RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 PMCHL2Q9BQD1 86 aa6.89□□□□□ -1.31
LINC00339-206ENST00000634451 MAP1LC3CQ9BXW4 147 aa6.89□□□□□ -1.31
LINC00339-206ENST00000634451 H7C2G1 150 aa6.88□□□□□ -1.31
LINC00339-206ENST00000634451 LEPROTO15243 131 aa6.88□□□□□ -1.31
LINC00339-206ENST00000634451 ZNF73O43830 326 aaPredicted RBP6.88□□□□□ -1.31
LINC00339-206ENST00000634451 ADAMTSL4-AS1Q5T5F5 129 aa6.88□□□□□ -1.31
LINC00339-206ENST00000634451 A0A0G2JQZ4 141 aa6.87□□□□□ -1.31
LINC00339-206ENST00000634451 M0R2T5 61 aa6.87□□□□□ -1.31
LINC00339-206ENST00000634451 LINC00587B1AMM8 73 aa6.86□□□□□ -1.31
LINC00339-206ENST00000634451 J3QQQ9 107 aa6.86□□□□□ -1.31
LINC00339-206ENST00000634451 LINC00310P59036 64 aa6.86□□□□□ -1.31
LINC00339-206ENST00000634451 CHCHD1Q96BP2 118 aaKnown RBP6.86□□□□□ -1.31
LINC00339-206ENST00000634451 YPEL4Q96NS1 127 aa6.85□□□□□ -1.31
LINC00339-206ENST00000634451 NDUFC2O95298 119 aa6.84□□□□□ -1.31
LINC00339-206ENST00000634451 SPRR1BP22528 89 aa6.84□□□□□ -1.31
LINC00339-206ENST00000634451 JOSD1Q15040 202 aaPredicted RBP6.84□□□□□ -1.31
LINC00339-206ENST00000634451 MIEN1Q9BRT3 115 aa6.84□□□□□ -1.31
LINC00339-206ENST00000634451 Q1RN00 199 aa6.83□□□□□ -1.32
LINC00339-206ENST00000634451 LIMD2Q9BT23 127 aa6.83□□□□□ -1.32
LINC00339-206ENST00000634451 HSBP1O75506 76 aa6.82□□□□□ -1.32
LINC00339-206ENST00000634451 APOC3P02656 99 aa6.82□□□□□ -1.32
LINC00339-206ENST00000634451 COX6B2Q6YFQ2 88 aa6.82□□□□□ -1.32
LINC00339-206ENST00000634451 A0A0J9YXY3 114 aa6.81□□□□□ -1.32
LINC00339-206ENST00000634451 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.81□□□□□ -1.32
LINC00339-206ENST00000634451 LGALS3P17931 250 aaKnown RBP6.81□□□□□ -1.32
LINC00339-206ENST00000634451 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
LINC00339-206ENST00000634451 SSPOA2VEC9 5147 aa6.81□□□□□ -1.32
LINC00339-206ENST00000634451 C1orf195Q5TG92 126 aa6.8□□□□□ -1.32
LINC00339-206ENST00000634451 DEFB105AQ8NG35 78 aa6.8□□□□□ -1.32
LINC00339-206ENST00000634451 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
LINC00339-206ENST00000634451 SERF1AO75920 110 aa6.79□□□□□ -1.32
LINC00339-206ENST00000634451 LITAFQ99732 161 aa6.79□□□□□ -1.32
LINC00339-206ENST00000634451 USH2AO75445 5202 aa6.78□□□□□ -1.32
LINC00339-206ENST00000634451 DPM2O94777 84 aa6.78□□□□□ -1.32
LINC00339-206ENST00000634451 LEPROTL1O95214 131 aa6.78□□□□□ -1.32
LINC00339-206ENST00000634451 FABP4P15090 132 aa6.78□□□□□ -1.32
LINC00339-206ENST00000634451 OR13C6PQ8NH95 151 aa6.78□□□□□ -1.32
LINC00339-206ENST00000634451 LAMTOR3Q9UHA4 124 aa6.78□□□□□ -1.32
LINC00339-206ENST00000634451 PLNP26678 52 aa6.77□□□□□ -1.33
LINC00339-206ENST00000634451 NMUP48645 174 aa6.77□□□□□ -1.33
LINC00339-206ENST00000634451 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
LINC00339-206ENST00000634451 C5orf52A6NGY3 159 aa6.76□□□□□ -1.33
LINC00339-206ENST00000634451 IGKCP01834 107 aa6.76□□□□□ -1.33
LINC00339-206ENST00000634451 HERVK_113P61574 105 aa6.76□□□□□ -1.33
LINC00339-206ENST00000634451 LINC00308Q8TCZ7 52 aa6.76□□□□□ -1.33
LINC00339-206ENST00000634451 C6orf99Q4VX62 202 aa6.75□□□□□ -1.33
LINC00339-206ENST00000634451 DHRS4-AS1Q9P1J3 65 aa6.75□□□□□ -1.33
LINC00339-206ENST00000634451 TRGC2P03986 189 aa6.74□□□□□ -1.33
LINC00339-206ENST00000634451 COX7BP24311 80 aa6.74□□□□□ -1.33
LINC00339-206ENST00000634451 HINT1P49773 126 aaPredicted RBP6.74□□□□□ -1.33
LINC00339-206ENST00000634451 ELOF1P60002 83 aaKnown RBP6.74□□□□□ -1.33
LINC00339-206ENST00000634451 TTTY13Q9BZ97 58 aa6.74□□□□□ -1.33
LINC00339-206ENST00000634451 PRO1933Q9H354 126 aa6.74□□□□□ -1.33
LINC00339-206ENST00000634451 SNAPINO95295 136 aa6.73□□□□□ -1.33
LINC00339-206ENST00000634451 CD164Q04900 197 aa6.73□□□□□ -1.33
LINC00339-206ENST00000634451 TAL2Q16559 108 aa6.73□□□□□ -1.33
LINC00339-206ENST00000634451 SLC25A34Q6PIV7 304 aa6.73□□□□□ -1.33
LINC00339-206ENST00000634451 SPANXCQ9NY87 97 aa6.73□□□□□ -1.33
LINC00339-206ENST00000634451 E9PLD3 99 aa6.72□□□□□ -1.33
LINC00339-206ENST00000634451 Q5XG85 94 aa6.72□□□□□ -1.33
LINC00339-206ENST00000634451 SVBPQ8N300 66 aa6.72□□□□□ -1.33
LINC00339-206ENST00000634451 Q6Q795 121 aa6.71□□□□□ -1.34
LINC00339-206ENST00000634451 TEX49A0A1B0GTD5 131 aa6.7□□□□□ -1.34
LINC00339-206ENST00000634451 SPANXDQ9BXN6 97 aa6.7□□□□□ -1.34
LINC00339-206ENST00000634451 LOC100996750A0A140TA64 210 aa6.69□□□□□ -1.34
LINC00339-206ENST00000634451 AKR1D1P51857 326 aa6.69□□□□□ -1.34
LINC00339-206ENST00000634451 KRTAP4-6Q9BYQ5 205 aa6.69□□□□□ -1.34
LINC00339-206ENST00000634451 HSPB8Q9UJY1 196 aa6.69□□□□□ -1.34
LINC00339-206ENST00000634451 KRTAP9-8Q9BYQ0 159 aa6.68□□□□□ -1.34
LINC00339-206ENST00000634451 IGLV5-48A0A075B6I7 105 aa6.67□□□□□ -1.34
LINC00339-206ENST00000634451 NDUFA5Q16718 116 aa6.67□□□□□ -1.34
LINC00339-206ENST00000634451 FCGBPQ9Y6R7 5405 aaPredicted RBP6.66□□□□□ -1.34
LINC00339-206ENST00000634451 ZNF815PA8K554 130 aa6.65□□□□□ -1.34
LINC00339-206ENST00000634451 TIMM17BO60830 172 aa6.65□□□□□ -1.34
LINC00339-206ENST00000634451 CBY1Q9Y3M2 126 aa6.65□□□□□ -1.34
LINC00339-206ENST00000634451 LINC00518Q8N0U6 118 aa6.64□□□□□ -1.35
LINC00339-206ENST00000634451 SYS1-DBNDD2H3BUS1 97 aa6.62□□□□□ -1.35
LINC00339-206ENST00000634451 OBSCN-AS1Q96MR7 158 aa6.62□□□□□ -1.35
LINC00339-206ENST00000634451 PCP2Q8IVA1 136 aa6.61□□□□□ -1.35
LINC00339-206ENST00000634451 A0A1B0GWB2 263 aa6.6□□□□□ -1.35
LINC00339-206ENST00000634451 TRBV7-6A0A0J9YX20 115 aa6.59□□□□□ -1.35
LINC00339-206ENST00000634451 A6NDN8 102 aa6.59□□□□□ -1.35
LINC00339-206ENST00000634451 TCL1BO95988 128 aa6.58□□□□□ -1.36
LINC00339-206ENST00000634451 LINC01545Q5VT33 79 aa6.58□□□□□ -1.36
LINC00339-206ENST00000634451 COLCA2A8K830 154 aa6.57□□□□□ -1.36
LINC00339-206ENST00000634451 MT2AP02795 61 aa6.57□□□□□ -1.36
LINC00339-206ENST00000634451 Q75L30 129 aa6.57□□□□□ -1.36
LINC00339-206ENST00000634451 ATP11AUNQ6ZP68 121 aa6.56□□□□□ -1.36
LINC00339-206ENST00000634451 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
LINC00339-206ENST00000634451 SMIM11BQ8TCY0 68 aa6.56□□□□□ -1.36
LINC00339-206ENST00000634451 TRBV7-7A0A0K0K1E9 115 aa6.55□□□□□ -1.36
LINC00339-206ENST00000634451 SMCPP49901 116 aaPredicted RBP6.55□□□□□ -1.36
LINC00339-206ENST00000634451 ANKRD39Q53RE8 183 aa6.55□□□□□ -1.36
LINC00339-206ENST00000634451 IGFL1Q6UW32 110 aa6.55□□□□□ -1.36
LINC00339-206ENST00000634451 MUSTN1Q8IVN3 82 aa6.55□□□□□ -1.36
LINC00339-206ENST00000634451 MT1FP04733 61 aa6.54□□□□□ -1.36
LINC00339-206ENST00000634451 CFC1P0CG37 223 aa6.54□□□□□ -1.36
LINC00339-206ENST00000634451 SCGB1D4Q6XE38 83 aa6.53□□□□□ -1.36
LINC00339-206ENST00000634451 HIST1H2BKO60814 126 aa6.52□□□□□ -1.37
LINC00339-206ENST00000634451 HIST1H2BJP06899 126 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms