RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 FAM218AQ96MZ4 157 aa9.32□□□□□ -0.92
LINC00339-208ENST00000634934 LINC00167Q96N53 147 aa9.31□□□□□ -0.92
LINC00339-208ENST00000634934 A0A0U1RRA0 63 aa9.31□□□□□ -0.92
LINC00339-208ENST00000634934 SMIM11BQ8TCY0 68 aa9.31□□□□□ -0.92
LINC00339-208ENST00000634934 PFN2P35080 140 aa9.3□□□□□ -0.92
LINC00339-208ENST00000634934 C16orf90A8MZG2 172 aa9.29□□□□□ -0.92
LINC00339-208ENST00000634934 DNAL4O96015 105 aa9.29□□□□□ -0.92
LINC00339-208ENST00000634934 RPL18AQ02543 176 aaKnown RBP9.29□□□□□ -0.92
LINC00339-208ENST00000634934 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
LINC00339-208ENST00000634934 LOC107984640A0A0U1RRK4 108 aa9.28□□□□□ -0.92
LINC00339-208ENST00000634934 PKIGQ9Y2B9 76 aa9.27□□□□□ -0.93
LINC00339-208ENST00000634934 KIAA1109Q2LD37 5005 aa9.27□□□□□ -0.93
LINC00339-208ENST00000634934 NDUFC2-KCTD14E9PQ53 114 aa9.26□□□□□ -0.93
LINC00339-208ENST00000634934 IGKV2-24A0A0C4DH68 120 aa9.26□□□□□ -0.93
LINC00339-208ENST00000634934 KRTAP10-1P60331 282 aa9.26□□□□□ -0.93
LINC00339-208ENST00000634934 Q6ZRP5 223 aa9.26□□□□□ -0.93
LINC00339-208ENST00000634934 TLX1NBP0CAT3 122 aa9.25□□□□□ -0.93
LINC00339-208ENST00000634934 A0A096LNI7 61 aa9.24□□□□□ -0.93
LINC00339-208ENST00000634934 CHTF8P0CG12 524 aa9.23□□□□□ -0.93
LINC00339-208ENST00000634934 TMEM126AQ9H061 195 aa9.23□□□□□ -0.93
LINC00339-208ENST00000634934 A0A087WYN8 130 aa9.22□□□□□ -0.93
LINC00339-208ENST00000634934 H3BQ85 93 aa9.22□□□□□ -0.93
LINC00339-208ENST00000634934 SMCR5Q8TEV8 140 aa9.22□□□□□ -0.93
LINC00339-208ENST00000634934 DPH3Q96FX2 82 aa9.22□□□□□ -0.93
LINC00339-208ENST00000634934 XAGE1AQ9HD64 81 aa9.22□□□□□ -0.93
LINC00339-208ENST00000634934 JMJD7-PLA2G4BH0Y9G9 81 aa9.21□□□□□ -0.93
LINC00339-208ENST00000634934 KRTAP3-3Q9BYR6 98 aa9.21□□□□□ -0.93
LINC00339-208ENST00000634934 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.93
LINC00339-208ENST00000634934 ORMDL1Q9P0S3 153 aa9.21□□□□□ -0.93
LINC00339-208ENST00000634934 APOBP04114 4563 aaKnown RBP9.21□□□□□ -0.94
LINC00339-208ENST00000634934 PANO1I0J062 215 aa9.21□□□□□ -0.94
LINC00339-208ENST00000634934 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.21□□□□□ -0.94
LINC00339-208ENST00000634934 HIST1H4AP62805 103 aaKnown RBP9.2□□□□□ -0.94
LINC00339-208ENST00000634934 Q6JHZ5 121 aa9.2□□□□□ -0.94
LINC00339-208ENST00000634934 LINC00474Q9P2X8 69 aa9.2□□□□□ -0.94
LINC00339-208ENST00000634934 C9orf129Q5T035 196 aaKnown RBP9.19□□□□□ -0.94
LINC00339-208ENST00000634934 FAM30AQ9NZY2 134 aa9.19□□□□□ -0.94
LINC00339-208ENST00000634934 TMEM256-PLSCR3K7ERE1 68 aa9.18□□□□□ -0.94
LINC00339-208ENST00000634934 SPACA4Q8TDM5 124 aa9.18□□□□□ -0.94
LINC00339-208ENST00000634934 S100A7L2Q5SY68 101 aa9.17□□□□□ -0.94
LINC00339-208ENST00000634934 RYR1P21817 5038 aa9.17□□□□□ -0.94
LINC00339-208ENST00000634934 ATP5EP2Q5VTU8 51 aa9.16□□□□□ -0.94
LINC00339-208ENST00000634934 GAGE2AQ6NT46 116 aa9.16□□□□□ -0.94
LINC00339-208ENST00000634934 OR13C6PQ8NH95 151 aa9.16□□□□□ -0.94
LINC00339-208ENST00000634934 HERC2O95714 4834 aa9.16□□□□□ -0.94
LINC00339-208ENST00000634934 FAM168BA1KXE4 195 aa9.15□□□□□ -0.94
LINC00339-208ENST00000634934 CCDC179H3BU77 68 aa9.15□□□□□ -0.94
LINC00339-208ENST00000634934 Q6ZSA8 131 aa9.15□□□□□ -0.94
LINC00339-208ENST00000634934 HSPG2P98160 4391 aa9.15□□□□□ -0.94
LINC00339-208ENST00000634934 FAM236AA0A1B0GUQ0 79 aa9.15□□□□□ -0.95
LINC00339-208ENST00000634934 FAM236BA0A1B0GV22 79 aa9.15□□□□□ -0.95
LINC00339-208ENST00000634934 CCKP06307 115 aa9.15□□□□□ -0.95
LINC00339-208ENST00000634934 HAMPP81172 84 aa9.15□□□□□ -0.95
LINC00339-208ENST00000634934 FAM19A5Q7Z5A7 132 aaPredicted RBP9.15□□□□□ -0.95
LINC00339-208ENST00000634934 A0A1W2PNN7 141 aa9.14□□□□□ -0.95
LINC00339-208ENST00000634934 B5MCH6 92 aa9.14□□□□□ -0.95
LINC00339-208ENST00000634934 DNAH8Q96JB1 4490 aa9.14□□□□□ -0.95
LINC00339-208ENST00000634934 ATOX1O00244 68 aa9.13□□□□□ -0.95
LINC00339-208ENST00000634934 UQCRQO14949 82 aa9.13□□□□□ -0.95
LINC00339-208ENST00000634934 SERTAD4-AS1Q5TG53 156 aa9.13□□□□□ -0.95
LINC00339-208ENST00000634934 IGLV6-57P01721 117 aa9.12□□□□□ -0.95
LINC00339-208ENST00000634934 SCXQ7RTU7 201 aa9.12□□□□□ -0.95
LINC00339-208ENST00000634934 CIRBP-AS1Q8TBR5 109 aa9.12□□□□□ -0.95
LINC00339-208ENST00000634934 TRBV7-6A0A0J9YX20 115 aa9.11□□□□□ -0.95
LINC00339-208ENST00000634934 TRBV10-3A0A0K0K1G6 114 aa9.11□□□□□ -0.95
LINC00339-208ENST00000634934 C14orf132Q9NPU4 83 aa9.11□□□□□ -0.95
LINC00339-208ENST00000634934 LINC00575Q6W349 94 aa9.1□□□□□ -0.95
LINC00339-208ENST00000634934 C3orf22Q8N5N4 141 aa9.1□□□□□ -0.95
LINC00339-208ENST00000634934 Q8NDZ9 215 aa9.1□□□□□ -0.95
LINC00339-208ENST00000634934 PLAC8Q9NZF1 115 aa9.1□□□□□ -0.95
LINC00339-208ENST00000634934 GHRHP01286 108 aa9.1□□□□□ -0.95
LINC00339-208ENST00000634934 KRTAP7-1Q8IUC3 87 aa9.1□□□□□ -0.95
LINC00339-208ENST00000634934 NKAPP1Q8N9T2 125 aa9.1□□□□□ -0.95
LINC00339-208ENST00000634934 KRTAP17-1Q9BYP8 105 aa9.1□□□□□ -0.95
LINC00339-208ENST00000634934 PLA2G2DQ9UNK4 145 aa9.1□□□□□ -0.95
LINC00339-208ENST00000634934 LOC110117498A0A087WWA1 95 aa9.09□□□□□ -0.95
LINC00339-208ENST00000634934 CDK2AP2O75956 126 aa9.09□□□□□ -0.95
LINC00339-208ENST00000634934 VPREB1P12018 145 aa9.09□□□□□ -0.95
LINC00339-208ENST00000634934 PDE6GP18545 87 aa9.09□□□□□ -0.95
LINC00339-208ENST00000634934 PRR3P79522 188 aaKnown RBP9.09□□□□□ -0.95
LINC00339-208ENST00000634934 LINC00846Q9NV44 126 aa9.09□□□□□ -0.95
LINC00339-208ENST00000634934 NCR3O14931 201 aa9.07□□□□□ -0.96
LINC00339-208ENST00000634934 COX7CP15954 63 aa9.07□□□□□ -0.96
LINC00339-208ENST00000634934 PHF5AQ7RTV0 110 aaKnown RBP9.07□□□□□ -0.96
LINC00339-208ENST00000634934 IGLV5-37A0A075B6J1 123 aa9.06□□□□□ -0.96
LINC00339-208ENST00000634934 BCE1O60756 84 aa9.05□□□□□ -0.96
LINC00339-208ENST00000634934 CRYGAP11844 174 aa9.05□□□□□ -0.96
LINC00339-208ENST00000634934 C6orf99Q4VX62 202 aa9.05□□□□□ -0.96
LINC00339-208ENST00000634934 hADV29S1A0JD25 119 aa9.05□□□□□ -0.96
LINC00339-208ENST00000634934 EPM2AB3EWF7 344 aa9.05□□□□□ -0.96
LINC00339-208ENST00000634934 MRPL55Q7Z7F7 128 aaKnown RBP9.05□□□□□ -0.96
LINC00339-208ENST00000634934 SS18L2Q9UHA2 77 aa9.05□□□□□ -0.96
LINC00339-208ENST00000634934 M0R378 163 aa9.04□□□□□ -0.96
LINC00339-208ENST00000634934 C7orf33Q8WU49 177 aa9.04□□□□□ -0.96
LINC00339-208ENST00000634934 UBE2BP63146 152 aa9.03□□□□□ -0.96
LINC00339-208ENST00000634934 FAT1Q14517 4588 aa9.03□□□□□ -0.96
LINC00339-208ENST00000634934 RPL37AP8A6NKH3 93 aa9.02□□□□□ -0.97
LINC00339-208ENST00000634934 SMR3BP02814 79 aaPredicted RBP9.02□□□□□ -0.97
LINC00339-208ENST00000634934 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.02□□□□□ -0.97
LINC00339-208ENST00000634934 Q6ZQT0 140 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms