RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-231	ENST00000637786	UBE2A	P49459	152 aa		13.64	□□□□□ -0.23
CHRNA7-231	ENST00000637786	HSD52	Q0P140	79 aa		13.64	□□□□□ -0.23
CHRNA7-231	ENST00000637786	KRTAP13-1	Q8IUC0	172 aa		13.64	□□□□□ -0.23
CHRNA7-231	ENST00000637786	PRO1933	Q9H354	126 aa		13.64	□□□□□ -0.23
CHRNA7-231	ENST00000637786	ABCA13	Q86UQ4	5058 aa		13.63	□□□□□ -0.23
CHRNA7-231	ENST00000637786		H0Y9J4	135 aa		13.63	□□□□□ -0.23
CHRNA7-231	ENST00000637786	FAM19A1	Q7Z5A9	133 aa		13.63	□□□□□ -0.23
CHRNA7-231	ENST00000637786		A6NDN8	102 aa		13.62	□□□□□ -0.23
CHRNA7-231	ENST00000637786	DIRC1	Q969H9	104 aa		13.62	□□□□□ -0.23
CHRNA7-231	ENST00000637786	ETDC	A0A1B0GVM5	59 aa		13.61	□□□□□ -0.23
CHRNA7-231	ENST00000637786	ZNF73	O43830	326 aa	Predicted RBP	13.61	□□□□□ -0.23
CHRNA7-231	ENST00000637786	FLG2	Q5D862	2391 aa	Predicted RBP	13.6	□□□□□ -0.23
CHRNA7-231	ENST00000637786	TMEM238L	A0A1B0GVL6	79 aa		13.6	□□□□□ -0.23
CHRNA7-231	ENST00000637786		A6NJY4	79 aa		13.6	□□□□□ -0.23
CHRNA7-231	ENST00000637786	PRLH	P81277	87 aa		13.59	□□□□□ -0.23
CHRNA7-231	ENST00000637786	TSTD3	H0UI37	97 aa		13.58	□□□□□ -0.24
CHRNA7-231	ENST00000637786		A0A0B4J2C4	111 aa		13.56	□□□□□ -0.24
CHRNA7-231	ENST00000637786		B5MCH6	92 aa		13.56	□□□□□ -0.24
CHRNA7-231	ENST00000637786	CFC1B	P0CG36	223 aa		13.56	□□□□□ -0.24
CHRNA7-231	ENST00000637786	CFC1	P0CG37	223 aa		13.56	□□□□□ -0.24
CHRNA7-231	ENST00000637786	HINT1	P49773	126 aa	Predicted RBP	13.55	□□□□□ -0.24
CHRNA7-231	ENST00000637786	FXYD2	P54710	66 aa		13.55	□□□□□ -0.24
CHRNA7-231	ENST00000637786		Q6ZRX8	168 aa		13.54	□□□□□ -0.24
CHRNA7-231	ENST00000637786	TRBV7-6	A0A0J9YX20	115 aa		13.53	□□□□□ -0.24
CHRNA7-231	ENST00000637786	PCLO	Q9Y6V0	5065 aa		13.53	□□□□□ -0.24
CHRNA7-231	ENST00000637786	RPL13A	P40429	203 aa	Known RBP	13.52	□□□□□ -0.25
CHRNA7-231	ENST00000637786	C6orf99	Q4VX62	202 aa		13.52	□□□□□ -0.25
CHRNA7-231	ENST00000637786	SMIM11B	Q8TCY0	68 aa		13.52	□□□□□ -0.25
CHRNA7-231	ENST00000637786	RAB37	Q96AX2	223 aa		13.52	□□□□□ -0.25
CHRNA7-231	ENST00000637786	HIGD2A	Q9BW72	106 aa		13.5	□□□□□ -0.25
CHRNA7-231	ENST00000637786	ELOF1	P60002	83 aa	Known RBP	13.48	□□□□□ -0.25
CHRNA7-231	ENST00000637786		A0A1B0GWB2	263 aa		13.47	□□□□□ -0.25
CHRNA7-231	ENST00000637786	OXT	P01178	125 aa		13.47	□□□□□ -0.25
CHRNA7-231	ENST00000637786	COX7B	P24311	80 aa		13.47	□□□□□ -0.25
CHRNA7-231	ENST00000637786	CTAG1A	P78358	180 aa		13.47	□□□□□ -0.25
CHRNA7-231	ENST00000637786	SMCR5	Q8TEV8	140 aa		13.47	□□□□□ -0.25
CHRNA7-231	ENST00000637786		Q9BRP9	147 aa		13.47	□□□□□ -0.25
CHRNA7-231	ENST00000637786	PRO1854	Q9UHT4	67 aa		13.47	□□□□□ -0.25
CHRNA7-231	ENST00000637786	BVES-AS1	Q5T3Y7	98 aa		13.46	□□□□□ -0.25
CHRNA7-231	ENST00000637786	NHP2	Q9NX24	153 aa	Known RBP	13.46	□□□□□ -0.25
CHRNA7-231	ENST00000637786	MYCBP2	O75592	4640 aa		13.46	□□□□□ -0.25
CHRNA7-231	ENST00000637786		M0R143	59 aa		13.45	□□□□□ -0.26
CHRNA7-231	ENST00000637786	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.44	□□□□□ -0.26
CHRNA7-231	ENST00000637786	DHRS4-AS1	Q9P1J3	65 aa		13.44	□□□□□ -0.26
CHRNA7-231	ENST00000637786	KRTAP1-4	P0C5Y4	121 aa		13.43	□□□□□ -0.26
CHRNA7-231	ENST00000637786	VAMP3	Q15836	100 aa		13.43	□□□□□ -0.26
CHRNA7-231	ENST00000637786	LINC01600	Q96MT4	127 aa		13.43	□□□□□ -0.26
CHRNA7-231	ENST00000637786	ZNF706	Q9Y5V0	76 aa	Predicted RBP	13.42	□□□□□ -0.26
CHRNA7-231	ENST00000637786	FAT3	Q8TDW7	4589 aa		13.4	□□□□□ -0.26
CHRNA7-231	ENST00000637786		H7C2G1	150 aa		13.4	□□□□□ -0.26
CHRNA7-231	ENST00000637786	ERC2-IT1	O76042	136 aa		13.39	□□□□□ -0.27
CHRNA7-231	ENST00000637786	LRP1	Q07954	4544 aa	Known RBP	13.39	□□□□□ -0.27
CHRNA7-231	ENST00000637786	SPRR4	Q96PI1	79 aa		13.38	□□□□□ -0.27
CHRNA7-231	ENST00000637786		K7ERJ3	54 aa		13.37	□□□□□ -0.27
CHRNA7-231	ENST00000637786		Q1RN00	199 aa		13.37	□□□□□ -0.27
CHRNA7-231	ENST00000637786	FAM229B	Q4G0N7	80 aa		13.36	□□□□□ -0.27
CHRNA7-231	ENST00000637786	LINC00575	Q6W349	94 aa		13.33	□□□□□ -0.28
CHRNA7-231	ENST00000637786		H0YGX0	51 aa		13.32	□□□□□ -0.28
CHRNA7-231	ENST00000637786	SLC25A20	O43772	301 aa		13.32	□□□□□ -0.28
CHRNA7-231	ENST00000637786	CRYGA	P11844	174 aa		13.31	□□□□□ -0.28
CHRNA7-231	ENST00000637786	LINC00483	Q53H64	154 aa		13.31	□□□□□ -0.28
CHRNA7-231	ENST00000637786	MT1HL1	P0DM35	61 aa		13.3	□□□□□ -0.28
CHRNA7-231	ENST00000637786	KRTAP10-8	P60410	259 aa		13.3	□□□□□ -0.28
CHRNA7-231	ENST00000637786	PRR26	Q8N8Z3	221 aa		13.3	□□□□□ -0.28
CHRNA7-231	ENST00000637786		J3QL48	77 aa		13.29	□□□□□ -0.28
CHRNA7-231	ENST00000637786	TSPAN13	O95857	204 aa		13.29	□□□□□ -0.28
CHRNA7-231	ENST00000637786	ANAPC11	Q9NYG5	84 aa		13.29	□□□□□ -0.28
CHRNA7-231	ENST00000637786	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.29	□□□□□ -0.28
CHRNA7-231	ENST00000637786	TRIAP1	O43715	76 aa		13.28	□□□□□ -0.28
CHRNA7-231	ENST00000637786	GAGE2A	Q6NT46	116 aa		13.28	□□□□□ -0.28
CHRNA7-231	ENST00000637786	ST20-AS1	Q8NBB2	130 aa		13.28	□□□□□ -0.28
CHRNA7-231	ENST00000637786		A0A087X002	238 aa		13.27	□□□□□ -0.29
CHRNA7-231	ENST00000637786	hADV29S1	A0JD25	119 aa		13.27	□□□□□ -0.29
CHRNA7-231	ENST00000637786	PSMB2	P49721	201 aa		13.26	□□□□□ -0.29
CHRNA7-231	ENST00000637786	SPRR1B	P22528	89 aa		13.25	□□□□□ -0.29
CHRNA7-231	ENST00000637786	TNXB	P22105	4242 aa		13.24	□□□□□ -0.29
CHRNA7-231	ENST00000637786	COX6C	P09669	75 aa		13.24	□□□□□ -0.29
CHRNA7-231	ENST00000637786	IGLV5-48	A0A075B6I7	105 aa		13.23	□□□□□ -0.29
CHRNA7-231	ENST00000637786	SNCG	O76070	127 aa		13.23	□□□□□ -0.29
CHRNA7-231	ENST00000637786		A0A1B0GX51	115 aa		13.22	□□□□□ -0.29
CHRNA7-231	ENST00000637786	BATF	Q16520	125 aa		13.22	□□□□□ -0.29
CHRNA7-231	ENST00000637786	KRTAP13-2	Q52LG2	175 aa		13.21	□□□□□ -0.29
CHRNA7-231	ENST00000637786	TEX49	A0A1B0GTD5	131 aa		13.2	□□□□□ -0.3
CHRNA7-231	ENST00000637786	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	13.2	□□□□□ -0.3
CHRNA7-231	ENST00000637786	FAM218A	Q96MZ4	157 aa		13.2	□□□□□ -0.3
CHRNA7-231	ENST00000637786	LINC01547	P58512	204 aa	Predicted RBP	13.19	□□□□□ -0.3
CHRNA7-231	ENST00000637786		Q6ZQY7	126 aa		13.19	□□□□□ -0.3
CHRNA7-231	ENST00000637786	TYMSOS	Q8TAI1	123 aa		13.19	□□□□□ -0.3
CHRNA7-231	ENST00000637786	DEFB105A	Q8NG35	78 aa		13.17	□□□□□ -0.3
CHRNA7-231	ENST00000637786	C3orf22	Q8N5N4	141 aa		13.16	□□□□□ -0.3
CHRNA7-231	ENST00000637786	CLEC2B	Q92478	149 aa		13.15	□□□□□ -0.3
CHRNA7-231	ENST00000637786	SCGB1C2	P0DMR2	95 aa		13.14	□□□□□ -0.31
CHRNA7-231	ENST00000637786	OCIAD2	Q56VL3	154 aa		13.14	□□□□□ -0.31
CHRNA7-231	ENST00000637786	PPDPFL	Q8WWR9	84 aa		13.14	□□□□□ -0.31
CHRNA7-231	ENST00000637786	SNHG12	Q9BXW3	62 aa		13.14	□□□□□ -0.31
CHRNA7-231	ENST00000637786	LAMTOR3	Q9UHA4	124 aa		13.14	□□□□□ -0.31
CHRNA7-231	ENST00000637786		Q8N377	158 aa		13.13	□□□□□ -0.31
CHRNA7-231	ENST00000637786	IGLV9-49	A0A0B4J1Y8	123 aa		13.1	□□□□□ -0.31
CHRNA7-231	ENST00000637786	PCP4L1	A6NKN8	68 aa		13.1	□□□□□ -0.31
CHRNA7-231	ENST00000637786	SSBP3-AS1	Q7Z2R9	100 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms