RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 KRTAP10-3P60369 221 aa9.71□□□□□ -0.86
HNRNPU-226ENST00000640218 C19orf73Q9NVV2 129 aa9.7□□□□□ -0.86
HNRNPU-226ENST00000640218 PRR34Q9NV39 138 aa9.7□□□□□ -0.86
HNRNPU-226ENST00000640218 C9orf129Q5T035 196 aaKnown RBP9.68□□□□□ -0.86
HNRNPU-226ENST00000640218 GIG44P09565 113 aaPredicted RBP9.68□□□□□ -0.86
HNRNPU-226ENST00000640218 COA5Q86WW8 74 aa9.68□□□□□ -0.86
HNRNPU-226ENST00000640218 A0A0G2JQZ4 141 aa9.66□□□□□ -0.86
HNRNPU-226ENST00000640218 A0A1W2PNN7 141 aa9.66□□□□□ -0.86
HNRNPU-226ENST00000640218 ZNF861PO60384 105 aa9.66□□□□□ -0.86
HNRNPU-226ENST00000640218 A0A096LNT2 108 aa9.66□□□□□ -0.86
HNRNPU-226ENST00000640218 LINC00304Q8N9R0 145 aa9.66□□□□□ -0.86
HNRNPU-226ENST00000640218 LINC01600Q96MT4 127 aa9.66□□□□□ -0.86
HNRNPU-226ENST00000640218 Q8N377 158 aa9.65□□□□□ -0.86
HNRNPU-226ENST00000640218 C8orf17Q9NRJ1 99 aa9.65□□□□□ -0.86
HNRNPU-226ENST00000640218 OBSCN-AS1Q96MR7 158 aa9.65□□□□□ -0.87
HNRNPU-226ENST00000640218 A0A087WTM6 91 aa9.64□□□□□ -0.87
HNRNPU-226ENST00000640218 PRR15Q8IV56 129 aa9.63□□□□□ -0.87
HNRNPU-226ENST00000640218 SPINT4Q6UDR6 99 aa9.63□□□□□ -0.87
HNRNPU-226ENST00000640218 LINC00336Q6ZUF6 198 aa9.63□□□□□ -0.87
HNRNPU-226ENST00000640218 ANAPC11Q9NYG5 84 aa9.63□□□□□ -0.87
HNRNPU-226ENST00000640218 ERC2-IT1O76042 136 aa9.63□□□□□ -0.87
HNRNPU-226ENST00000640218 A8MUN3 132 aa9.61□□□□□ -0.87
HNRNPU-226ENST00000640218 A0A1B0GVX0 72 aa9.61□□□□□ -0.87
HNRNPU-226ENST00000640218 SSBP3-AS1Q7Z2R9 100 aa9.61□□□□□ -0.87
HNRNPU-226ENST00000640218 LINC00612Q8N6U2 182 aa9.59□□□□□ -0.87
HNRNPU-226ENST00000640218 C9orf163Q8N9P6 203 aa9.59□□□□□ -0.87
HNRNPU-226ENST00000640218 TLX1NBP0CAT3 122 aa9.58□□□□□ -0.88
HNRNPU-226ENST00000640218 PLA2G2DQ9UNK4 145 aa9.57□□□□□ -0.88
HNRNPU-226ENST00000640218 DNAH12Q6ZR08 3092 aa9.57□□□□□ -0.88
HNRNPU-226ENST00000640218 APLNQ9ULZ1 77 aa9.56□□□□□ -0.88
HNRNPU-226ENST00000640218 UQCR11O14957 56 aa9.56□□□□□ -0.88
HNRNPU-226ENST00000640218 LINC01554Q52M75 96 aa9.56□□□□□ -0.88
HNRNPU-226ENST00000640218 CASC10Q5T4H9 136 aa9.56□□□□□ -0.88
HNRNPU-226ENST00000640218 CEP350Q5VT06 3117 aa9.54□□□□□ -0.88
HNRNPU-226ENST00000640218 IGLV7-43P04211 117 aa9.54□□□□□ -0.88
HNRNPU-226ENST00000640218 PSORS1C2Q9UIG4 136 aa9.54□□□□□ -0.88
HNRNPU-226ENST00000640218 IGLV5-37A0A075B6J1 123 aa9.53□□□□□ -0.88
HNRNPU-226ENST00000640218 CYP4F30PQ9H0H9 118 aa9.52□□□□□ -0.88
HNRNPU-226ENST00000640218 RBM12B-AS1Q9P1G2 102 aa9.5□□□□□ -0.89
HNRNPU-226ENST00000640218 MIR22HGQ0VDD5 57 aa9.49□□□□□ -0.89
HNRNPU-226ENST00000640218 KLKP1Q107X0 134 aa9.48□□□□□ -0.89
HNRNPU-226ENST00000640218 SPRR4Q96PI1 79 aa9.48□□□□□ -0.89
HNRNPU-226ENST00000640218 PRRC2CQ9Y520 2896 aaKnown RBP9.48□□□□□ -0.89
HNRNPU-226ENST00000640218 KRTAP1-3Q8IUG1 177 aa9.48□□□□□ -0.89
HNRNPU-226ENST00000640218 ZNF575Q86XF7 245 aa9.47□□□□□ -0.89
HNRNPU-226ENST00000640218 USP24Q9UPU5 2620 aa9.47□□□□□ -0.89
HNRNPU-226ENST00000640218 CNBPP62633 177 aaKnown RBP9.46□□□□□ -0.9
HNRNPU-226ENST00000640218 EPG5Q9HCE0 2579 aa9.45□□□□□ -0.9
HNRNPU-226ENST00000640218 A0A1W2PNM2 257 aa9.45□□□□□ -0.9
HNRNPU-226ENST00000640218 CRIPTQ9P021 101 aa9.45□□□□□ -0.9
HNRNPU-226ENST00000640218 H7BZZ5 65 aa9.42□□□□□ -0.9
HNRNPU-226ENST00000640218 KRTAP1-1Q07627 177 aa9.41□□□□□ -0.9
HNRNPU-226ENST00000640218 BRCA2P51587 3418 aa9.41□□□□□ -0.9
HNRNPU-226ENST00000640218 TNP2Q05952 138 aa9.4□□□□□ -0.91
HNRNPU-226ENST00000640218 Q8N1X5 172 aa9.4□□□□□ -0.91
HNRNPU-226ENST00000640218 Q6ZSA8 131 aa9.39□□□□□ -0.91
HNRNPU-226ENST00000640218 IGLV5-48A0A075B6I7 105 aa9.37□□□□□ -0.91
HNRNPU-226ENST00000640218 A0A0D9SG42 100 aa9.36□□□□□ -0.91
HNRNPU-226ENST00000640218 HECTD1Q9ULT8 2610 aa9.35□□□□□ -0.91
HNRNPU-226ENST00000640218 MGAM2Q2M2H8 2515 aa9.35□□□□□ -0.91
HNRNPU-226ENST00000640218 FAM104AQ969W3 186 aa9.34□□□□□ -0.91
HNRNPU-226ENST00000640218 CR1P17927 2039 aa9.33□□□□□ -0.92
HNRNPU-226ENST00000640218 FLNBO75369 2602 aaKnown RBP9.32□□□□□ -0.92
HNRNPU-226ENST00000640218 IGLV7-46A0A075B6I9 117 aa9.31□□□□□ -0.92
HNRNPU-226ENST00000640218 SPANXA2-OT1Q8N9U9 137 aa9.29□□□□□ -0.92
HNRNPU-226ENST00000640218 LAMA3Q16787 3333 aa9.27□□□□□ -0.93
HNRNPU-226ENST00000640218 Q5VSD8 79 aa9.27□□□□□ -0.93
HNRNPU-226ENST00000640218 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.26□□□□□ -0.93
HNRNPU-226ENST00000640218 C5orf42Q9H799 3197 aa9.25□□□□□ -0.93
HNRNPU-226ENST00000640218 CDC42SE1Q9NRR8 79 aa9.25□□□□□ -0.93
HNRNPU-226ENST00000640218 PRR26Q8N8Z3 221 aa9.24□□□□□ -0.93
HNRNPU-226ENST00000640218 LAMA2P24043 3122 aaKnown RBP9.23□□□□□ -0.93
HNRNPU-226ENST00000640218 CD164Q04900 197 aa9.21□□□□□ -0.93
HNRNPU-226ENST00000640218 USP34Q70CQ2 3546 aa9.21□□□□□ -0.94
HNRNPU-226ENST00000640218 OCR1Q9BZK8 76 aa9.2□□□□□ -0.94
HNRNPU-226ENST00000640218 KTN1-AS1Q86SY8 53 aa9.19□□□□□ -0.94
HNRNPU-226ENST00000640218 FLNAP21333 2647 aaKnown RBP9.19□□□□□ -0.94
HNRNPU-226ENST00000640218 HTTP42858 3142 aa9.17□□□□□ -0.94
HNRNPU-226ENST00000640218 ITPR3Q14573 2671 aa9.16□□□□□ -0.94
HNRNPU-226ENST00000640218 LCA10Q71F78 164 aa9.15□□□□□ -0.94
HNRNPU-226ENST00000640218 HRES1P13985 223 aa9.12□□□□□ -0.95
HNRNPU-226ENST00000640218 ATRQ13535 2644 aa9.09□□□□□ -0.95
HNRNPU-226ENST00000640218 FAM229BQ4G0N7 80 aa9.08□□□□□ -0.96
HNRNPU-226ENST00000640218 PLAC8Q9NZF1 115 aa9.08□□□□□ -0.96
HNRNPU-226ENST00000640218 Q1T7F1 81 aa9.07□□□□□ -0.96
HNRNPU-226ENST00000640218 CAMK2N1Q7Z7J9 78 aa9.07□□□□□ -0.96
HNRNPU-226ENST00000640218 WIPF1O43516 503 aa9.07□□□□□ -0.96
HNRNPU-226ENST00000640218 A0A1B0GU33 70 aa9.07□□□□□ -0.96
HNRNPU-226ENST00000640218 Q8NDZ9 215 aa9.07□□□□□ -0.96
HNRNPU-226ENST00000640218 A0A0C4DFX4 3053 aa9.06□□□□□ -0.96
HNRNPU-226ENST00000640218 MAST4O15021 2626 aa9.05□□□□□ -0.96
HNRNPU-226ENST00000640218 CHD7Q9P2D1 2997 aa9.05□□□□□ -0.96
HNRNPU-226ENST00000640218 XIRP2A4UGR9 3374 aa9.05□□□□□ -0.96
HNRNPU-226ENST00000640218 HELZ2Q9BYK8 2649 aaKnown RBP9.04□□□□□ -0.96
HNRNPU-226ENST00000640218 LCE6AA0A183 80 aa9.04□□□□□ -0.96
HNRNPU-226ENST00000640218 MMP24-AS1A0A0U1RRL7 71 aa9.04□□□□□ -0.96
HNRNPU-226ENST00000640218 ZCCHC13Q8WW36 166 aaKnown RBP9.03□□□□□ -0.96
HNRNPU-226ENST00000640218 Q8N9P0 234 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-226ENST00000640218 CFAP46Q8IYW2 2715 aa9.01□□□□□ -0.97
HNRNPU-226ENST00000640218 SPRR1AP35321 89 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms