RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 Q6ZRX8 168 aa10.14□□□□□ -0.79
PNKP-230ENST00000638016 TRAV23DV6A0A075B6W5 121 aa10.13□□□□□ -0.79
PNKP-230ENST00000638016 S100A12P80511 92 aa10.13□□□□□ -0.79
PNKP-230ENST00000638016 MUC17Q685J3 4493 aa10.12□□□□□ -0.79
PNKP-230ENST00000638016 IGLV7-46A0A075B6I9 117 aa10.12□□□□□ -0.79
PNKP-230ENST00000638016 KRTDAPP60985 99 aa10.12□□□□□ -0.79
PNKP-230ENST00000638016 ZNF815PA8K554 130 aa10.11□□□□□ -0.79
PNKP-230ENST00000638016 COA6Q5JTJ3 125 aaKnown RBP10.11□□□□□ -0.79
PNKP-230ENST00000638016 LINC00308Q8TCZ7 52 aa10.11□□□□□ -0.79
PNKP-230ENST00000638016 IGLV9-49A0A0B4J1Y8 123 aa10.1□□□□□ -0.79
PNKP-230ENST00000638016 MOBPQ13875 183 aa10.1□□□□□ -0.79
PNKP-230ENST00000638016 ZNF73O43830 326 aaPredicted RBP10.09□□□□□ -0.79
PNKP-230ENST00000638016 SPAG11AQ6PDA7 123 aa10.08□□□□□ -0.8
PNKP-230ENST00000638016 ST20-AS1Q8NBB2 130 aa10.08□□□□□ -0.8
PNKP-230ENST00000638016 TPRXLQ17RH7 258 aa10.07□□□□□ -0.8
PNKP-230ENST00000638016 ANKRD39Q53RE8 183 aa10.07□□□□□ -0.8
PNKP-230ENST00000638016 ATOH7Q8N100 152 aa10.07□□□□□ -0.8
PNKP-230ENST00000638016 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
PNKP-230ENST00000638016 TIMM17BO60830 172 aa10.06□□□□□ -0.8
PNKP-230ENST00000638016 C4orf48Q5BLP8 95 aa10.06□□□□□ -0.8
PNKP-230ENST00000638016 OR13C6PQ8NH95 151 aa10.06□□□□□ -0.8
PNKP-230ENST00000638016 CTAG1AP78358 180 aa10.05□□□□□ -0.8
PNKP-230ENST00000638016 CDIP1Q9H305 208 aa10.05□□□□□ -0.8
PNKP-230ENST00000638016 JOSD1Q15040 202 aaPredicted RBP10.01□□□□□ -0.81
PNKP-230ENST00000638016 FAT4Q6V0I7 4981 aa10.01□□□□□ -0.81
PNKP-230ENST00000638016 C9orf153Q5TBE3 101 aa10□□□□□ -0.81
PNKP-230ENST00000638016 PCP2Q8IVA1 136 aa10□□□□□ -0.81
PNKP-230ENST00000638016 SPINK1P00995 79 aa9.99□□□□□ -0.81
PNKP-230ENST00000638016 SCGB1D4Q6XE38 83 aa9.99□□□□□ -0.81
PNKP-230ENST00000638016 SPANXDQ9BXN6 97 aa9.99□□□□□ -0.81
PNKP-230ENST00000638016 C20orf202A1L168 122 aa9.98□□□□□ -0.81
PNKP-230ENST00000638016 SSBP3-AS1Q7Z2R9 100 aa9.98□□□□□ -0.81
PNKP-230ENST00000638016 KRTAP13-3Q3SY46 172 aa9.97□□□□□ -0.81
PNKP-230ENST00000638016 C6orf99Q4VX62 202 aa9.97□□□□□ -0.81
PNKP-230ENST00000638016 FP248Q71RG6 208 aaPredicted RBP9.97□□□□□ -0.81
PNKP-230ENST00000638016 Q8N377 158 aa9.97□□□□□ -0.81
PNKP-230ENST00000638016 HINT1P49773 126 aaPredicted RBP9.96□□□□□ -0.82
PNKP-230ENST00000638016 ELOF1P60002 83 aaKnown RBP9.94□□□□□ -0.82
PNKP-230ENST00000638016 COX7BP24311 80 aa9.93□□□□□ -0.82
PNKP-230ENST00000638016 MUSTN1Q8IVN3 82 aa9.93□□□□□ -0.82
PNKP-230ENST00000638016 HIST3H2BBQ8N257 126 aa9.93□□□□□ -0.82
PNKP-230ENST00000638016 CBY1Q9Y3M2 126 aa9.93□□□□□ -0.82
PNKP-230ENST00000638016 LINC00518Q8N0U6 118 aa9.92□□□□□ -0.82
PNKP-230ENST00000638016 SPRR1BP22528 89 aa9.91□□□□□ -0.82
PNKP-230ENST00000638016 RPS29P62273 56 aaKnown RBP9.91□□□□□ -0.82
PNKP-230ENST00000638016 HIST1H2BLQ99880 126 aa9.91□□□□□ -0.82
PNKP-230ENST00000638016 DHRS4-AS1Q9P1J3 65 aa9.91□□□□□ -0.82
PNKP-230ENST00000638016 HRCT1Q6UXD1 115 aa9.9□□□□□ -0.82
PNKP-230ENST00000638016 A6NDN8 102 aa9.89□□□□□ -0.83
PNKP-230ENST00000638016 C5orf52A6NGY3 159 aa9.89□□□□□ -0.83
PNKP-230ENST00000638016 DEFB105AQ8NG35 78 aa9.89□□□□□ -0.83
PNKP-230ENST00000638016 IFITM1P13164 125 aa9.88□□□□□ -0.83
PNKP-230ENST00000638016 Q1RN00 199 aa9.88□□□□□ -0.83
PNKP-230ENST00000638016 SLC25A20O43772 301 aa9.87□□□□□ -0.83
PNKP-230ENST00000638016 A0A0U1RQV1 116 aa9.86□□□□□ -0.83
PNKP-230ENST00000638016 S100A2P29034 98 aa9.85□□□□□ -0.83
PNKP-230ENST00000638016 LINC01547P58512 204 aaPredicted RBP9.84□□□□□ -0.83
PNKP-230ENST00000638016 TAL2Q16559 108 aa9.84□□□□□ -0.83
PNKP-230ENST00000638016 Q6ZVH6 145 aa9.84□□□□□ -0.83
PNKP-230ENST00000638016 KRTAP4-1Q9BYQ7 146 aa9.84□□□□□ -0.83
PNKP-230ENST00000638016 LAMTOR3Q9UHA4 124 aa9.84□□□□□ -0.83
PNKP-230ENST00000638016 A0A0G2JQZ4 141 aa9.83□□□□□ -0.84
PNKP-230ENST00000638016 LCE2AQ5TA79 106 aaPredicted RBP9.83□□□□□ -0.84
PNKP-230ENST00000638016 SMIM11BQ8TCY0 68 aa9.83□□□□□ -0.84
PNKP-230ENST00000638016 COPS9Q8WXC6 57 aa9.83□□□□□ -0.84
PNKP-230ENST00000638016 A0A1B0GWB2 263 aa9.82□□□□□ -0.84
PNKP-230ENST00000638016 SLC25A34Q6PIV7 304 aa9.82□□□□□ -0.84
PNKP-230ENST00000638016 SMIM29Q86T20 159 aa9.82□□□□□ -0.84
PNKP-230ENST00000638016 TRBV7-6A0A0J9YX20 115 aa9.81□□□□□ -0.84
PNKP-230ENST00000638016 S100A1P23297 94 aa9.81□□□□□ -0.84
PNKP-230ENST00000638016 AKR1D1P51857 326 aa9.81□□□□□ -0.84
PNKP-230ENST00000638016 SNRPEP62304 92 aaKnown RBP9.81□□□□□ -0.84
PNKP-230ENST00000638016 TEX49A0A1B0GTD5 131 aa9.8□□□□□ -0.84
PNKP-230ENST00000638016 ASB16-AS1Q495Z4 193 aa9.8□□□□□ -0.84
PNKP-230ENST00000638016 H7C2G1 150 aa9.79□□□□□ -0.84
PNKP-230ENST00000638016 IGLV5-48A0A075B6I7 105 aa9.78□□□□□ -0.84
PNKP-230ENST00000638016 TRAV13-2A0A0B4J235 113 aa9.78□□□□□ -0.84
PNKP-230ENST00000638016 A4D1N5 150 aa9.77□□□□□ -0.85
PNKP-230ENST00000638016 HSBP1L1C9JCN9 74 aa9.77□□□□□ -0.85
PNKP-230ENST00000638016 S100A6P06703 90 aa9.77□□□□□ -0.85
PNKP-230ENST00000638016 XP32Q5T750 250 aa9.77□□□□□ -0.85
PNKP-230ENST00000638016 C12orf57Q99622 126 aa9.75□□□□□ -0.85
PNKP-230ENST00000638016 LIMD2Q9BT23 127 aa9.75□□□□□ -0.85
PNKP-230ENST00000638016 PRO1933Q9H354 126 aa9.75□□□□□ -0.85
PNKP-230ENST00000638016 SCGB1D1O95968 90 aa9.73□□□□□ -0.85
PNKP-230ENST00000638016 C9orf92A6NGG3 77 aa9.72□□□□□ -0.85
PNKP-230ENST00000638016 SEC61BP60468 96 aaKnown RBP9.72□□□□□ -0.85
PNKP-230ENST00000638016 CD164Q04900 197 aa9.7□□□□□ -0.86
PNKP-230ENST00000638016 LINC00575Q6W349 94 aa9.69□□□□□ -0.86
PNKP-230ENST00000638016 NHP2Q9NX24 153 aaKnown RBP9.68□□□□□ -0.86
PNKP-230ENST00000638016 COX8AP10176 69 aa9.67□□□□□ -0.86
PNKP-230ENST00000638016 Q6ZQY7 126 aa9.67□□□□□ -0.86
PNKP-230ENST00000638016 HIST1H4GQ99525 98 aa9.66□□□□□ -0.86
PNKP-230ENST00000638016 VAMP3Q15836 100 aa9.65□□□□□ -0.86
PNKP-230ENST00000638016 C1orf195Q5TG92 126 aa9.65□□□□□ -0.86
PNKP-230ENST00000638016 hADV29S1A0JD25 119 aa9.64□□□□□ -0.87
PNKP-230ENST00000638016 C14orf144Q96I85 54 aa9.64□□□□□ -0.87
PNKP-230ENST00000638016 Q5XG85 94 aa9.63□□□□□ -0.87
PNKP-230ENST00000638016 PCOTHQ58A44 107 aa9.62□□□□□ -0.87
PNKP-230ENST00000638016 KRTAP9-2Q9BYQ4 174 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 619 ms