RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 SPRR4Q96PI1 79 aa12.13□□□□□ -0.47
CIRBP-246ENST00000628979 SPANXCQ9NY87 97 aa12.13□□□□□ -0.47
CIRBP-246ENST00000628979 ZNF706Q9Y5V0 76 aaPredicted RBP12.12□□□□□ -0.47
CIRBP-246ENST00000628979 SNRPEP62304 92 aaKnown RBP12.11□□□□□ -0.47
CIRBP-246ENST00000628979 PCP2Q8IVA1 136 aa12.11□□□□□ -0.47
CIRBP-246ENST00000628979 C3orf22Q8N5N4 141 aa12.1□□□□□ -0.47
CIRBP-246ENST00000628979 PPDPFQ9H3Y8 114 aa12.1□□□□□ -0.47
CIRBP-246ENST00000628979 UBR4Q5T4S7 5183 aa12.08□□□□□ -0.48
CIRBP-246ENST00000628979 SPANXDQ9BXN6 97 aa12.08□□□□□ -0.48
CIRBP-246ENST00000628979 ZNF73O43830 326 aaPredicted RBP12.07□□□□□ -0.48
CIRBP-246ENST00000628979 ERC2-IT1O76042 136 aa12.07□□□□□ -0.48
CIRBP-246ENST00000628979 PRR4Q16378 134 aa12.07□□□□□ -0.48
CIRBP-246ENST00000628979 Q6ZRX8 168 aa12.07□□□□□ -0.48
CIRBP-246ENST00000628979 LINC00304Q8N9R0 145 aa12.07□□□□□ -0.48
CIRBP-246ENST00000628979 Q9BRP9 147 aa12.06□□□□□ -0.48
CIRBP-246ENST00000628979 HSBP1L1C9JCN9 74 aa12.05□□□□□ -0.48
CIRBP-246ENST00000628979 GAGE2AQ6NT46 116 aa12.05□□□□□ -0.48
CIRBP-246ENST00000628979 CBY1Q9Y3M2 126 aa12.05□□□□□ -0.48
CIRBP-246ENST00000628979 LINC00518Q8N0U6 118 aa12.04□□□□□ -0.48
CIRBP-246ENST00000628979 SCGB1D1O95968 90 aa12.03□□□□□ -0.48
CIRBP-246ENST00000628979 HINT1P49773 126 aaPredicted RBP12.03□□□□□ -0.48
CIRBP-246ENST00000628979 JOSD1Q15040 202 aaPredicted RBP12.03□□□□□ -0.48
CIRBP-246ENST00000628979 COPS9Q8WXC6 57 aa12.03□□□□□ -0.48
CIRBP-246ENST00000628979 LRP2P98164 4655 aa12.03□□□□□ -0.48
CIRBP-246ENST00000628979 MUSTN1Q8IVN3 82 aa12.02□□□□□ -0.49
CIRBP-246ENST00000628979 IFITM1P13164 125 aa12.01□□□□□ -0.49
CIRBP-246ENST00000628979 C5orf52A6NGY3 159 aa12□□□□□ -0.49
CIRBP-246ENST00000628979 Q6ZVH6 145 aa11.99□□□□□ -0.49
CIRBP-246ENST00000628979 LINC00483Q53H64 154 aa11.98□□□□□ -0.49
CIRBP-246ENST00000628979 LPAP08519 4548 aa11.96□□□□□ -0.49
CIRBP-246ENST00000628979 IGLV9-49A0A0B4J1Y8 123 aa11.96□□□□□ -0.49
CIRBP-246ENST00000628979 A6NDN8 102 aa11.96□□□□□ -0.49
CIRBP-246ENST00000628979 RETNLBQ9BQ08 111 aa11.96□□□□□ -0.49
CIRBP-246ENST00000628979 C4orf48Q5BLP8 95 aa11.95□□□□□ -0.5
CIRBP-246ENST00000628979 ST20-AS1Q8NBB2 130 aa11.95□□□□□ -0.5
CIRBP-246ENST00000628979 Q8NBF4 154 aa11.95□□□□□ -0.5
CIRBP-246ENST00000628979 C6orf99Q4VX62 202 aa11.94□□□□□ -0.5
CIRBP-246ENST00000628979 COX7BP24311 80 aa11.93□□□□□ -0.5
CIRBP-246ENST00000628979 MOBPQ13875 183 aa11.92□□□□□ -0.5
CIRBP-246ENST00000628979 SPAG11AQ6PDA7 123 aa11.91□□□□□ -0.5
CIRBP-246ENST00000628979 DHRS4-AS1Q9P1J3 65 aa11.91□□□□□ -0.5
CIRBP-246ENST00000628979 ELOF1P60002 83 aaKnown RBP11.89□□□□□ -0.51
CIRBP-246ENST00000628979 TRAV13-2A0A0B4J235 113 aa11.87□□□□□ -0.51
CIRBP-246ENST00000628979 C9orf153Q5TBE3 101 aa11.87□□□□□ -0.51
CIRBP-246ENST00000628979 CTAG1AP78358 180 aa11.86□□□□□ -0.51
CIRBP-246ENST00000628979 SSBP3-AS1Q7Z2R9 100 aa11.85□□□□□ -0.51
CIRBP-246ENST00000628979 TRBV7-6A0A0J9YX20 115 aa11.84□□□□□ -0.51
CIRBP-246ENST00000628979 A4D1N5 150 aa11.84□□□□□ -0.51
CIRBP-246ENST00000628979 COX8AP10176 69 aa11.84□□□□□ -0.51
CIRBP-246ENST00000628979 DEFB105AQ8NG35 78 aa11.84□□□□□ -0.51
CIRBP-246ENST00000628979 A0A1B0GWB2 263 aa11.83□□□□□ -0.52
CIRBP-246ENST00000628979 SMIM11BQ8TCY0 68 aa11.83□□□□□ -0.52
CIRBP-246ENST00000628979 HIST1H4GQ99525 98 aa11.83□□□□□ -0.52
CIRBP-246ENST00000628979 PAM16Q9Y3D7 125 aa11.83□□□□□ -0.52
CIRBP-246ENST00000628979 TAL2Q16559 108 aa11.82□□□□□ -0.52
CIRBP-246ENST00000628979 C14orf144Q96I85 54 aa11.82□□□□□ -0.52
CIRBP-246ENST00000628979 SPINK1P00995 79 aa11.81□□□□□ -0.52
CIRBP-246ENST00000628979 SPATA45Q537H7 98 aa11.81□□□□□ -0.52
CIRBP-246ENST00000628979 IGLV7-46A0A075B6I9 117 aa11.8□□□□□ -0.52
CIRBP-246ENST00000628979 SPRR1BP22528 89 aa11.79□□□□□ -0.52
CIRBP-246ENST00000628979 SLC25A34Q6PIV7 304 aa11.79□□□□□ -0.52
CIRBP-246ENST00000628979 C12orf57Q99622 126 aa11.79□□□□□ -0.52
CIRBP-246ENST00000628979 VAMP8Q9BV40 100 aa11.78□□□□□ -0.52
CIRBP-246ENST00000628979 LAMTOR3Q9UHA4 124 aa11.78□□□□□ -0.52
CIRBP-246ENST00000628979 DLEU1O43261 78 aa11.77□□□□□ -0.53
CIRBP-246ENST00000628979 Q1RN00 199 aa11.75□□□□□ -0.53
CIRBP-246ENST00000628979 RNF213Q63HN8 5207 aa11.75□□□□□ -0.53
CIRBP-246ENST00000628979 TEX49A0A1B0GTD5 131 aa11.74□□□□□ -0.53
CIRBP-246ENST00000628979 VAMP3Q15836 100 aa11.74□□□□□ -0.53
CIRBP-246ENST00000628979 TMA7Q9Y2S6 64 aaKnown RBP11.74□□□□□ -0.53
CIRBP-246ENST00000628979 HRCT1Q6UXD1 115 aa11.72□□□□□ -0.53
CIRBP-246ENST00000628979 NHP2Q9NX24 153 aaKnown RBP11.72□□□□□ -0.53
CIRBP-246ENST00000628979 SLC25A20O43772 301 aa11.71□□□□□ -0.53
CIRBP-246ENST00000628979 CDIP1Q9H305 208 aa11.71□□□□□ -0.53
CIRBP-246ENST00000628979 LINC01547P58512 204 aaPredicted RBP11.69□□□□□ -0.54
CIRBP-246ENST00000628979 RPS29P62273 56 aaKnown RBP11.69□□□□□ -0.54
CIRBP-246ENST00000628979 TPRXLQ17RH7 258 aa11.69□□□□□ -0.54
CIRBP-246ENST00000628979 FP248Q71RG6 208 aaPredicted RBP11.69□□□□□ -0.54
CIRBP-246ENST00000628979 Q8N377 158 aa11.69□□□□□ -0.54
CIRBP-246ENST00000628979 HIGD1BQ9P298 99 aa11.69□□□□□ -0.54
CIRBP-246ENST00000628979 H7C2G1 150 aa11.68□□□□□ -0.54
CIRBP-246ENST00000628979 LINC00575Q6W349 94 aa11.67□□□□□ -0.54
CIRBP-246ENST00000628979 C2orf91Q6ZV80 131 aa11.67□□□□□ -0.54
CIRBP-246ENST00000628979 IGLV5-48A0A075B6I7 105 aa11.66□□□□□ -0.54
CIRBP-246ENST00000628979 SMIM29Q86T20 159 aa11.66□□□□□ -0.54
CIRBP-246ENST00000628979 RAB37Q96AX2 223 aa11.66□□□□□ -0.54
CIRBP-246ENST00000628979 CFC1BP0CG36 223 aa11.65□□□□□ -0.54
CIRBP-246ENST00000628979 CFC1P0CG37 223 aa11.65□□□□□ -0.54
CIRBP-246ENST00000628979 hADV29S1A0JD25 119 aa11.64□□□□□ -0.55
CIRBP-246ENST00000628979 PYY3Q5JQD4 70 aa11.64□□□□□ -0.55
CIRBP-246ENST00000628979 PRO1933Q9H354 126 aa11.64□□□□□ -0.55
CIRBP-246ENST00000628979 BVES-AS1Q5T3Y7 98 aa11.61□□□□□ -0.55
CIRBP-246ENST00000628979 Q6ZQY7 126 aa11.6□□□□□ -0.55
CIRBP-246ENST00000628979 CEND1Q8N111 149 aa11.6□□□□□ -0.55
CIRBP-246ENST00000628979 A0A0G2JQZ4 141 aa11.59□□□□□ -0.55
CIRBP-246ENST00000628979 LIMD2Q9BT23 127 aa11.59□□□□□ -0.55
CIRBP-246ENST00000628979 A0A0B4J2C4 111 aa11.57□□□□□ -0.56
CIRBP-246ENST00000628979 KRTAP13-3Q3SY46 172 aa11.57□□□□□ -0.56
CIRBP-246ENST00000628979 F8WEM9 126 aa11.56□□□□□ -0.56
CIRBP-246ENST00000628979 CD164Q04900 197 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms