RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 A0A1W2PNN7 141 aa9.2□□□□□ -0.94
SCARB2-227ENST00000640957 PRYO14603 147 aa9.2□□□□□ -0.94
SCARB2-227ENST00000640957 CXCL6P80162 114 aa9.2□□□□□ -0.94
SCARB2-227ENST00000640957 C6orf48Q9UBA6 75 aa9.18□□□□□ -0.94
SCARB2-227ENST00000640957 V9GYY9 64 aa9.18□□□□□ -0.94
SCARB2-227ENST00000640957 A0A1B0GUV1 79 aa9.18□□□□□ -0.94
SCARB2-227ENST00000640957 IGLV6-57P01721 117 aa9.18□□□□□ -0.94
SCARB2-227ENST00000640957 SMIM29Q86T20 159 aa9.18□□□□□ -0.94
SCARB2-227ENST00000640957 LINC00612Q8N6U2 182 aa9.18□□□□□ -0.94
SCARB2-227ENST00000640957 A8MU10 97 aa9.17□□□□□ -0.94
SCARB2-227ENST00000640957 IGKV4-1P06312 121 aa9.17□□□□□ -0.94
SCARB2-227ENST00000640957 COX17Q14061 63 aa9.17□□□□□ -0.94
SCARB2-227ENST00000640957 SEC61GP60059 68 aa9.17□□□□□ -0.94
SCARB2-227ENST00000640957 ESRGQ1W209 222 aa9.16□□□□□ -0.94
SCARB2-227ENST00000640957 SRRM2Q9UQ35 2752 aaKnown RBP9.15□□□□□ -0.94
SCARB2-227ENST00000640957 CSMD3Q7Z407 3707 aa9.15□□□□□ -0.94
SCARB2-227ENST00000640957 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
SCARB2-227ENST00000640957 RETNQ9HD89 108 aa9.13□□□□□ -0.95
SCARB2-227ENST00000640957 CAMK2N2Q96S95 79 aa9.13□□□□□ -0.95
SCARB2-227ENST00000640957 X6R8D5 127 aa9.13□□□□□ -0.95
SCARB2-227ENST00000640957 RPL37AP8A6NKH3 93 aa9.12□□□□□ -0.95
SCARB2-227ENST00000640957 OCR1Q9BZK8 76 aa9.12□□□□□ -0.95
SCARB2-227ENST00000640957 C9orf66Q5T8R8 295 aa9.12□□□□□ -0.95
SCARB2-227ENST00000640957 Q6ZTC4 211 aa9.12□□□□□ -0.95
SCARB2-227ENST00000640957 NDUFC1O43677 76 aa9.11□□□□□ -0.95
SCARB2-227ENST00000640957 TENM3Q9P273 2699 aa9.1□□□□□ -0.95
SCARB2-227ENST00000640957 PDE6GP18545 87 aa9.09□□□□□ -0.95
SCARB2-227ENST00000640957 APOC4P55056 127 aa9.09□□□□□ -0.95
SCARB2-227ENST00000640957 ELOF1P60002 83 aaKnown RBP9.09□□□□□ -0.95
SCARB2-227ENST00000640957 Q6ZRU5 148 aa9.09□□□□□ -0.95
SCARB2-227ENST00000640957 C1orf64Q8NEQ6 169 aa9.09□□□□□ -0.95
SCARB2-227ENST00000640957 SPART-AS1P0CW21 52 aa9.08□□□□□ -0.96
SCARB2-227ENST00000640957 ST20-AS1Q8NBB2 130 aa9.07□□□□□ -0.96
SCARB2-227ENST00000640957 BCE1O60756 84 aa9.06□□□□□ -0.96
SCARB2-227ENST00000640957 Q6ZRP5 223 aa9.06□□□□□ -0.96
SCARB2-227ENST00000640957 F8WDY8 70 aa9.05□□□□□ -0.96
SCARB2-227ENST00000640957 IGHV4-30-4P0DP06 118 aa9.05□□□□□ -0.96
SCARB2-227ENST00000640957 VPREB1P12018 145 aa9.05□□□□□ -0.96
SCARB2-227ENST00000640957 WFDC10BQ8IUB3 73 aa9.05□□□□□ -0.96
SCARB2-227ENST00000640957 ANK3Q12955 4377 aaKnown RBP9.05□□□□□ -0.96
SCARB2-227ENST00000640957 A0A0J9YWU9 116 aa9.05□□□□□ -0.96
SCARB2-227ENST00000640957 WFDC13Q8IUB5 93 aa9.04□□□□□ -0.96
SCARB2-227ENST00000640957 LYRM9A8MSI8 78 aa9.03□□□□□ -0.96
SCARB2-227ENST00000640957 A8MUN3 132 aa9.03□□□□□ -0.96
SCARB2-227ENST00000640957 LINC00528Q8N1L1 170 aa9.03□□□□□ -0.96
SCARB2-227ENST00000640957 K7EQZ3 153 aa9.02□□□□□ -0.96
SCARB2-227ENST00000640957 Q8N377 158 aa9.02□□□□□ -0.97
SCARB2-227ENST00000640957 IGKV2D-24A0A075B6R9 120 aa9.02□□□□□ -0.97
SCARB2-227ENST00000640957 KPRPQ5T749 579 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-227ENST00000640957 FAM168BA1KXE4 195 aa9.01□□□□□ -0.97
SCARB2-227ENST00000640957 ATP5EP56381 51 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-227ENST00000640957 hDV103S1A0JD37 113 aa9□□□□□ -0.97
SCARB2-227ENST00000640957 SERTAD4-AS1Q5TG53 156 aa9□□□□□ -0.97
SCARB2-227ENST00000640957 COL7A1Q02388 2944 aa9□□□□□ -0.97
SCARB2-227ENST00000640957 A0A1W2PNM2 257 aa9□□□□□ -0.97
SCARB2-227ENST00000640957 KMT2BQ9UMN6 2715 aaPredicted RBP8.99□□□□□ -0.97
SCARB2-227ENST00000640957 M0R378 163 aa8.99□□□□□ -0.97
SCARB2-227ENST00000640957 TRAV22A0A0B4J277 110 aa8.99□□□□□ -0.97
SCARB2-227ENST00000640957 NKAPP1Q8N9T2 125 aa8.98□□□□□ -0.97
SCARB2-227ENST00000640957 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.98□□□□□ -0.97
SCARB2-227ENST00000640957 PMAIP1Q13794 54 aa8.98□□□□□ -0.97
SCARB2-227ENST00000640957 SPTSSBQ8NFR3 76 aa8.98□□□□□ -0.97
SCARB2-227ENST00000640957 RPL37AP61513 92 aaKnown RBP8.97□□□□□ -0.97
SCARB2-227ENST00000640957 C1orf137Q5JT78 98 aa8.97□□□□□ -0.97
SCARB2-227ENST00000640957 LELP1Q5T871 98 aa8.96□□□□□ -0.98
SCARB2-227ENST00000640957 ERC2-IT1O76042 136 aa8.95□□□□□ -0.98
SCARB2-227ENST00000640957 Q8NAQ8 132 aa8.95□□□□□ -0.98
SCARB2-227ENST00000640957 C7orf33Q8WU49 177 aa8.95□□□□□ -0.98
SCARB2-227ENST00000640957 STAB2Q8WWQ8 2551 aa8.93□□□□□ -0.98
SCARB2-227ENST00000640957 DSCR10P59022 87 aa8.93□□□□□ -0.98
SCARB2-227ENST00000640957 LINC00208Q96KT6 92 aa8.92□□□□□ -0.98
SCARB2-227ENST00000640957 PRR34Q9NV39 138 aa8.92□□□□□ -0.98
SCARB2-227ENST00000640957 UBE2BP63146 152 aa8.92□□□□□ -0.98
SCARB2-227ENST00000640957 C15orf56Q8N910 161 aa8.92□□□□□ -0.98
SCARB2-227ENST00000640957 A0A096LNI7 61 aa8.91□□□□□ -0.98
SCARB2-227ENST00000640957 Q9BRP9 147 aa8.91□□□□□ -0.98
SCARB2-227ENST00000640957 ETDCA0A1B0GVM5 59 aa8.9□□□□□ -0.98
SCARB2-227ENST00000640957 TENM2Q9NT68 2774 aa8.9□□□□□ -0.98
SCARB2-227ENST00000640957 CHKB-CPT1BH3BT56 60 aa8.89□□□□□ -0.99
SCARB2-227ENST00000640957 EGFEM1PQ0D2K5 195 aa8.88□□□□□ -0.99
SCARB2-227ENST00000640957 DEFB131BA0A096LNP1 70 aa8.88□□□□□ -0.99
SCARB2-227ENST00000640957 GVQW2A0A096LPI5 108 aaPredicted RBP8.87□□□□□ -0.99
SCARB2-227ENST00000640957 H3BQ85 93 aa8.87□□□□□ -0.99
SCARB2-227ENST00000640957 PSCAO43653 123 aa8.86□□□□□ -0.99
SCARB2-227ENST00000640957 SYCNQ0VAF6 134 aa8.86□□□□□ -0.99
SCARB2-227ENST00000640957 CASC10Q5T4H9 136 aa8.86□□□□□ -0.99
SCARB2-227ENST00000640957 PRR15Q8IV56 129 aa8.85□□□□□ -0.99
SCARB2-227ENST00000640957 C11orf45Q8TAV5 145 aa8.85□□□□□ -0.99
SCARB2-227ENST00000640957 A0A087WSZ3 146 aa8.85□□□□□ -0.99
SCARB2-227ENST00000640957 PRR15LQ9BU68 103 aa8.85□□□□□ -0.99
SCARB2-227ENST00000640957 KRTAP10-11P60412 298 aa8.84□□□□□ -0.99
SCARB2-227ENST00000640957 HCG22E2RYF7 251 aa8.84□□□□□ -0.99
SCARB2-227ENST00000640957 Q8NBF4 154 aa8.83□□□□□ -1
SCARB2-227ENST00000640957 Q1T7F1 81 aa8.83□□□□□ -1
SCARB2-227ENST00000640957 IGLV5-48A0A075B6I7 105 aa8.83□□□□□ -1
SCARB2-227ENST00000640957 PRLHP81277 87 aa8.82□□□□□ -1
SCARB2-227ENST00000640957 Q6ZRX8 168 aa8.81□□□□□ -1
SCARB2-227ENST00000640957 KRTAP24-1Q3LI83 254 aa8.81□□□□□ -1
SCARB2-227ENST00000640957 ZCCHC13Q8WW36 166 aaKnown RBP8.81□□□□□ -1
SCARB2-227ENST00000640957 KRTAP26-1Q6PEX3 210 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms