RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 HECTD1Q9ULT8 2610 aa13.29□□□□□ -0.28
CACNA1A-243ENST00000637616 C15orf56Q8N910 161 aa13.28□□□□□ -0.28
CACNA1A-243ENST00000637616 FAM229BQ4G0N7 80 aa13.28□□□□□ -0.28
CACNA1A-243ENST00000637616 EGFEM1PQ0D2K5 195 aa13.26□□□□□ -0.29
CACNA1A-243ENST00000637616 OTOGQ6ZRI0 2925 aa13.26□□□□□ -0.29
CACNA1A-243ENST00000637616 MPLKIPQ8TAP9 179 aa13.26□□□□□ -0.29
CACNA1A-243ENST00000637616 HIGD2AQ9BW72 106 aa13.25□□□□□ -0.29
CACNA1A-243ENST00000637616 C1orf43Q9BWL3 253 aa13.25□□□□□ -0.29
CACNA1A-243ENST00000637616 KRTAP26-1Q6PEX3 210 aa13.25□□□□□ -0.29
CACNA1A-243ENST00000637616 RETNQ9HD89 108 aa13.25□□□□□ -0.29
CACNA1A-243ENST00000637616 PKIGQ9Y2B9 76 aa13.25□□□□□ -0.29
CACNA1A-243ENST00000637616 NDUFC1O43677 76 aa13.24□□□□□ -0.29
CACNA1A-243ENST00000637616 KPRPQ5T749 579 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-243ENST00000637616 OCR1Q9BZK8 76 aa13.23□□□□□ -0.29
CACNA1A-243ENST00000637616 SERTAD4-AS1Q5TG53 156 aa13.22□□□□□ -0.29
CACNA1A-243ENST00000637616 Q8N377 158 aa13.22□□□□□ -0.29
CACNA1A-243ENST00000637616 F8P00451 2351 aa13.21□□□□□ -0.29
CACNA1A-243ENST00000637616 RPL37AP8A6NKH3 93 aa13.21□□□□□ -0.29
CACNA1A-243ENST00000637616 FAM30AQ9NZY2 134 aa13.21□□□□□ -0.29
CACNA1A-243ENST00000637616 IGKV2D-24A0A075B6R9 120 aa13.21□□□□□ -0.3
CACNA1A-243ENST00000637616 PRYO14603 147 aa13.2□□□□□ -0.3
CACNA1A-243ENST00000637616 PRO0628Q9UI54 55 aa13.2□□□□□ -0.3
CACNA1A-243ENST00000637616 A0A0U1RQV1 116 aa13.18□□□□□ -0.3
CACNA1A-243ENST00000637616 NKAPP1Q8N9T2 125 aa13.18□□□□□ -0.3
CACNA1A-243ENST00000637616 Q6ZTC4 211 aa13.17□□□□□ -0.3
CACNA1A-243ENST00000637616 C7orf33Q8WU49 177 aa13.17□□□□□ -0.3
CACNA1A-243ENST00000637616 SMIM29Q86T20 159 aa13.17□□□□□ -0.3
CACNA1A-243ENST00000637616 MRAPQ8TCY5 172 aa13.17□□□□□ -0.3
CACNA1A-243ENST00000637616 TENM3Q9P273 2699 aa13.17□□□□□ -0.3
CACNA1A-243ENST00000637616 ESRGQ1W209 222 aa13.16□□□□□ -0.3
CACNA1A-243ENST00000637616 FAM168BA1KXE4 195 aa13.15□□□□□ -0.3
CACNA1A-243ENST00000637616 FUSP35637 526 aaKnown RBP eCLIP13.15□□□□□ -0.3
CACNA1A-243ENST00000637616 ST20-AS1Q8NBB2 130 aa13.15□□□□□ -0.3
CACNA1A-243ENST00000637616 BRK1Q8WUW1 75 aa13.15□□□□□ -0.3
CACNA1A-243ENST00000637616 SYCNQ0VAF6 134 aa13.14□□□□□ -0.31
CACNA1A-243ENST00000637616 LRCOL1A6NCL2 159 aa13.14□□□□□ -0.31
CACNA1A-243ENST00000637616 F8WDY8 70 aa13.14□□□□□ -0.31
CACNA1A-243ENST00000637616 A0A1W2PNM2 257 aa13.13□□□□□ -0.31
CACNA1A-243ENST00000637616 BAHCC1Q9P281 2608 aa13.12□□□□□ -0.31
CACNA1A-243ENST00000637616 ERC2-IT1O76042 136 aa13.12□□□□□ -0.31
CACNA1A-243ENST00000637616 INAFM1C9JVW0 142 aa13.11□□□□□ -0.31
CACNA1A-243ENST00000637616 KCNQ1DNQ9H478 68 aa13.11□□□□□ -0.31
CACNA1A-243ENST00000637616 ATP5EP56381 51 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-243ENST00000637616 NSD1Q96L73 2696 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-243ENST00000637616 SEC61GP60059 68 aa13.11□□□□□ -0.31
CACNA1A-243ENST00000637616 Q9BRP9 147 aa13.1□□□□□ -0.31
CACNA1A-243ENST00000637616 A0A0G2JQZ4 141 aa13.09□□□□□ -0.31
CACNA1A-243ENST00000637616 A0A1W2PNN7 141 aa13.09□□□□□ -0.31
CACNA1A-243ENST00000637616 IGLV5-48A0A075B6I7 105 aa13.09□□□□□ -0.31
CACNA1A-243ENST00000637616 ANK2Q01484 3957 aa13.07□□□□□ -0.32
CACNA1A-243ENST00000637616 C1orf137Q5JT78 98 aa13.07□□□□□ -0.32
CACNA1A-243ENST00000637616 OXLD1Q5BKU9 147 aa13.05□□□□□ -0.32
CACNA1A-243ENST00000637616 Q6ZRX8 168 aa13.04□□□□□ -0.32
CACNA1A-243ENST00000637616 CASC10Q5T4H9 136 aa13.03□□□□□ -0.32
CACNA1A-243ENST00000637616 ETDCA0A1B0GVM5 59 aa13.02□□□□□ -0.33
CACNA1A-243ENST00000637616 K7EQZ3 153 aa13.02□□□□□ -0.33
CACNA1A-243ENST00000637616 PRR4Q16378 134 aa13.02□□□□□ -0.33
CACNA1A-243ENST00000637616 DEFB116Q30KQ4 102 aa13.02□□□□□ -0.33
CACNA1A-243ENST00000637616 PRB2P02812 416 aaPredicted RBP13.01□□□□□ -0.33
CACNA1A-243ENST00000637616 FLNBO75369 2602 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-243ENST00000637616 DSCR10P59022 87 aa13□□□□□ -0.33
CACNA1A-243ENST00000637616 KRTAP7-1Q8IUC3 87 aa12.99□□□□□ -0.33
CACNA1A-243ENST00000637616 DHRS4-AS1Q9P1J3 65 aa12.99□□□□□ -0.33
CACNA1A-243ENST00000637616 Q8NBF4 154 aa12.98□□□□□ -0.33
CACNA1A-243ENST00000637616 IGLV1-50A0A075B6I6 118 aa12.97□□□□□ -0.33
CACNA1A-243ENST00000637616 KRTAP4-16G5E9R7 235 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-243ENST00000637616 TNP2Q05952 138 aa12.97□□□□□ -0.33
CACNA1A-243ENST00000637616 LINC01556Q5JQF7 62 aa12.97□□□□□ -0.33
CACNA1A-243ENST00000637616 UBE2BP63146 152 aa12.97□□□□□ -0.33
CACNA1A-243ENST00000637616 DEFB131BA0A096LNP1 70 aa12.96□□□□□ -0.33
CACNA1A-243ENST00000637616 H3BNG1 76 aa12.95□□□□□ -0.34
CACNA1A-243ENST00000637616 MAST4O15021 2626 aa12.95□□□□□ -0.34
CACNA1A-243ENST00000637616 KRTAP10-11P60412 298 aa12.94□□□□□ -0.34
CACNA1A-243ENST00000637616 C1orf64Q8NEQ6 169 aa12.93□□□□□ -0.34
CACNA1A-243ENST00000637616 V9GYY9 64 aa12.92□□□□□ -0.34
CACNA1A-243ENST00000637616 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-243ENST00000637616 hDV103S1A0JD37 113 aa12.91□□□□□ -0.34
CACNA1A-243ENST00000637616 NOTCH1P46531 2555 aa12.9□□□□□ -0.34
CACNA1A-243ENST00000637616 SRRM2Q9UQ35 2752 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-243ENST00000637616 SPRR4Q96PI1 79 aa12.89□□□□□ -0.35
CACNA1A-243ENST00000637616 SPRR1AP35321 89 aa12.89□□□□□ -0.35
CACNA1A-243ENST00000637616 WFDC13Q8IUB5 93 aa12.88□□□□□ -0.35
CACNA1A-243ENST00000637616 LCE6AA0A183 80 aa12.87□□□□□ -0.35
CACNA1A-243ENST00000637616 MRPL55Q7Z7F7 128 aaKnown RBP12.87□□□□□ -0.35
CACNA1A-243ENST00000637616 C11orf45Q8TAV5 145 aa12.87□□□□□ -0.35
CACNA1A-243ENST00000637616 LINC00476Q8WZB0 136 aa12.87□□□□□ -0.35
CACNA1A-243ENST00000637616 FBN1P35555 2871 aaKnown RBP12.87□□□□□ -0.35
CACNA1A-243ENST00000637616 PSCAO43653 123 aa12.86□□□□□ -0.35
CACNA1A-243ENST00000637616 ZCCHC13Q8WW36 166 aaKnown RBP12.85□□□□□ -0.35
CACNA1A-243ENST00000637616 PSPHP1O15172 72 aa12.85□□□□□ -0.35
CACNA1A-243ENST00000637616 TLX1NBP0CAT3 122 aa12.85□□□□□ -0.35
CACNA1A-243ENST00000637616 STAB1Q9NY15 2570 aa12.85□□□□□ -0.35
CACNA1A-243ENST00000637616 HCG22E2RYF7 251 aa12.85□□□□□ -0.35
CACNA1A-243ENST00000637616 CSMD3Q7Z407 3707 aa12.84□□□□□ -0.35
CACNA1A-243ENST00000637616 RPL37AP61513 92 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-243ENST00000637616 PLA2G2DQ9UNK4 145 aa12.83□□□□□ -0.36
CACNA1A-243ENST00000637616 DNAH10OSP0CZ25 163 aa12.82□□□□□ -0.36
CACNA1A-243ENST00000637616 PRLHP81277 87 aa12.82□□□□□ -0.36
CACNA1A-243ENST00000637616 A0A1B0GW54 56 aa12.82□□□□□ -0.36
CACNA1A-243ENST00000637616 C1orf195Q5TG92 126 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms