RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 IGLV9-49A0A0B4J1Y8 123 aa16.11■□□□□ 0.17
CHMP4B-201ENST00000217402 KRTAP29-1A8MX34 341 aaPredicted RBP16.1■□□□□ 0.17
CHMP4B-201ENST00000217402 OCIAD2Q56VL3 154 aa16.09■□□□□ 0.17
CHMP4B-201ENST00000217402 TRBV20-1A0A075B6N2 111 aa16.08■□□□□ 0.17
CHMP4B-201ENST00000217402 ORMDL1Q9P0S3 153 aa16.08■□□□□ 0.16
CHMP4B-201ENST00000217402 LAMTOR3Q9UHA4 124 aa16.08■□□□□ 0.16
CHMP4B-201ENST00000217402 SMIM29Q86T20 159 aa16.07■□□□□ 0.16
CHMP4B-201ENST00000217402 TYMSOSQ8TAI1 123 aa16.05■□□□□ 0.16
CHMP4B-201ENST00000217402 MT1HL1P0DM35 61 aa16.05■□□□□ 0.16
CHMP4B-201ENST00000217402 MOBPQ13875 183 aa16.05■□□□□ 0.16
CHMP4B-201ENST00000217402 C9orf153Q5TBE3 101 aa16.05■□□□□ 0.16
CHMP4B-201ENST00000217402 PPDPFLQ8WWR9 84 aa16.05■□□□□ 0.16
CHMP4B-201ENST00000217402 KRTAP10-8P60410 259 aa16.04■□□□□ 0.16
CHMP4B-201ENST00000217402 SPCS1Q9Y6A9 102 aa16.04■□□□□ 0.16
CHMP4B-201ENST00000217402 J3QL48 77 aa16.01■□□□□ 0.15
CHMP4B-201ENST00000217402 GHRHP01286 108 aa16.01■□□□□ 0.15
CHMP4B-201ENST00000217402 F8WEM9 126 aa15.97■□□□□ 0.15
CHMP4B-201ENST00000217402 H3BMG7 143 aa15.97■□□□□ 0.15
CHMP4B-201ENST00000217402 TNXBP22105 4242 aa15.97■□□□□ 0.15
CHMP4B-201ENST00000217402 Q8NBF4 154 aa15.97■□□□□ 0.15
CHMP4B-201ENST00000217402 C9JAW5 83 aa15.96■□□□□ 0.15
CHMP4B-201ENST00000217402 TMEM256-PLSCR3K7ERE1 68 aa15.95■□□□□ 0.14
CHMP4B-201ENST00000217402 BAALC-AS2P0C853 105 aa15.95■□□□□ 0.14
CHMP4B-201ENST00000217402 H3BQ85 93 aa15.94■□□□□ 0.14
CHMP4B-201ENST00000217402 NDUFV3P56181 108 aaKnown RBP15.94■□□□□ 0.14
CHMP4B-201ENST00000217402 K7EP34 96 aa15.93■□□□□ 0.14
CHMP4B-201ENST00000217402 MTURNQ8N3F0 131 aa15.92■□□□□ 0.14
CHMP4B-201ENST00000217402 SSBP3-AS1Q7Z2R9 100 aa15.9■□□□□ 0.14
CHMP4B-201ENST00000217402 A0A1B0GV72 72 aa15.9■□□□□ 0.14
CHMP4B-201ENST00000217402 LINC00304Q8N9R0 145 aa15.87■□□□□ 0.13
CHMP4B-201ENST00000217402 A0A0G2JQZ4 141 aa15.86■□□□□ 0.13
CHMP4B-201ENST00000217402 UBE2V1Q13404 147 aa15.86■□□□□ 0.13
CHMP4B-201ENST00000217402 DMBT1Q9UGM3 2413 aaPredicted RBP15.86■□□□□ 0.13
CHMP4B-201ENST00000217402 ANKRD29Q8N6D5 301 aa15.85■□□□□ 0.13
CHMP4B-201ENST00000217402 GTF2H5Q6ZYL4 71 aa15.84■□□□□ 0.13
CHMP4B-201ENST00000217402 IGLV8-61A0A075B6I0 122 aa15.83■□□□□ 0.13
CHMP4B-201ENST00000217402 H3BT86 120 aa15.79■□□□□ 0.12
CHMP4B-201ENST00000217402 C4orf48Q5BLP8 95 aa15.79■□□□□ 0.12
CHMP4B-201ENST00000217402 Q6JHZ5 121 aa15.79■□□□□ 0.12
CHMP4B-201ENST00000217402 IGFL1Q6UW32 110 aa15.79■□□□□ 0.12
CHMP4B-201ENST00000217402 HRCT1Q6UXD1 115 aa15.79■□□□□ 0.12
CHMP4B-201ENST00000217402 A0A1B0GV90 55 aa15.75■□□□□ 0.11
CHMP4B-201ENST00000217402 SPAG11AQ6PDA7 123 aa15.74■□□□□ 0.11
CHMP4B-201ENST00000217402 PRO0461Q9UI25 63 aa15.73■□□□□ 0.11
CHMP4B-201ENST00000217402 SMCPP49901 116 aaPredicted RBP15.72■□□□□ 0.11
CHMP4B-201ENST00000217402 RBM3P98179 157 aaKnown RBP15.72■□□□□ 0.11
CHMP4B-201ENST00000217402 SPINK1P00995 79 aa15.69■□□□□ 0.1
CHMP4B-201ENST00000217402 JMJD7-PLA2G4BH0Y9G9 81 aa15.68■□□□□ 0.1
CHMP4B-201ENST00000217402 CD164Q04900 197 aa15.67■□□□□ 0.1
CHMP4B-201ENST00000217402 DSCR8Q96T75 97 aa15.66■□□□□ 0.1
CHMP4B-201ENST00000217402 TRBV7-4A0A0J9YYF1 115 aa15.64■□□□□ 0.09
CHMP4B-201ENST00000217402 OBSCN-AS1Q96MR7 158 aa15.62■□□□□ 0.09
CHMP4B-201ENST00000217402 C14orf132Q9NPU4 83 aa15.62■□□□□ 0.09
CHMP4B-201ENST00000217402 F8W1H4 67 aa15.61■□□□□ 0.09
CHMP4B-201ENST00000217402 A0A1W2PNM2 257 aa15.6■□□□□ 0.09
CHMP4B-201ENST00000217402 TEN1Q86WV5 123 aa15.6■□□□□ 0.09
CHMP4B-201ENST00000217402 CCKP06307 115 aa15.59■□□□□ 0.09
CHMP4B-201ENST00000217402 RPS29P62273 56 aaKnown RBP15.59■□□□□ 0.09
CHMP4B-201ENST00000217402 TRBV7-7A0A0K0K1E9 115 aa15.58■□□□□ 0.09
CHMP4B-201ENST00000217402 VPS25Q9BRG1 176 aa15.58■□□□□ 0.09
CHMP4B-201ENST00000217402 Q6Q795 121 aa15.57■□□□□ 0.08
CHMP4B-201ENST00000217402 LIMD2Q9BT23 127 aa15.56■□□□□ 0.08
CHMP4B-201ENST00000217402 HERC1Q15751 4861 aa15.56■□□□□ 0.08
CHMP4B-201ENST00000217402 RETNLBQ9BQ08 111 aa15.54■□□□□ 0.08
CHMP4B-201ENST00000217402 LOC110117498A0A087WWA1 95 aa15.54■□□□□ 0.08
CHMP4B-201ENST00000217402 Q6ZQT0 140 aa15.54■□□□□ 0.08
CHMP4B-201ENST00000217402 A0A087WSZ3 146 aa15.5■□□□□ 0.07
CHMP4B-201ENST00000217402 PDE6GP18545 87 aa15.49■□□□□ 0.07
CHMP4B-201ENST00000217402 ETDBQ3ZM63 59 aa15.49■□□□□ 0.07
CHMP4B-201ENST00000217402 Q5XG85 94 aa15.46■□□□□ 0.07
CHMP4B-201ENST00000217402 SS18L2Q9UHA2 77 aa15.42■□□□□ 0.06
CHMP4B-201ENST00000217402 PRR4Q16378 134 aa15.4■□□□□ 0.06
CHMP4B-201ENST00000217402 C1orf195Q5TG92 126 aa15.36■□□□□ 0.05
CHMP4B-201ENST00000217402 C21orf62-AS1Q17RA5 79 aa15.35■□□□□ 0.05
CHMP4B-201ENST00000217402 ASB16-AS1Q495Z4 193 aa15.35■□□□□ 0.05
CHMP4B-201ENST00000217402 A0A1B0GW54 56 aa15.3■□□□□ 0.04
CHMP4B-201ENST00000217402 FP248Q71RG6 208 aaPredicted RBP15.29■□□□□ 0.04
CHMP4B-201ENST00000217402 IGLV7-46A0A075B6I9 117 aa15.28■□□□□ 0.04
CHMP4B-201ENST00000217402 Q96NJ1 140 aa15.26■□□□□ 0.03
CHMP4B-201ENST00000217402 HMCN2Q8NDA2 5059 aa15.23■□□□□ 0.03
CHMP4B-201ENST00000217402 DEFB116Q30KQ4 102 aa15.22■□□□□ 0.03
CHMP4B-201ENST00000217402 LINC00472Q9H8W2 130 aa15.21■□□□□ 0.02
CHMP4B-201ENST00000217402 NREPQ16612 68 aa15.17■□□□□ 0.02
CHMP4B-201ENST00000217402 SIGMAR1Q99720 223 aa15.17■□□□□ 0.02
CHMP4B-201ENST00000217402 IGKV4-1P06312 121 aa15.16■□□□□ 0.02
CHMP4B-201ENST00000217402 LINC00846Q9NV44 126 aa15.14■□□□□ 0.01
CHMP4B-201ENST00000217402 Q6ZVQ6 151 aa15.1■□□□□ 0.01
CHMP4B-201ENST00000217402 TPRXLQ17RH7 258 aa15.09■□□□□ 0.01
CHMP4B-201ENST00000217402 KRTAP13-3Q3SY46 172 aa15.09■□□□□ 0.01
CHMP4B-201ENST00000217402 UBL5Q9BZL1 73 aa15.06■□□□□ 0
CHMP4B-201ENST00000217402 LPAP08519 4548 aa15.06■□□□□ 0
CHMP4B-201ENST00000217402 C9orf92A6NGG3 77 aa15.06■□□□□ 0
CHMP4B-201ENST00000217402 J3KT08 172 aa15.05■□□□□ -0
CHMP4B-201ENST00000217402 FAM240AA0A1B0GVK7 77 aa15.01□□□□□ -0.01
CHMP4B-201ENST00000217402 ACYP1P07311 99 aa15.01□□□□□ -0.01
CHMP4B-201ENST00000217402 CDIP1Q9H305 208 aa15□□□□□ -0.01
CHMP4B-201ENST00000217402 BPY2O14599 106 aa14.98□□□□□ -0.01
CHMP4B-201ENST00000217402 LRP2P98164 4655 aa14.96□□□□□ -0.01
CHMP4B-201ENST00000217402 IGHV6-1A0A0B4J1U7 121 aa14.95□□□□□ -0.02
CHMP4B-201ENST00000217402 A8MWP4 228 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 269.5 ms