RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CHCHD10Q8WYQ3 142 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-221ENST00000638141 LIMD2Q9BT23 127 aa8.02□□□□□ -1.13
CAPN3-221ENST00000638141 FAM30AQ9NZY2 134 aa8.02□□□□□ -1.13
CAPN3-221ENST00000638141 ATP11AUNQ6ZP68 121 aa8.02□□□□□ -1.13
CAPN3-221ENST00000638141 LINC00269Q8N2A0 174 aa8.02□□□□□ -1.13
CAPN3-221ENST00000638141 SMR3AQ99954 134 aa8.02□□□□□ -1.13
CAPN3-221ENST00000638141 NIPBLQ6KC79 2804 aaeCLIP8.02□□□□□ -1.13
CAPN3-221ENST00000638141 ANK3Q12955 4377 aaKnown RBP8.01□□□□□ -1.13
CAPN3-221ENST00000638141 M0R378 163 aa8.01□□□□□ -1.13
CAPN3-221ENST00000638141 CUBNO60494 3623 aa8□□□□□ -1.13
CAPN3-221ENST00000638141 CSNK1G2-AS1Q8NCQ2 148 aa8□□□□□ -1.13
CAPN3-221ENST00000638141 C10orf25Q5T742 122 aa7.99□□□□□ -1.13
CAPN3-221ENST00000638141 NSD1Q96L73 2696 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-221ENST00000638141 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-221ENST00000638141 C16orf90A8MZG2 172 aa7.98□□□□□ -1.13
CAPN3-221ENST00000638141 GYPEP15421 78 aa7.98□□□□□ -1.13
CAPN3-221ENST00000638141 LINC00528Q8N1L1 170 aa7.98□□□□□ -1.13
CAPN3-221ENST00000638141 KRTAP1-1Q07627 177 aa7.98□□□□□ -1.13
CAPN3-221ENST00000638141 SPAG11BQ08648 103 aa7.98□□□□□ -1.13
CAPN3-221ENST00000638141 SERTAD4-AS1Q5TG53 156 aa7.98□□□□□ -1.13
CAPN3-221ENST00000638141 C2CD3Q4AC94 2353 aa7.97□□□□□ -1.13
CAPN3-221ENST00000638141 VPREB1P12018 145 aa7.97□□□□□ -1.13
CAPN3-221ENST00000638141 KLK12Q9UKR0 248 aa7.97□□□□□ -1.13
CAPN3-221ENST00000638141 HIVEP2P31629 2446 aa7.97□□□□□ -1.13
CAPN3-221ENST00000638141 IGLV5-48A0A075B6I7 105 aa7.97□□□□□ -1.13
CAPN3-221ENST00000638141 WNK1Q9H4A3 2382 aa7.97□□□□□ -1.13
CAPN3-221ENST00000638141 SPANXA2-OT1Q8N9U9 137 aa7.96□□□□□ -1.13
CAPN3-221ENST00000638141 Q9BRP9 147 aa7.96□□□□□ -1.13
CAPN3-221ENST00000638141 A6NN06 94 aa7.96□□□□□ -1.14
CAPN3-221ENST00000638141 REG3AQ06141 175 aa7.96□□□□□ -1.14
CAPN3-221ENST00000638141 UNQ6190/PRO20217Q6UXQ8 127 aa7.96□□□□□ -1.14
CAPN3-221ENST00000638141 Q8N9P0 234 aaPredicted RBP7.96□□□□□ -1.14
CAPN3-221ENST00000638141 PRO0255Q9UI72 69 aa7.96□□□□□ -1.14
CAPN3-221ENST00000638141 SETD2Q9BYW2 2564 aaPredicted RBP7.96□□□□□ -1.14
CAPN3-221ENST00000638141 CLPSL2Q6UWE3 100 aa7.95□□□□□ -1.14
CAPN3-221ENST00000638141 A8MU10 97 aa7.95□□□□□ -1.14
CAPN3-221ENST00000638141 Q75L30 129 aa7.94□□□□□ -1.14
CAPN3-221ENST00000638141 B9D2Q9BPU9 175 aa7.94□□□□□ -1.14
CAPN3-221ENST00000638141 C3orf84H3BNL1 204 aa7.93□□□□□ -1.14
CAPN3-221ENST00000638141 CHKB-CPT1BH3BT56 60 aa7.93□□□□□ -1.14
CAPN3-221ENST00000638141 FN1P02751 2386 aaKnown RBP7.93□□□□□ -1.14
CAPN3-221ENST00000638141 KCNQ1DNQ9H478 68 aa7.93□□□□□ -1.14
CAPN3-221ENST00000638141 LOC101927531A0A1B0GV80 90 aa7.92□□□□□ -1.14
CAPN3-221ENST00000638141 NF1P21359 2839 aa7.92□□□□□ -1.14
CAPN3-221ENST00000638141 HCG22E2RYF7 251 aa7.92□□□□□ -1.14
CAPN3-221ENST00000638141 H3BS24 57 aa7.91□□□□□ -1.14
CAPN3-221ENST00000638141 ANGP03950 147 aaKnown RBP7.91□□□□□ -1.14
CAPN3-221ENST00000638141 C19orf73Q9NVV2 129 aa7.91□□□□□ -1.14
CAPN3-221ENST00000638141 KPRPQ5T749 579 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-221ENST00000638141 DSCR10P59022 87 aa7.9□□□□□ -1.15
CAPN3-221ENST00000638141 C7orf65Q6ZTY9 151 aa7.9□□□□□ -1.15
CAPN3-221ENST00000638141 ST20-AS1Q8NBB2 130 aa7.9□□□□□ -1.15
CAPN3-221ENST00000638141 INAFM1C9JVW0 142 aa7.89□□□□□ -1.15
CAPN3-221ENST00000638141 H3BPC8 53 aa7.89□□□□□ -1.15
CAPN3-221ENST00000638141 LCA10Q71F78 164 aa7.89□□□□□ -1.15
CAPN3-221ENST00000638141 LINC00208Q96KT6 92 aa7.89□□□□□ -1.15
CAPN3-221ENST00000638141 JMJD1CQ15652 2540 aa7.89□□□□□ -1.15
CAPN3-221ENST00000638141 SPRR4Q96PI1 79 aa7.89□□□□□ -1.15
CAPN3-221ENST00000638141 NOTCH3Q9UM47 2321 aa7.88□□□□□ -1.15
CAPN3-221ENST00000638141 MP68P56378 58 aa7.88□□□□□ -1.15
CAPN3-221ENST00000638141 CDC42SE1Q9NRR8 79 aa7.88□□□□□ -1.15
CAPN3-221ENST00000638141 IGLV10-54A0A075B6I4 117 aa7.88□□□□□ -1.15
CAPN3-221ENST00000638141 DEFB130BP0DP73 79 aa7.88□□□□□ -1.15
CAPN3-221ENST00000638141 DEFB130AP0DP74 79 aa7.88□□□□□ -1.15
CAPN3-221ENST00000638141 C6orf48Q9UBA6 75 aa7.88□□□□□ -1.15
CAPN3-221ENST00000638141 A0A1W2PNM2 257 aa7.87□□□□□ -1.15
CAPN3-221ENST00000638141 APOC4P55056 127 aa7.87□□□□□ -1.15
CAPN3-221ENST00000638141 Q8NBF4 154 aa7.87□□□□□ -1.15
CAPN3-221ENST00000638141 PRR15LQ9BU68 103 aa7.87□□□□□ -1.15
CAPN3-221ENST00000638141 IGLV1-51P01701 117 aa7.86□□□□□ -1.15
CAPN3-221ENST00000638141 PRR34Q9NV39 138 aa7.86□□□□□ -1.15
CAPN3-221ENST00000638141 TNP2Q05952 138 aa7.86□□□□□ -1.15
CAPN3-221ENST00000638141 PRR4Q16378 134 aa7.86□□□□□ -1.15
CAPN3-221ENST00000638141 Q8N377 158 aa7.86□□□□□ -1.15
CAPN3-221ENST00000638141 EGFEM1PQ0D2K5 195 aa7.85□□□□□ -1.15
CAPN3-221ENST00000638141 SPTSSBQ8NFR3 76 aa7.85□□□□□ -1.15
CAPN3-221ENST00000638141 K7EQZ3 153 aa7.84□□□□□ -1.15
CAPN3-221ENST00000638141 XAGE1AQ9HD64 81 aa7.84□□□□□ -1.15
CAPN3-221ENST00000638141 LELP1Q5T871 98 aa7.83□□□□□ -1.16
CAPN3-221ENST00000638141 A6NED7 52 aa7.82□□□□□ -1.16
CAPN3-221ENST00000638141 WFDC10AQ9H1F0 79 aa7.82□□□□□ -1.16
CAPN3-221ENST00000638141 DHRS4-AS1Q9P1J3 65 aa7.81□□□□□ -1.16
CAPN3-221ENST00000638141 ATRQ13535 2644 aa7.81□□□□□ -1.16
CAPN3-221ENST00000638141 C1orf137Q5JT78 98 aa7.81□□□□□ -1.16
CAPN3-221ENST00000638141 A0A096LPF7 62 aa7.79□□□□□ -1.16
CAPN3-221ENST00000638141 C11orf45Q8TAV5 145 aa7.79□□□□□ -1.16
CAPN3-221ENST00000638141 X6R8D5 127 aa7.79□□□□□ -1.16
CAPN3-221ENST00000638141 DNHD1Q96M86 4753 aa7.79□□□□□ -1.16
CAPN3-221ENST00000638141 C8orf87E5RJ46 101 aa7.78□□□□□ -1.16
CAPN3-221ENST00000638141 PLAC8Q9NZF1 115 aa7.78□□□□□ -1.16
CAPN3-221ENST00000638141 FBN1P35555 2871 aaKnown RBP7.78□□□□□ -1.16
CAPN3-221ENST00000638141 C9orf163Q8N9P6 203 aa7.78□□□□□ -1.16
CAPN3-221ENST00000638141 CAMK2N2Q96S95 79 aa7.77□□□□□ -1.17
CAPN3-221ENST00000638141 IGKV2D-24A0A075B6R9 120 aa7.77□□□□□ -1.17
CAPN3-221ENST00000638141 MOBPQ13875 183 aa7.76□□□□□ -1.17
CAPN3-221ENST00000638141 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
CAPN3-221ENST00000638141 KRTAP29-1A8MX34 341 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-221ENST00000638141 DNAJC9-AS1A6NH13 148 aa7.74□□□□□ -1.17
CAPN3-221ENST00000638141 PRR26Q8N8Z3 221 aa7.74□□□□□ -1.17
CAPN3-221ENST00000638141 DEFB105AQ8NG35 78 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms