RNA–Protein interactions for RNA: ENST00000636168.1

CHRNA1-208, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA1, Length 1,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-208ENST00000636168 LINC01556Q5JQF7 62 aa8.54□□□□□ -1.04
CHRNA1-208ENST00000636168 FAM236DA0A1B0GTK5 79 aa8.53□□□□□ -1.04
CHRNA1-208ENST00000636168 FAM236CP0DP71 79 aa8.53□□□□□ -1.04
CHRNA1-208ENST00000636168 PKD1P98161 4303 aa8.53□□□□□ -1.04
CHRNA1-208ENST00000636168 H7BZZ5 65 aa8.53□□□□□ -1.04
CHRNA1-208ENST00000636168 XCL1P47992 114 aa8.53□□□□□ -1.04
CHRNA1-208ENST00000636168 Q6ZRN7 208 aaPredicted RBP8.53□□□□□ -1.04
CHRNA1-208ENST00000636168 PRO0628Q9UI54 55 aa8.53□□□□□ -1.04
CHRNA1-208ENST00000636168 KLKP1Q107X0 134 aa8.52□□□□□ -1.05
CHRNA1-208ENST00000636168 TMEM243Q9BU79 118 aa8.52□□□□□ -1.05
CHRNA1-208ENST00000636168 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
CHRNA1-208ENST00000636168 PFN2P35080 140 aa8.51□□□□□ -1.05
CHRNA1-208ENST00000636168 C6orf226Q5I0X4 101 aa8.51□□□□□ -1.05
CHRNA1-208ENST00000636168 Q8N3U1 123 aa8.51□□□□□ -1.05
CHRNA1-208ENST00000636168 IGHV3OR16-9A0A0B4J2B5 98 aa8.49□□□□□ -1.05
CHRNA1-208ENST00000636168 TMEM256-PLSCR3K7ERE1 68 aa8.49□□□□□ -1.05
CHRNA1-208ENST00000636168 LINC00158P58513 81 aa8.49□□□□□ -1.05
CHRNA1-208ENST00000636168 FAM19A1Q7Z5A9 133 aa8.49□□□□□ -1.05
CHRNA1-208ENST00000636168 TRBV6-8A0A0A6YYG3 113 aa8.48□□□□□ -1.05
CHRNA1-208ENST00000636168 C20orf197Q8N268 126 aa8.48□□□□□ -1.05
CHRNA1-208ENST00000636168 TRAV23DV6A0A075B6W5 121 aa8.47□□□□□ -1.05
CHRNA1-208ENST00000636168 A0A087WZ39 114 aa8.47□□□□□ -1.05
CHRNA1-208ENST00000636168 SLPIP03973 132 aa8.47□□□□□ -1.05
CHRNA1-208ENST00000636168 Q8N814 137 aa8.47□□□□□ -1.05
CHRNA1-208ENST00000636168 ENHOQ6UWT2 76 aa8.47□□□□□ -1.05
CHRNA1-208ENST00000636168 UBL5Q9BZL1 73 aa8.47□□□□□ -1.05
CHRNA1-208ENST00000636168 SMIM26A0A096LP01 95 aa8.46□□□□□ -1.06
CHRNA1-208ENST00000636168 DNAH11Q96DT5 4516 aa8.46□□□□□ -1.06
CHRNA1-208ENST00000636168 LOC110117498A0A087WWA1 95 aa8.45□□□□□ -1.06
CHRNA1-208ENST00000636168 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
CHRNA1-208ENST00000636168 PSCAO43653 123 aa8.45□□□□□ -1.06
CHRNA1-208ENST00000636168 KRTAP10-2P60368 255 aa8.44□□□□□ -1.06
CHRNA1-208ENST00000636168 KLK12Q9UKR0 248 aa8.44□□□□□ -1.06
CHRNA1-208ENST00000636168 V9GYY9 64 aa8.44□□□□□ -1.06
CHRNA1-208ENST00000636168 A0A087WTM6 91 aa8.43□□□□□ -1.06
CHRNA1-208ENST00000636168 UBE2L6O14933 153 aa8.43□□□□□ -1.06
CHRNA1-208ENST00000636168 NDUFC1O43677 76 aa8.43□□□□□ -1.06
CHRNA1-208ENST00000636168 ATP5EP56381 51 aaPredicted RBP8.43□□□□□ -1.06
CHRNA1-208ENST00000636168 Q6ZQT0 140 aa8.43□□□□□ -1.06
CHRNA1-208ENST00000636168 KIAA1109Q2LD37 5005 aa8.42□□□□□ -1.06
CHRNA1-208ENST00000636168 FP248Q71RG6 208 aaPredicted RBP8.42□□□□□ -1.06
CHRNA1-208ENST00000636168 CXCL6P80162 114 aa8.41□□□□□ -1.06
CHRNA1-208ENST00000636168 TOMM7Q9P0U1 55 aa8.41□□□□□ -1.06
CHRNA1-208ENST00000636168 DYNC1H1Q14204 4646 aaKnown RBP8.41□□□□□ -1.06
CHRNA1-208ENST00000636168 LRCOL1A6NCL2 159 aa8.4□□□□□ -1.07
CHRNA1-208ENST00000636168 ANGP03950 147 aaKnown RBP8.4□□□□□ -1.07
CHRNA1-208ENST00000636168 FUSP35637 526 aaKnown RBP eCLIP8.4□□□□□ -1.07
CHRNA1-208ENST00000636168 Q8IZM0 81 aa8.39□□□□□ -1.07
CHRNA1-208ENST00000636168 PDE6GP18545 87 aa8.38□□□□□ -1.07
CHRNA1-208ENST00000636168 LINC01547P58512 204 aaPredicted RBP8.38□□□□□ -1.07
CHRNA1-208ENST00000636168 RMI2Q96E14 147 aa8.38□□□□□ -1.07
CHRNA1-208ENST00000636168 IGKV2D-24A0A075B6R9 120 aa8.38□□□□□ -1.07
CHRNA1-208ENST00000636168 H3BQ85 93 aa8.38□□□□□ -1.07
CHRNA1-208ENST00000636168 IGLV4-60A0A075B6I1 120 aa8.37□□□□□ -1.07
CHRNA1-208ENST00000636168 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
CHRNA1-208ENST00000636168 COX17Q14061 63 aa8.37□□□□□ -1.07
CHRNA1-208ENST00000636168 LRP1BQ9NZR2 4599 aa8.37□□□□□ -1.07
CHRNA1-208ENST00000636168 DNAH5Q8TE73 4624 aa8.37□□□□□ -1.07
CHRNA1-208ENST00000636168 RBM3P98179 157 aaKnown RBP8.36□□□□□ -1.07
CHRNA1-208ENST00000636168 LINC00575Q6W349 94 aa8.36□□□□□ -1.07
CHRNA1-208ENST00000636168 TRBV7-4A0A0J9YYF1 115 aa8.36□□□□□ -1.07
CHRNA1-208ENST00000636168 CLPSL2Q6UWE3 100 aa8.36□□□□□ -1.07
CHRNA1-208ENST00000636168 Q6ZVQ6 151 aa8.36□□□□□ -1.07
CHRNA1-208ENST00000636168 LINC00269Q8N2A0 174 aa8.36□□□□□ -1.07
CHRNA1-208ENST00000636168 LINC00959A0A1B0GUT2 108 aa8.35□□□□□ -1.07
CHRNA1-208ENST00000636168 A0A1B0GUV1 79 aa8.35□□□□□ -1.07
CHRNA1-208ENST00000636168 PRR34Q9NV39 138 aa8.35□□□□□ -1.07
CHRNA1-208ENST00000636168 HERC2O95714 4834 aa8.34□□□□□ -1.07
CHRNA1-208ENST00000636168 F8WEM9 126 aa8.34□□□□□ -1.07
CHRNA1-208ENST00000636168 TRBV7-6A0A0J9YX20 115 aa8.33□□□□□ -1.08
CHRNA1-208ENST00000636168 REG3AQ06141 175 aa8.33□□□□□ -1.08
CHRNA1-208ENST00000636168 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
CHRNA1-208ENST00000636168 CDK2AP2O75956 126 aa8.32□□□□□ -1.08
CHRNA1-208ENST00000636168 RYR1P21817 5038 aa8.32□□□□□ -1.08
CHRNA1-208ENST00000636168 KIAA0087Q14695 138 aa8.31□□□□□ -1.08
CHRNA1-208ENST00000636168 IGLV10-54A0A075B6I4 117 aa8.3□□□□□ -1.08
CHRNA1-208ENST00000636168 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.3□□□□□ -1.08
CHRNA1-208ENST00000636168 KRTAP10-1P60331 282 aa8.3□□□□□ -1.08
CHRNA1-208ENST00000636168 C6orf99Q4VX62 202 aa8.3□□□□□ -1.08
CHRNA1-208ENST00000636168 SNURFQ9Y675 71 aa8.3□□□□□ -1.08
CHRNA1-208ENST00000636168 KRTAP26-1Q6PEX3 210 aa8.29□□□□□ -1.08
CHRNA1-208ENST00000636168 PRR3P79522 188 aaKnown RBP8.28□□□□□ -1.08
CHRNA1-208ENST00000636168 HSPG2P98160 4391 aa8.28□□□□□ -1.08
CHRNA1-208ENST00000636168 IGKV3OR2-268A0A0C4DH90 116 aa8.28□□□□□ -1.08
CHRNA1-208ENST00000636168 HAMPP81172 84 aa8.28□□□□□ -1.08
CHRNA1-208ENST00000636168 APOBP04114 4563 aaKnown RBP8.27□□□□□ -1.08
CHRNA1-208ENST00000636168 C14orf177Q52M58 125 aa8.26□□□□□ -1.09
CHRNA1-208ENST00000636168 LINC00474Q9P2X8 69 aa8.26□□□□□ -1.09
CHRNA1-208ENST00000636168 IGLV6-57P01721 117 aa8.26□□□□□ -1.09
CHRNA1-208ENST00000636168 Q8NDZ9 215 aa8.26□□□□□ -1.09
CHRNA1-208ENST00000636168 NREPQ16612 68 aa8.25□□□□□ -1.09
CHRNA1-208ENST00000636168 TMEM254Q8TBM7 123 aa8.25□□□□□ -1.09
CHRNA1-208ENST00000636168 LAMTOR3Q9UHA4 124 aa8.24□□□□□ -1.09
CHRNA1-208ENST00000636168 A0A0U1RQV1 116 aa8.23□□□□□ -1.09
CHRNA1-208ENST00000636168 CD164L2Q6UWJ8 174 aa8.23□□□□□ -1.09
CHRNA1-208ENST00000636168 CHCHD10Q8WYQ3 142 aaPredicted RBP8.23□□□□□ -1.09
CHRNA1-208ENST00000636168 KRTAP17-1Q9BYP8 105 aa8.23□□□□□ -1.09
CHRNA1-208ENST00000636168 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.22□□□□□ -1.09
CHRNA1-208ENST00000636168 OCR1Q9BZK8 76 aa8.22□□□□□ -1.09
CHRNA1-208ENST00000636168 FAM30AQ9NZY2 134 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms