RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 COPS9Q8WXC6 57 aa9.72□□□□□ -0.85
CACNA1A-229ENST00000636670 LCE2AQ5TA79 106 aaPredicted RBP9.71□□□□□ -0.86
CACNA1A-229ENST00000636670 IGLV6-57P01721 117 aa9.7□□□□□ -0.86
CACNA1A-229ENST00000636670 IFITM1P13164 125 aa9.7□□□□□ -0.86
CACNA1A-229ENST00000636670 KRTAP10-8P60410 259 aa9.7□□□□□ -0.86
CACNA1A-229ENST00000636670 S100A7L2Q5SY68 101 aa9.7□□□□□ -0.86
CACNA1A-229ENST00000636670 KRTAP4-16G5E9R7 235 aaPredicted RBP9.68□□□□□ -0.86
CACNA1A-229ENST00000636670 CBY1Q9Y3M2 126 aa9.68□□□□□ -0.86
CACNA1A-229ENST00000636670 TRAV23DV6A0A075B6W5 121 aa9.67□□□□□ -0.86
CACNA1A-229ENST00000636670 ETDCA0A1B0GVM5 59 aa9.67□□□□□ -0.86
CACNA1A-229ENST00000636670 RPL13AP40429 203 aaKnown RBP9.66□□□□□ -0.86
CACNA1A-229ENST00000636670 JOSD1Q15040 202 aaPredicted RBP9.66□□□□□ -0.86
CACNA1A-229ENST00000636670 LINC00518Q8N0U6 118 aa9.66□□□□□ -0.86
CACNA1A-229ENST00000636670 TMA7Q9Y2S6 64 aaKnown RBP9.66□□□□□ -0.86
CACNA1A-229ENST00000636670 PRR26Q8N8Z3 221 aa9.65□□□□□ -0.86
CACNA1A-229ENST00000636670 COX8AP10176 69 aa9.64□□□□□ -0.87
CACNA1A-229ENST00000636670 HIGD2AQ9BW72 106 aa9.64□□□□□ -0.87
CACNA1A-229ENST00000636670 VAMP8Q9BV40 100 aa9.63□□□□□ -0.87
CACNA1A-229ENST00000636670 B5MCH6 92 aa9.62□□□□□ -0.87
CACNA1A-229ENST00000636670 FAM229BQ4G0N7 80 aa9.62□□□□□ -0.87
CACNA1A-229ENST00000636670 Q6ZRX8 168 aa9.62□□□□□ -0.87
CACNA1A-229ENST00000636670 DLEU1O43261 78 aa9.61□□□□□ -0.87
CACNA1A-229ENST00000636670 ZNF73O43830 326 aaPredicted RBP9.61□□□□□ -0.87
CACNA1A-229ENST00000636670 SPATA45Q537H7 98 aa9.61□□□□□ -0.87
CACNA1A-229ENST00000636670 MUSTN1Q8IVN3 82 aa9.61□□□□□ -0.87
CACNA1A-229ENST00000636670 OR13C6PQ8NH95 151 aa9.61□□□□□ -0.87
CACNA1A-229ENST00000636670 PAM16Q9Y3D7 125 aa9.61□□□□□ -0.87
CACNA1A-229ENST00000636670 ZNF706Q9Y5V0 76 aaPredicted RBP9.61□□□□□ -0.87
CACNA1A-229ENST00000636670 FSIP2Q5CZC0 6907 aa9.61□□□□□ -0.87
CACNA1A-229ENST00000636670 CRYGAP11844 174 aa9.59□□□□□ -0.87
CACNA1A-229ENST00000636670 SMCR5Q8TEV8 140 aa9.59□□□□□ -0.87
CACNA1A-229ENST00000636670 A0A087X002 238 aa9.58□□□□□ -0.88
CACNA1A-229ENST00000636670 SPRR4Q96PI1 79 aa9.58□□□□□ -0.88
CACNA1A-229ENST00000636670 HINT1P49773 126 aaPredicted RBP9.57□□□□□ -0.88
CACNA1A-229ENST00000636670 PYY3Q5JQD4 70 aa9.57□□□□□ -0.88
CACNA1A-229ENST00000636670 Q9BRP9 147 aa9.56□□□□□ -0.88
CACNA1A-229ENST00000636670 TRAV13-2A0A0B4J235 113 aa9.55□□□□□ -0.88
CACNA1A-229ENST00000636670 SLC25A34Q6PIV7 304 aa9.54□□□□□ -0.88
CACNA1A-229ENST00000636670 C14orf144Q96I85 54 aa9.54□□□□□ -0.88
CACNA1A-229ENST00000636670 ANAPC11Q9NYG5 84 aa9.54□□□□□ -0.88
CACNA1A-229ENST00000636670 HIGD1BQ9P298 99 aa9.54□□□□□ -0.88
CACNA1A-229ENST00000636670 CRCT1Q9UGL9 99 aa9.54□□□□□ -0.88
CACNA1A-229ENST00000636670 A6NDN8 102 aa9.53□□□□□ -0.88
CACNA1A-229ENST00000636670 C6orf99Q4VX62 202 aa9.53□□□□□ -0.88
CACNA1A-229ENST00000636670 KRTAP13-2Q52LG2 175 aa9.53□□□□□ -0.88
CACNA1A-229ENST00000636670 TYMSOSQ8TAI1 123 aa9.53□□□□□ -0.88
CACNA1A-229ENST00000636670 HIST1H4GQ99525 98 aa9.53□□□□□ -0.88
CACNA1A-229ENST00000636670 A4D1N5 150 aa9.52□□□□□ -0.89
CACNA1A-229ENST00000636670 ELOF1P60002 83 aaKnown RBP9.52□□□□□ -0.89
CACNA1A-229ENST00000636670 TRBV7-6A0A0J9YX20 115 aa9.51□□□□□ -0.89
CACNA1A-229ENST00000636670 ERC2-IT1O76042 136 aa9.51□□□□□ -0.89
CACNA1A-229ENST00000636670 LINC00483Q53H64 154 aa9.51□□□□□ -0.89
CACNA1A-229ENST00000636670 COX7BP24311 80 aa9.5□□□□□ -0.89
CACNA1A-229ENST00000636670 C2orf91Q6ZV80 131 aa9.5□□□□□ -0.89
CACNA1A-229ENST00000636670 DHRS4-AS1Q9P1J3 65 aa9.5□□□□□ -0.89
CACNA1A-229ENST00000636670 A0A1B0GWB2 263 aa9.48□□□□□ -0.89
CACNA1A-229ENST00000636670 TAL2Q16559 108 aa9.46□□□□□ -0.9
CACNA1A-229ENST00000636670 GAGE2AQ6NT46 116 aa9.46□□□□□ -0.9
CACNA1A-229ENST00000636670 C3orf22Q8N5N4 141 aa9.46□□□□□ -0.9
CACNA1A-229ENST00000636670 SMIM11BQ8TCY0 68 aa9.46□□□□□ -0.9
CACNA1A-229ENST00000636670 LCE2DQ5TA82 110 aaPredicted RBP9.44□□□□□ -0.9
CACNA1A-229ENST00000636670 LINC00304Q8N9R0 145 aa9.44□□□□□ -0.9
CACNA1A-229ENST00000636670 C12orf57Q99622 126 aa9.44□□□□□ -0.9
CACNA1A-229ENST00000636670 NHP2Q9NX24 153 aaKnown RBP9.42□□□□□ -0.9
CACNA1A-229ENST00000636670 A0A0B4J2C4 111 aa9.41□□□□□ -0.9
CACNA1A-229ENST00000636670 TMEM238LA0A1B0GVL6 79 aa9.41□□□□□ -0.9
CACNA1A-229ENST00000636670 A6NJY4 79 aa9.41□□□□□ -0.9
CACNA1A-229ENST00000636670 SPRR1BP22528 89 aa9.41□□□□□ -0.9
CACNA1A-229ENST00000636670 CTAG1AP78358 180 aa9.41□□□□□ -0.9
CACNA1A-229ENST00000636670 CEND1Q8N111 149 aa9.41□□□□□ -0.9
CACNA1A-229ENST00000636670 ST20-AS1Q8NBB2 130 aa9.41□□□□□ -0.9
CACNA1A-229ENST00000636670 CFC1BP0CG36 223 aa9.39□□□□□ -0.91
CACNA1A-229ENST00000636670 CFC1P0CG37 223 aa9.39□□□□□ -0.91
CACNA1A-229ENST00000636670 HSD52Q0P140 79 aa9.39□□□□□ -0.91
CACNA1A-229ENST00000636670 VAMP3Q15836 100 aa9.39□□□□□ -0.91
CACNA1A-229ENST00000636670 RAB37Q96AX2 223 aa9.39□□□□□ -0.91
CACNA1A-229ENST00000636670 UQCR10Q9UDW1 63 aa9.39□□□□□ -0.91
CACNA1A-229ENST00000636670 MOBPQ13875 183 aa9.38□□□□□ -0.91
CACNA1A-229ENST00000636670 IGLV9-49A0A0B4J1Y8 123 aa9.37□□□□□ -0.91
CACNA1A-229ENST00000636670 SMIM6P0DI80 62 aa9.37□□□□□ -0.91
CACNA1A-229ENST00000636670 PRR4Q16378 134 aa9.37□□□□□ -0.91
CACNA1A-229ENST00000636670 SPAG11AQ6PDA7 123 aa9.37□□□□□ -0.91
CACNA1A-229ENST00000636670 Q8NBF4 154 aa9.37□□□□□ -0.91
CACNA1A-229ENST00000636670 SLC25A20O43772 301 aa9.36□□□□□ -0.91
CACNA1A-229ENST00000636670 TSPAN13O95857 204 aa9.36□□□□□ -0.91
CACNA1A-229ENST00000636670 FXYD2P54710 66 aa9.36□□□□□ -0.91
CACNA1A-229ENST00000636670 BVES-AS1Q5T3Y7 98 aa9.36□□□□□ -0.91
CACNA1A-229ENST00000636670 IGLV5-48A0A075B6I7 105 aa9.35□□□□□ -0.91
CACNA1A-229ENST00000636670 SSBP3-AS1Q7Z2R9 100 aa9.35□□□□□ -0.91
CACNA1A-229ENST00000636670 C9orf153Q5TBE3 101 aa9.34□□□□□ -0.91
CACNA1A-229ENST00000636670 LINC00575Q6W349 94 aa9.34□□□□□ -0.91
CACNA1A-229ENST00000636670 TEX49A0A1B0GTD5 131 aa9.33□□□□□ -0.92
CACNA1A-229ENST00000636670 LAMTOR3Q9UHA4 124 aa9.33□□□□□ -0.92
CACNA1A-229ENST00000636670 H7C2G1 150 aa9.32□□□□□ -0.92
CACNA1A-229ENST00000636670 C4orf48Q5BLP8 95 aa9.32□□□□□ -0.92
CACNA1A-229ENST00000636670 LINC01547P58512 204 aaPredicted RBP9.31□□□□□ -0.92
CACNA1A-229ENST00000636670 PRO1854Q9UHT4 67 aa9.31□□□□□ -0.92
CACNA1A-229ENST00000636670 hADV29S1A0JD25 119 aa9.3□□□□□ -0.92
CACNA1A-229ENST00000636670 SPINK1P00995 79 aa9.3□□□□□ -0.92
CACNA1A-229ENST00000636670 Q1RN00 199 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms