1-201ENST00000218200 PLA2G2DQ9UNK4 145 aa13.09□□□□□ -0.31
FMR1-201ENST00000218200 TENM4Q6N022 2769 aa13.08□□□□□ -0.32
FMR1-201ENST00000218200 MIR22HGQ0VDD5 57 aa13.05□□□□□ -0.32
FMR1-201ENST00000218200 SSBP3-AS1Q7Z2R9 100 aa13.05□□□□□ -0.32
FMR1-201ENST00000218200 SPRR4Q96PI1 79 aa13.04□□□□□ -0.32
FMR1-201ENST00000218200 A0A087WTM6 91 aa13.04□□□□□ -0.32
FMR1-201ENST00000218200 KTN1-AS1Q86SY8 53 aa13.03□□□□□ -0.32
FMR1-201ENST00000218200 CD164Q04900 197 aa13.03□□□□□ -0.32
FMR1-201ENST00000218200 Q8N1X5 172 aa13.03□□□□□ -0.32
FMR1-201ENST00000218200 C9orf92A6NGG3 77 aa13.02□□□□□ -0.32
FMR1-201ENST00000218200 SMR3BP02814 79 aaPredicted RBP13.01□□□□□ -0.33
FMR1-201ENST00000218200 CNBPP62633 177 aaKnown RBP12.96□□□□□ -0.33
FMR1-201ENST00000218200 Q1T7F1 81 aa12.96□□□□□ -0.33
FMR1-201ENST00000218200 SPANXA2-OT1Q8N9U9 137 aa12.96□□□□□ -0.33
FMR1-201ENST00000218200 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.94□□□□□ -0.34
FMR1-201ENST00000218200 PDZD2O15018 2839 aa12.94□□□□□ -0.34
FMR1-201ENST00000218200 KRTAP26-1Q6PEX3 210 aa12.92□□□□□ -0.34
FMR1-201ENST00000218200 Q8N9P0 234 aaPredicted RBP12.92□□□□□ -0.34
FMR1-201ENST00000218200 SPINT4Q6UDR6 99 aa12.91□□□□□ -0.34
FMR1-201ENST00000218200 IGLV5-37A0A075B6J1 123 aa12.9□□□□□ -0.34
FMR1-201ENST00000218200 CDC42SE1Q9NRR8 79 aa12.89□□□□□ -0.35
FMR1-201ENST00000218200 TENM1Q9UKZ4 2725 aa12.88□□□□□ -0.35
FMR1-201ENST00000218200 IGLV7-43P04211 117 aa12.88□□□□□ -0.35
FMR1-201ENST00000218200 APLNQ9ULZ1 77 aa12.88□□□□□ -0.35
FMR1-201ENST00000218200 TENM3Q9P273 2699 aa12.87□□□□□ -0.35
FMR1-201ENST00000218200 PRAC1Q96KF2 57 aa12.86□□□□□ -0.35
FMR1-201ENST00000218200 VWFP04275 2813 aa12.86□□□□□ -0.35
FMR1-201ENST00000218200 NBPF19A0A087WUL8 3843 aa12.86□□□□□ -0.35
FMR1-201ENST00000218200 LCA10Q71F78 164 aa12.84□□□□□ -0.35
FMR1-201ENST00000218200 MMP24-AS1A0A0U1RRL7 71 aa12.82□□□□□ -0.36
FMR1-201ENST00000218200 IGLV7-46A0A075B6I9 117 aa12.82□□□□□ -0.36
FMR1-201ENST00000218200 SPRR1AP35321 89 aa12.82□□□□□ -0.36
FMR1-201ENST00000218200 VPS13CQ709C8 3753 aa12.81□□□□□ -0.36
FMR1-201ENST00000218200 A0A0D9SG42 100 aa12.81□□□□□ -0.36
FMR1-201ENST00000218200 RBM12B-AS1Q9P1G2 102 aa12.8□□□□□ -0.36
FMR1-201ENST00000218200 OTOGQ6ZRI0 2925 aa12.8□□□□□ -0.36
FMR1-201ENST00000218200 KRTAP1-5Q9BYS1 174 aa12.79□□□□□ -0.36
FMR1-201ENST00000218200 Q5VV11 94 aa12.79□□□□□ -0.36
FMR1-201ENST00000218200 HRES1P13985 223 aa12.79□□□□□ -0.36
FMR1-201ENST00000218200 LINC00304Q8N9R0 145 aa12.76□□□□□ -0.37
FMR1-201ENST00000218200 TNP2Q05952 138 aa12.75□□□□□ -0.37
FMR1-201ENST00000218200 SPINK7P58062 85 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms