RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 ST20-AS1Q8NBB2 130 aa9.64□□□□□ -0.87
SCARB2-208ENST00000638372 CXCL6P80162 114 aa9.63□□□□□ -0.87
SCARB2-208ENST00000638372 RETNLBQ9BQ08 111 aa9.63□□□□□ -0.87
SCARB2-208ENST00000638372 KRTAP1-1Q07627 177 aa9.63□□□□□ -0.87
SCARB2-208ENST00000638372 Q6ZRX8 168 aa9.63□□□□□ -0.87
SCARB2-208ENST00000638372 ITPR1Q14643 2758 aa9.63□□□□□ -0.87
SCARB2-208ENST00000638372 REV3LO60673 3130 aa9.63□□□□□ -0.87
SCARB2-208ENST00000638372 GVQW2A0A096LPI5 108 aaPredicted RBP9.62□□□□□ -0.87
SCARB2-208ENST00000638372 VPREB1P12018 145 aa9.62□□□□□ -0.87
SCARB2-208ENST00000638372 HCG22E2RYF7 251 aa9.62□□□□□ -0.87
SCARB2-208ENST00000638372 SMIM26A0A096LP01 95 aa9.62□□□□□ -0.87
SCARB2-208ENST00000638372 Q6ZQT0 140 aa9.62□□□□□ -0.87
SCARB2-208ENST00000638372 DNAH10OSP0CZ25 163 aa9.61□□□□□ -0.87
SCARB2-208ENST00000638372 NBDYA0A0U1RRE5 68 aa9.61□□□□□ -0.87
SCARB2-208ENST00000638372 FAM168BA1KXE4 195 aa9.61□□□□□ -0.87
SCARB2-208ENST00000638372 SVIPQ8NHG7 77 aa9.6□□□□□ -0.87
SCARB2-208ENST00000638372 TRBV7-6A0A0J9YX20 115 aa9.6□□□□□ -0.87
SCARB2-208ENST00000638372 A6NED7 52 aa9.59□□□□□ -0.87
SCARB2-208ENST00000638372 SMIM29Q86T20 159 aa9.59□□□□□ -0.87
SCARB2-208ENST00000638372 H0Y9P7 68 aa9.59□□□□□ -0.87
SCARB2-208ENST00000638372 K7EIL1 84 aa9.59□□□□□ -0.87
SCARB2-208ENST00000638372 V9GYY9 64 aa9.58□□□□□ -0.88
SCARB2-208ENST00000638372 IGLV6-57P01721 117 aa9.58□□□□□ -0.88
SCARB2-208ENST00000638372 MOBPQ13875 183 aa9.58□□□□□ -0.88
SCARB2-208ENST00000638372 SERP1Q9Y6X1 66 aa9.58□□□□□ -0.88
SCARB2-208ENST00000638372 NSD1Q96L73 2696 aaPredicted RBP9.58□□□□□ -0.88
SCARB2-208ENST00000638372 PRR34Q9NV39 138 aa9.58□□□□□ -0.88
SCARB2-208ENST00000638372 LINC00476Q8WZB0 136 aa9.57□□□□□ -0.88
SCARB2-208ENST00000638372 SERTAD4-AS1Q5TG53 156 aa9.57□□□□□ -0.88
SCARB2-208ENST00000638372 Q8NBF4 154 aa9.57□□□□□ -0.88
SCARB2-208ENST00000638372 C16orf90A8MZG2 172 aa9.57□□□□□ -0.88
SCARB2-208ENST00000638372 LINC00612Q8N6U2 182 aa9.57□□□□□ -0.88
SCARB2-208ENST00000638372 EPM2AB3EWF7 344 aa9.56□□□□□ -0.88
SCARB2-208ENST00000638372 BAHCC1Q9P281 2608 aa9.54□□□□□ -0.88
SCARB2-208ENST00000638372 LOC110117498A0A087WWA1 95 aa9.53□□□□□ -0.88
SCARB2-208ENST00000638372 LRBAP50851 2863 aa9.52□□□□□ -0.88
SCARB2-208ENST00000638372 RTL8CO15255 209 aa9.52□□□□□ -0.89
SCARB2-208ENST00000638372 C15orf56Q8N910 161 aa9.52□□□□□ -0.89
SCARB2-208ENST00000638372 ASH1LQ9NR48 2969 aaKnown RBP9.52□□□□□ -0.89
SCARB2-208ENST00000638372 C1orf64Q8NEQ6 169 aa9.5□□□□□ -0.89
SCARB2-208ENST00000638372 PSPHP1O15172 72 aa9.49□□□□□ -0.89
SCARB2-208ENST00000638372 SPACA4Q8TDM5 124 aa9.49□□□□□ -0.89
SCARB2-208ENST00000638372 PRR15LQ9BU68 103 aa9.49□□□□□ -0.89
SCARB2-208ENST00000638372 CRYGAP11844 174 aa9.49□□□□□ -0.89
SCARB2-208ENST00000638372 LINC00528Q8N1L1 170 aa9.48□□□□□ -0.89
SCARB2-208ENST00000638372 TM2D3Q9BRN9 247 aa9.48□□□□□ -0.89
SCARB2-208ENST00000638372 ITPR2Q14571 2701 aa9.47□□□□□ -0.89
SCARB2-208ENST00000638372 RPL37AP61513 92 aaKnown RBP9.47□□□□□ -0.89
SCARB2-208ENST00000638372 SPINK1P00995 79 aa9.47□□□□□ -0.89
SCARB2-208ENST00000638372 KCNQ1DNQ9H478 68 aa9.47□□□□□ -0.89
SCARB2-208ENST00000638372 IGLV1-50A0A075B6I6 118 aa9.46□□□□□ -0.9
SCARB2-208ENST00000638372 CR1P17927 2039 aa9.45□□□□□ -0.9
SCARB2-208ENST00000638372 hDV103S1A0JD37 113 aa9.45□□□□□ -0.9
SCARB2-208ENST00000638372 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
SCARB2-208ENST00000638372 A0A1B0GW54 56 aa9.44□□□□□ -0.9
SCARB2-208ENST00000638372 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
SCARB2-208ENST00000638372 IGKV2-30P06310 120 aa9.44□□□□□ -0.9
SCARB2-208ENST00000638372 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
SCARB2-208ENST00000638372 BCE1O60756 84 aa9.43□□□□□ -0.9
SCARB2-208ENST00000638372 UTP20O75691 2785 aaKnown RBP9.42□□□□□ -0.9
SCARB2-208ENST00000638372 LIMD2Q9BT23 127 aa9.42□□□□□ -0.9
SCARB2-208ENST00000638372 A0A0G2JQZ4 141 aa9.41□□□□□ -0.9
SCARB2-208ENST00000638372 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
SCARB2-208ENST00000638372 K7ERS5 55 aa9.41□□□□□ -0.9
SCARB2-208ENST00000638372 DMXL1Q9Y485 3027 aa9.41□□□□□ -0.9
SCARB2-208ENST00000638372 TRBV7-4A0A0J9YYF1 115 aa9.4□□□□□ -0.91
SCARB2-208ENST00000638372 FAM104AQ969W3 186 aa9.39□□□□□ -0.91
SCARB2-208ENST00000638372 Q8N377 158 aa9.39□□□□□ -0.91
SCARB2-208ENST00000638372 STAB2Q8WWQ8 2551 aa9.38□□□□□ -0.91
SCARB2-208ENST00000638372 K7EQZ3 153 aa9.38□□□□□ -0.91
SCARB2-208ENST00000638372 WWC2-AS2Q96NR7 200 aa9.37□□□□□ -0.91
SCARB2-208ENST00000638372 ZANQ9Y493 2812 aa9.37□□□□□ -0.91
SCARB2-208ENST00000638372 LOC400499M0QZD8 3231 aa9.37□□□□□ -0.91
SCARB2-208ENST00000638372 SPTBN5Q9NRC6 3674 aaKnown RBP9.35□□□□□ -0.91
SCARB2-208ENST00000638372 IGFL1Q6UW32 110 aa9.34□□□□□ -0.91
SCARB2-208ENST00000638372 C9orf163Q8N9P6 203 aa9.34□□□□□ -0.91
SCARB2-208ENST00000638372 TP53AIP1Q9HCN2 124 aa9.34□□□□□ -0.91
SCARB2-208ENST00000638372 TRAV22A0A0B4J277 110 aa9.34□□□□□ -0.91
SCARB2-208ENST00000638372 PMAIP1Q13794 54 aa9.34□□□□□ -0.91
SCARB2-208ENST00000638372 CELSR2Q9HCU4 2923 aa9.33□□□□□ -0.92
SCARB2-208ENST00000638372 ERC2-IT1O76042 136 aa9.32□□□□□ -0.92
SCARB2-208ENST00000638372 TYMSOSQ8TAI1 123 aa9.32□□□□□ -0.92
SCARB2-208ENST00000638372 C1orf195Q5TG92 126 aa9.32□□□□□ -0.92
SCARB2-208ENST00000638372 TLX1NBP0CAT3 122 aa9.3□□□□□ -0.92
SCARB2-208ENST00000638372 A0A087WTM6 91 aa9.3□□□□□ -0.92
SCARB2-208ENST00000638372 TNRC18O15417 2968 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-208ENST00000638372 ANAPC11Q9NYG5 84 aa9.29□□□□□ -0.92
SCARB2-208ENST00000638372 A8MWP4 228 aa9.28□□□□□ -0.92
SCARB2-208ENST00000638372 LINC00313P59037 77 aa9.28□□□□□ -0.92
SCARB2-208ENST00000638372 MYO15AQ9UKN7 3530 aa9.27□□□□□ -0.92
SCARB2-208ENST00000638372 C4orf26Q17RF5 130 aa9.27□□□□□ -0.93
SCARB2-208ENST00000638372 PLA2G1BP04054 148 aaKnown RBP9.26□□□□□ -0.93
SCARB2-208ENST00000638372 APLNQ9ULZ1 77 aa9.26□□□□□ -0.93
SCARB2-208ENST00000638372 RPS28P62857 69 aaKnown RBP9.25□□□□□ -0.93
SCARB2-208ENST00000638372 SPAG11AQ6PDA7 123 aa9.24□□□□□ -0.93
SCARB2-208ENST00000638372 PLA2G2DQ9UNK4 145 aa9.24□□□□□ -0.93
SCARB2-208ENST00000638372 ZNF861PO60384 105 aa9.24□□□□□ -0.93
SCARB2-208ENST00000638372 C7orf65Q6ZTY9 151 aa9.24□□□□□ -0.93
SCARB2-208ENST00000638372 A0A1W2PNM2 257 aa9.23□□□□□ -0.93
SCARB2-208ENST00000638372 HIVEP1P15822 2718 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms