RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
LINC00339-207ENST00000634712 IGLV6-57P01721 117 aa9.23□□□□□ -0.93
LINC00339-207ENST00000634712 OR13C6PQ8NH95 151 aa9.23□□□□□ -0.93
LINC00339-207ENST00000634712 SPRR4Q96PI1 79 aa9.23□□□□□ -0.93
LINC00339-207ENST00000634712 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
LINC00339-207ENST00000634712 TRAV23DV6A0A075B6W5 121 aa9.22□□□□□ -0.93
LINC00339-207ENST00000634712 B5MCH6 92 aa9.22□□□□□ -0.93
LINC00339-207ENST00000634712 ANKRD39Q53RE8 183 aa9.22□□□□□ -0.93
LINC00339-207ENST00000634712 HINT1P49773 126 aaPredicted RBP9.21□□□□□ -0.94
LINC00339-207ENST00000634712 SNRPEP62304 92 aaKnown RBP9.21□□□□□ -0.94
LINC00339-207ENST00000634712 HIST1H2BLQ99880 126 aa9.21□□□□□ -0.94
LINC00339-207ENST00000634712 JOSD1Q15040 202 aaPredicted RBP9.2□□□□□ -0.94
LINC00339-207ENST00000634712 PRR4Q16378 134 aa9.2□□□□□ -0.94
LINC00339-207ENST00000634712 LINC00304Q8N9R0 145 aa9.2□□□□□ -0.94
LINC00339-207ENST00000634712 COPS9Q8WXC6 57 aa9.2□□□□□ -0.94
LINC00339-207ENST00000634712 LRP2P98164 4655 aa9.18□□□□□ -0.94
LINC00339-207ENST00000634712 HSBP1L1C9JCN9 74 aa9.18□□□□□ -0.94
LINC00339-207ENST00000634712 ZNF73O43830 326 aaPredicted RBP9.18□□□□□ -0.94
LINC00339-207ENST00000634712 Q6ZRX8 168 aa9.18□□□□□ -0.94
LINC00339-207ENST00000634712 LINC00518Q8N0U6 118 aa9.18□□□□□ -0.94
LINC00339-207ENST00000634712 SPANXDQ9BXN6 97 aa9.18□□□□□ -0.94
LINC00339-207ENST00000634712 PPDPFQ9H3Y8 114 aa9.18□□□□□ -0.94
LINC00339-207ENST00000634712 C3orf22Q8N5N4 141 aa9.17□□□□□ -0.94
LINC00339-207ENST00000634712 GAGE2AQ6NT46 116 aa9.16□□□□□ -0.94
LINC00339-207ENST00000634712 PCP2Q8IVA1 136 aa9.16□□□□□ -0.94
LINC00339-207ENST00000634712 IFITM1P13164 125 aa9.15□□□□□ -0.94
LINC00339-207ENST00000634712 Q6ZVH6 145 aa9.15□□□□□ -0.94
LINC00339-207ENST00000634712 ERC2-IT1O76042 136 aa9.14□□□□□ -0.95
LINC00339-207ENST00000634712 Q9BRP9 147 aa9.14□□□□□ -0.95
LINC00339-207ENST00000634712 C4orf48Q5BLP8 95 aa9.13□□□□□ -0.95
LINC00339-207ENST00000634712 SCGB1D1O95968 90 aa9.12□□□□□ -0.95
LINC00339-207ENST00000634712 CTAG1AP78358 180 aa9.12□□□□□ -0.95
LINC00339-207ENST00000634712 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
LINC00339-207ENST00000634712 SPAG11AQ6PDA7 123 aa9.12□□□□□ -0.95
LINC00339-207ENST00000634712 MUSTN1Q8IVN3 82 aa9.12□□□□□ -0.95
LINC00339-207ENST00000634712 A6NDN8 102 aa9.1□□□□□ -0.95
LINC00339-207ENST00000634712 IGLV9-49A0A0B4J1Y8 123 aa9.09□□□□□ -0.95
LINC00339-207ENST00000634712 C5orf52A6NGY3 159 aa9.09□□□□□ -0.95
LINC00339-207ENST00000634712 DHRS4-AS1Q9P1J3 65 aa9.09□□□□□ -0.95
LINC00339-207ENST00000634712 LPAP08519 4548 aa9.08□□□□□ -0.96
LINC00339-207ENST00000634712 COX7BP24311 80 aa9.08□□□□□ -0.96
LINC00339-207ENST00000634712 Q8NBF4 154 aa9.08□□□□□ -0.96
LINC00339-207ENST00000634712 C6orf99Q4VX62 202 aa9.07□□□□□ -0.96
LINC00339-207ENST00000634712 MOBPQ13875 183 aa9.06□□□□□ -0.96
LINC00339-207ENST00000634712 RETNLBQ9BQ08 111 aa9.06□□□□□ -0.96
LINC00339-207ENST00000634712 TRAV13-2A0A0B4J235 113 aa9.05□□□□□ -0.96
LINC00339-207ENST00000634712 SSBP3-AS1Q7Z2R9 100 aa9.05□□□□□ -0.96
LINC00339-207ENST00000634712 ST20-AS1Q8NBB2 130 aa9.05□□□□□ -0.96
LINC00339-207ENST00000634712 ELOF1P60002 83 aaKnown RBP9.04□□□□□ -0.96
LINC00339-207ENST00000634712 C9orf153Q5TBE3 101 aa9.03□□□□□ -0.96
LINC00339-207ENST00000634712 TRBV7-6A0A0J9YX20 115 aa9.02□□□□□ -0.97
LINC00339-207ENST00000634712 SPINK1P00995 79 aa9.02□□□□□ -0.97
LINC00339-207ENST00000634712 SLC25A34Q6PIV7 304 aa9.02□□□□□ -0.97
LINC00339-207ENST00000634712 A0A1B0GWB2 263 aa9.01□□□□□ -0.97
LINC00339-207ENST00000634712 TAL2Q16559 108 aa9□□□□□ -0.97
LINC00339-207ENST00000634712 IGLV7-46A0A075B6I9 117 aa8.99□□□□□ -0.97
LINC00339-207ENST00000634712 A4D1N5 150 aa8.99□□□□□ -0.97
LINC00339-207ENST00000634712 COX8AP10176 69 aa8.99□□□□□ -0.97
LINC00339-207ENST00000634712 DEFB105AQ8NG35 78 aa8.99□□□□□ -0.97
LINC00339-207ENST00000634712 HIST1H4GQ99525 98 aa8.99□□□□□ -0.97
LINC00339-207ENST00000634712 LAMTOR3Q9UHA4 124 aa8.99□□□□□ -0.97
LINC00339-207ENST00000634712 SMIM11BQ8TCY0 68 aa8.98□□□□□ -0.97
LINC00339-207ENST00000634712 SPRR1BP22528 89 aa8.97□□□□□ -0.97
LINC00339-207ENST00000634712 VAMP3Q15836 100 aa8.97□□□□□ -0.97
LINC00339-207ENST00000634712 RNF213Q63HN8 5207 aa8.96□□□□□ -0.97
LINC00339-207ENST00000634712 NHP2Q9NX24 153 aaKnown RBP8.96□□□□□ -0.98
LINC00339-207ENST00000634712 TEX49A0A1B0GTD5 131 aa8.95□□□□□ -0.98
LINC00339-207ENST00000634712 DLEU1O43261 78 aa8.95□□□□□ -0.98
LINC00339-207ENST00000634712 SPATA45Q537H7 98 aa8.95□□□□□ -0.98
LINC00339-207ENST00000634712 PAM16Q9Y3D7 125 aa8.95□□□□□ -0.98
LINC00339-207ENST00000634712 SLC25A20O43772 301 aa8.94□□□□□ -0.98
LINC00339-207ENST00000634712 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
LINC00339-207ENST00000634712 FP248Q71RG6 208 aaPredicted RBP8.94□□□□□ -0.98
LINC00339-207ENST00000634712 C14orf144Q96I85 54 aa8.94□□□□□ -0.98
LINC00339-207ENST00000634712 VAMP8Q9BV40 100 aa8.94□□□□□ -0.98
LINC00339-207ENST00000634712 CDIP1Q9H305 208 aa8.94□□□□□ -0.98
LINC00339-207ENST00000634712 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
LINC00339-207ENST00000634712 Q1RN00 199 aa8.92□□□□□ -0.98
LINC00339-207ENST00000634712 C12orf57Q99622 126 aa8.91□□□□□ -0.98
LINC00339-207ENST00000634712 Q8N377 158 aa8.89□□□□□ -0.99
LINC00339-207ENST00000634712 HRCT1Q6UXD1 115 aa8.88□□□□□ -0.99
LINC00339-207ENST00000634712 HIGD1BQ9P298 99 aa8.88□□□□□ -0.99
LINC00339-207ENST00000634712 IGLV5-48A0A075B6I7 105 aa8.87□□□□□ -0.99
LINC00339-207ENST00000634712 PRO1933Q9H354 126 aa8.87□□□□□ -0.99
LINC00339-207ENST00000634712 hADV29S1A0JD25 119 aa8.86□□□□□ -0.99
LINC00339-207ENST00000634712 LINC00575Q6W349 94 aa8.86□□□□□ -0.99
LINC00339-207ENST00000634712 RAB37Q96AX2 223 aa8.86□□□□□ -0.99
LINC00339-207ENST00000634712 LINC01547P58512 204 aaPredicted RBP8.86□□□□□ -0.99
LINC00339-207ENST00000634712 BVES-AS1Q5T3Y7 98 aa8.86□□□□□ -0.99
LINC00339-207ENST00000634712 LIMD2Q9BT23 127 aa8.86□□□□□ -0.99
LINC00339-207ENST00000634712 H7C2G1 150 aa8.85□□□□□ -0.99
LINC00339-207ENST00000634712 SMIM29Q86T20 159 aa8.85□□□□□ -0.99
LINC00339-207ENST00000634712 TMA7Q9Y2S6 64 aaKnown RBP8.85□□□□□ -0.99
LINC00339-207ENST00000634712 CFC1BP0CG36 223 aa8.83□□□□□ -1
LINC00339-207ENST00000634712 CFC1P0CG37 223 aa8.83□□□□□ -1
LINC00339-207ENST00000634712 F8WEM9 126 aa8.82□□□□□ -1
LINC00339-207ENST00000634712 CD164Q04900 197 aa8.82□□□□□ -1
LINC00339-207ENST00000634712 Q6ZQY7 126 aa8.82□□□□□ -1
LINC00339-207ENST00000634712 C2orf91Q6ZV80 131 aa8.82□□□□□ -1
LINC00339-207ENST00000634712 CEND1Q8N111 149 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms