RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 FABP9Q0Z7S8 132 aa2.85□□□□□ -1.95
SMARCA2-240ENST00000635392 SS18Q15532 418 aa2.85□□□□□ -1.95
SMARCA2-240ENST00000635392 LINC00269Q8N2A0 174 aa2.85□□□□□ -1.95
SMARCA2-240ENST00000635392 Q8N8P6 123 aa2.85□□□□□ -1.95
SMARCA2-240ENST00000635392 OR10D4PQ8NGN7 298 aa2.85□□□□□ -1.95
SMARCA2-240ENST00000635392 HIGD2AQ9BW72 106 aa2.85□□□□□ -1.95
SMARCA2-240ENST00000635392 SMCO4Q9NRQ5 59 aa2.85□□□□□ -1.95
SMARCA2-240ENST00000635392 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.84□□□□□ -1.95
SMARCA2-240ENST00000635392 A0A1B0GX51 115 aa2.84□□□□□ -1.95
SMARCA2-240ENST00000635392 NPYP01303 97 aa2.84□□□□□ -1.95
SMARCA2-240ENST00000635392 SEC11AP67812 179 aa2.84□□□□□ -1.95
SMARCA2-240ENST00000635392 MRPS36P82909 103 aaKnown RBP2.84□□□□□ -1.95
SMARCA2-240ENST00000635392 PMAIP1Q13794 54 aa2.84□□□□□ -1.95
SMARCA2-240ENST00000635392 ENHOQ6UWT2 76 aa2.84□□□□□ -1.95
SMARCA2-240ENST00000635392 SDIM1Q6ZPB5 146 aa2.84□□□□□ -1.95
SMARCA2-240ENST00000635392 SPATA12Q7Z6I5 190 aa2.84□□□□□ -1.95
SMARCA2-240ENST00000635392 CDC42SE2Q9NRR3 84 aa2.84□□□□□ -1.95
SMARCA2-240ENST00000635392 CYSLTR1Q9Y271 337 aa2.84□□□□□ -1.95
SMARCA2-240ENST00000635392 FAT2Q9NYQ8 4349 aa2.84□□□□□ -1.95
SMARCA2-240ENST00000635392 HECTD4Q9Y4D8 3996 aa2.84□□□□□ -1.96
SMARCA2-240ENST00000635392 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.83□□□□□ -1.96
SMARCA2-240ENST00000635392 IGKV2-29A2NJV5 120 aaPredicted RBP2.83□□□□□ -1.96
SMARCA2-240ENST00000635392 NDUFC2O95298 119 aa2.83□□□□□ -1.96
SMARCA2-240ENST00000635392 APOMO95445 188 aa2.83□□□□□ -1.96
SMARCA2-240ENST00000635392 IGKV4-1P06312 121 aa2.83□□□□□ -1.96
SMARCA2-240ENST00000635392 Q8N814 137 aa2.83□□□□□ -1.96
SMARCA2-240ENST00000635392 TMEM141Q96I45 108 aa2.83□□□□□ -1.96
SMARCA2-240ENST00000635392 LAMTOR3Q9UHA4 124 aa2.83□□□□□ -1.96
SMARCA2-240ENST00000635392 UBE2D4Q9Y2X8 147 aa2.83□□□□□ -1.96
SMARCA2-240ENST00000635392 DNAH11Q96DT5 4516 aa2.83□□□□□ -1.96
SMARCA2-240ENST00000635392 IGHV1-58A0A0C4DH39 117 aa2.82□□□□□ -1.96
SMARCA2-240ENST00000635392 LINC00959A0A1B0GUT2 108 aa2.82□□□□□ -1.96
SMARCA2-240ENST00000635392 J3KT08 172 aa2.82□□□□□ -1.96
SMARCA2-240ENST00000635392 HERVK_113P63121 156 aa2.82□□□□□ -1.96
SMARCA2-240ENST00000635392 PLEKHB2Q96CS7 222 aa2.82□□□□□ -1.96
SMARCA2-240ENST00000635392 SS18L2Q9UHA2 77 aa2.82□□□□□ -1.96
SMARCA2-240ENST00000635392 PKD1P98161 4303 aa2.82□□□□□ -1.96
SMARCA2-240ENST00000635392 IGKV3OR2-268A0A0C4DH90 116 aa2.81□□□□□ -1.96
SMARCA2-240ENST00000635392 LINC01546A6NGU7 62 aa2.81□□□□□ -1.96
SMARCA2-240ENST00000635392 COX7A2LO14548 114 aa2.81□□□□□ -1.96
SMARCA2-240ENST00000635392 CNBPP62633 177 aaKnown RBP2.81□□□□□ -1.96
SMARCA2-240ENST00000635392 FAM229BQ4G0N7 80 aa2.81□□□□□ -1.96
SMARCA2-240ENST00000635392 CLPSL2Q6UWE3 100 aa2.81□□□□□ -1.96
SMARCA2-240ENST00000635392 TOMM6Q96B49 74 aa2.81□□□□□ -1.96
SMARCA2-240ENST00000635392 CHCHD1Q96BP2 118 aaKnown RBP2.81□□□□□ -1.96
SMARCA2-240ENST00000635392 C14orf144Q96I85 54 aa2.81□□□□□ -1.96
SMARCA2-240ENST00000635392 SCGB3A1Q96QR1 104 aa2.81□□□□□ -1.96
SMARCA2-240ENST00000635392 HSPB8Q9UJY1 196 aa2.81□□□□□ -1.96
SMARCA2-240ENST00000635392 DYNC1H1Q14204 4646 aaKnown RBP2.8□□□□□ -1.96
SMARCA2-240ENST00000635392 PKHD1P08F94 4074 aa2.8□□□□□ -1.96
SMARCA2-240ENST00000635392 IGHV3-64A0A075B6Q5 118 aa2.8□□□□□ -1.96
SMARCA2-240ENST00000635392 GVQW2A0A096LPI5 108 aaPredicted RBP2.8□□□□□ -1.96
SMARCA2-240ENST00000635392 TRAV13-1A0A0B4J241 112 aa2.8□□□□□ -1.96
SMARCA2-240ENST00000635392 HBDP02042 147 aa2.8□□□□□ -1.96
SMARCA2-240ENST00000635392 XCL1P47992 114 aa2.8□□□□□ -1.96
SMARCA2-240ENST00000635392 RPL39P62891 51 aaKnown RBP2.8□□□□□ -1.96
SMARCA2-240ENST00000635392 KRTAP26-1Q6PEX3 210 aa2.8□□□□□ -1.96
SMARCA2-240ENST00000635392 DEFB104AQ8WTQ1 72 aa2.8□□□□□ -1.96
SMARCA2-240ENST00000635392 LINC00474Q9P2X8 69 aa2.8□□□□□ -1.96
SMARCA2-240ENST00000635392 BIRC6Q9NR09 4857 aa2.8□□□□□ -1.96
SMARCA2-240ENST00000635392 IGIPA6NJ69 53 aa2.79□□□□□ -1.96
SMARCA2-240ENST00000635392 H3BRM9 83 aa2.79□□□□□ -1.96
SMARCA2-240ENST00000635392 FUSP35637 526 aaKnown RBP eCLIP2.79□□□□□ -1.96
SMARCA2-240ENST00000635392 Q6ZUT4 128 aa2.79□□□□□ -1.96
SMARCA2-240ENST00000635392 BAGE3Q86Y29 109 aa2.79□□□□□ -1.96
SMARCA2-240ENST00000635392 C9orf163Q8N9P6 203 aa2.79□□□□□ -1.96
SMARCA2-240ENST00000635392 C18orf32Q8TCD1 76 aa2.79□□□□□ -1.96
SMARCA2-240ENST00000635392 AMELXQ99217 191 aa2.79□□□□□ -1.96
SMARCA2-240ENST00000635392 UBE2D1P51668 147 aa2.78□□□□□ -1.96
SMARCA2-240ENST00000635392 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
SMARCA2-240ENST00000635392 SFTA2Q6UW10 78 aa2.78□□□□□ -1.96
SMARCA2-240ENST00000635392 DPH3Q96FX2 82 aa2.78□□□□□ -1.96
SMARCA2-240ENST00000635392 EPPK1P58107 5090 aaKnown RBP2.78□□□□□ -1.97
SMARCA2-240ENST00000635392 LRP1BQ9NZR2 4599 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 DNAH5Q8TE73 4624 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 LOC107984640A0A0U1RRK4 108 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 FAM236DA0A1B0GTK5 79 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 C20orf202A1L168 122 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 NDUFA1O15239 70 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 TRGC2P03986 189 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 FAM236CP0DP71 79 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 AKR1D1P51857 326 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 TSPEAR-AS2P59090 65 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 WFDC2Q14508 124 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 C5orf38Q86SI9 138 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 CARD19Q96LW7 228 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 CST9LQ9H4G1 147 aa2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 MRPL35Q9NZE8 188 aaKnown RBP2.77□□□□□ -1.97
SMARCA2-240ENST00000635392 TRAV12-1A0A0B4J245 112 aa2.76□□□□□ -1.97
SMARCA2-240ENST00000635392 TRBV30A0A0K0K1B3 111 aa2.76□□□□□ -1.97
SMARCA2-240ENST00000635392 NDUFA6P56556 154 aa2.76□□□□□ -1.97
SMARCA2-240ENST00000635392 SPAG11BQ08648 103 aa2.76□□□□□ -1.97
SMARCA2-240ENST00000635392 Q6ZSA8 131 aa2.76□□□□□ -1.97
SMARCA2-240ENST00000635392 Q8IZM0 81 aa2.76□□□□□ -1.97
SMARCA2-240ENST00000635392 C20orf166-AS1Q96NR2 134 aa2.76□□□□□ -1.97
SMARCA2-240ENST00000635392 ERG28Q9UKR5 140 aa2.76□□□□□ -1.97
SMARCA2-240ENST00000635392 ZNF73O43830 326 aaPredicted RBP2.75□□□□□ -1.97
SMARCA2-240ENST00000635392 LEPROTL1O95214 131 aa2.75□□□□□ -1.97
SMARCA2-240ENST00000635392 IGLC3P0DOY3 106 aa2.75□□□□□ -1.97
SMARCA2-240ENST00000635392 OCIAD2Q56VL3 154 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms