RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 PRR3P79522 188 aaKnown RBP6.1□□□□□ -1.43
SOX2-OT-249ENST00000628810 HIST1H4GQ99525 98 aa6.1□□□□□ -1.43
SOX2-OT-249ENST00000628810 KRTAP17-1Q9BYP8 105 aa6.1□□□□□ -1.43
SOX2-OT-249ENST00000628810 FAT1Q14517 4588 aa6.09□□□□□ -1.43
SOX2-OT-249ENST00000628810 IGLV6-57P01721 117 aa6.09□□□□□ -1.43
SOX2-OT-249ENST00000628810 UBE2BP63146 152 aa6.09□□□□□ -1.43
SOX2-OT-249ENST00000628810 PSORS1C2Q9UIG4 136 aa6.09□□□□□ -1.43
SOX2-OT-249ENST00000628810 GAGE10A6NGK3 116 aa6.08□□□□□ -1.44
SOX2-OT-249ENST00000628810 HNRNPA3P51991 378 aaKnown RBP6.08□□□□□ -1.44
SOX2-OT-249ENST00000628810 HSD52Q0P140 79 aa6.08□□□□□ -1.44
SOX2-OT-249ENST00000628810 Q5VSD8 79 aa6.08□□□□□ -1.44
SOX2-OT-249ENST00000628810 PRO1933Q9H354 126 aa6.08□□□□□ -1.44
SOX2-OT-249ENST00000628810 TRBV10-3A0A0K0K1G6 114 aa6.07□□□□□ -1.44
SOX2-OT-249ENST00000628810 A4D1N5 150 aa6.07□□□□□ -1.44
SOX2-OT-249ENST00000628810 RPL37AP8A6NKH3 93 aa6.07□□□□□ -1.44
SOX2-OT-249ENST00000628810 TSTD3H0UI37 97 aa6.07□□□□□ -1.44
SOX2-OT-249ENST00000628810 PRYO14603 147 aa6.07□□□□□ -1.44
SOX2-OT-249ENST00000628810 DDTP30046 118 aa6.07□□□□□ -1.44
SOX2-OT-249ENST00000628810 RPL37AP61513 92 aaKnown RBP6.07□□□□□ -1.44
SOX2-OT-249ENST00000628810 CEND1Q8N111 149 aa6.07□□□□□ -1.44
SOX2-OT-249ENST00000628810 LINC00337Q8N6G1 96 aa6.07□□□□□ -1.44
SOX2-OT-249ENST00000628810 KCNQ1DNQ9H478 68 aa6.07□□□□□ -1.44
SOX2-OT-249ENST00000628810 SPRR1AP35321 89 aa6.06□□□□□ -1.44
SOX2-OT-249ENST00000628810 TMEM126AQ9H061 195 aa6.06□□□□□ -1.44
SOX2-OT-249ENST00000628810 S100A7L2Q5SY68 101 aa6.05□□□□□ -1.44
SOX2-OT-249ENST00000628810 REG3GQ6UW15 175 aa6.05□□□□□ -1.44
SOX2-OT-249ENST00000628810 CBY1Q9Y3M2 126 aa6.05□□□□□ -1.44
SOX2-OT-249ENST00000628810 TRAV23DV6A0A075B6W5 121 aa6.04□□□□□ -1.44
SOX2-OT-249ENST00000628810 TRAV13-2A0A0B4J235 113 aa6.04□□□□□ -1.44
SOX2-OT-249ENST00000628810 A0A0B4J2C4 111 aa6.04□□□□□ -1.44
SOX2-OT-249ENST00000628810 KRTAP4-16G5E9R7 235 aaPredicted RBP6.04□□□□□ -1.44
SOX2-OT-249ENST00000628810 BCE1O60756 84 aa6.04□□□□□ -1.44
SOX2-OT-249ENST00000628810 FXYD2P54710 66 aa6.04□□□□□ -1.44
SOX2-OT-249ENST00000628810 C1orf137Q5JT78 98 aa6.04□□□□□ -1.44
SOX2-OT-249ENST00000628810 KRTAP13-1Q8IUC0 172 aa6.04□□□□□ -1.44
SOX2-OT-249ENST00000628810 SRRM2Q9UQ35 2752 aaKnown RBP6.04□□□□□ -1.44
SOX2-OT-249ENST00000628810 IGLV7-43P04211 117 aa6.03□□□□□ -1.44
SOX2-OT-249ENST00000628810 CFC1BP0CG36 223 aa6.03□□□□□ -1.44
SOX2-OT-249ENST00000628810 CFC1P0CG37 223 aa6.03□□□□□ -1.44
SOX2-OT-249ENST00000628810 PKHD1L1Q86WI1 4243 aa6.03□□□□□ -1.44
SOX2-OT-249ENST00000628810 A0A1B0GWB2 263 aa6.02□□□□□ -1.45
SOX2-OT-249ENST00000628810 OR13C6PQ8NH95 151 aa6.02□□□□□ -1.45
SOX2-OT-249ENST00000628810 A6NDN8 102 aa6.01□□□□□ -1.45
SOX2-OT-249ENST00000628810 H0Y9J4 135 aa6.01□□□□□ -1.45
SOX2-OT-249ENST00000628810 ZNF73O43830 326 aaPredicted RBP6.01□□□□□ -1.45
SOX2-OT-249ENST00000628810 C9orf118A6NHY6 69 aa6□□□□□ -1.45
SOX2-OT-249ENST00000628810 ZNF861PO60384 105 aa6□□□□□ -1.45
SOX2-OT-249ENST00000628810 RPL13AP40429 203 aaKnown RBP6□□□□□ -1.45
SOX2-OT-249ENST00000628810 CTAG1AP78358 180 aa6□□□□□ -1.45
SOX2-OT-249ENST00000628810 BVES-AS1Q5T3Y7 98 aa6□□□□□ -1.45
SOX2-OT-249ENST00000628810 TRBV7-6A0A0J9YX20 115 aa5.99□□□□□ -1.45
SOX2-OT-249ENST00000628810 B5MCH6 92 aa5.99□□□□□ -1.45
SOX2-OT-249ENST00000628810 M0R143 59 aa5.99□□□□□ -1.45
SOX2-OT-249ENST00000628810 RPL28P46779 137 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-249ENST00000628810 SPINK6Q6UWN8 80 aa5.99□□□□□ -1.45
SOX2-OT-249ENST00000628810 Q6ZRX8 168 aa5.99□□□□□ -1.45
SOX2-OT-249ENST00000628810 SMIM11BQ8TCY0 68 aa5.99□□□□□ -1.45
SOX2-OT-249ENST00000628810 DIRC1Q969H9 104 aa5.99□□□□□ -1.45
SOX2-OT-249ENST00000628810 RAB37Q96AX2 223 aa5.99□□□□□ -1.45
SOX2-OT-249ENST00000628810 ETDCA0A1B0GVM5 59 aa5.98□□□□□ -1.45
SOX2-OT-249ENST00000628810 UBE2AP49459 152 aa5.98□□□□□ -1.45
SOX2-OT-249ENST00000628810 ELOF1P60002 83 aaKnown RBP5.98□□□□□ -1.45
SOX2-OT-249ENST00000628810 C6orf99Q4VX62 202 aa5.98□□□□□ -1.45
SOX2-OT-249ENST00000628810 FAM19A1Q7Z5A9 133 aa5.98□□□□□ -1.45
SOX2-OT-249ENST00000628810 NHP2Q9NX24 153 aaKnown RBP5.98□□□□□ -1.45
SOX2-OT-249ENST00000628810 PRLHP81277 87 aa5.97□□□□□ -1.45
SOX2-OT-249ENST00000628810 PRO1854Q9UHT4 67 aa5.97□□□□□ -1.45
SOX2-OT-249ENST00000628810 K7ERJ3 54 aa5.96□□□□□ -1.46
SOX2-OT-249ENST00000628810 HINT1P49773 126 aaPredicted RBP5.96□□□□□ -1.46
SOX2-OT-249ENST00000628810 Q9BRP9 147 aa5.96□□□□□ -1.46
SOX2-OT-249ENST00000628810 ABCA13Q86UQ4 5058 aa5.96□□□□□ -1.46
SOX2-OT-249ENST00000628810 COX7BP24311 80 aa5.95□□□□□ -1.46
SOX2-OT-249ENST00000628810 SMCR5Q8TEV8 140 aa5.95□□□□□ -1.46
SOX2-OT-249ENST00000628810 H7C2G1 150 aa5.93□□□□□ -1.46
SOX2-OT-249ENST00000628810 INAFM2P0DMQ5 153 aa5.93□□□□□ -1.46
SOX2-OT-249ENST00000628810 HIGD2AQ9BW72 106 aa5.93□□□□□ -1.46
SOX2-OT-249ENST00000628810 DHRS4-AS1Q9P1J3 65 aa5.93□□□□□ -1.46
SOX2-OT-249ENST00000628810 TSPAN13O95857 204 aa5.92□□□□□ -1.46
SOX2-OT-249ENST00000628810 KRTAP1-4P0C5Y4 121 aa5.92□□□□□ -1.46
SOX2-OT-249ENST00000628810 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
SOX2-OT-249ENST00000628810 MYCBP2O75592 4640 aa5.92□□□□□ -1.46
SOX2-OT-249ENST00000628810 VAMP3Q15836 100 aa5.91□□□□□ -1.46
SOX2-OT-249ENST00000628810 Q1RN00 199 aa5.91□□□□□ -1.46
SOX2-OT-249ENST00000628810 TRIAP1O43715 76 aa5.9□□□□□ -1.46
SOX2-OT-249ENST00000628810 ERC2-IT1O76042 136 aa5.9□□□□□ -1.46
SOX2-OT-249ENST00000628810 LINC00575Q6W349 94 aa5.9□□□□□ -1.46
SOX2-OT-249ENST00000628810 SPRR4Q96PI1 79 aa5.9□□□□□ -1.46
SOX2-OT-249ENST00000628810 ZNF706Q9Y5V0 76 aaPredicted RBP5.9□□□□□ -1.46
SOX2-OT-249ENST00000628810 FAT3Q8TDW7 4589 aa5.89□□□□□ -1.47
SOX2-OT-249ENST00000628810 H0YGX0 51 aa5.89□□□□□ -1.47
SOX2-OT-249ENST00000628810 BATFQ16520 125 aa5.89□□□□□ -1.47
SOX2-OT-249ENST00000628810 LINC00483Q53H64 154 aa5.89□□□□□ -1.47
SOX2-OT-249ENST00000628810 SNHG12Q9BXW3 62 aa5.89□□□□□ -1.47
SOX2-OT-249ENST00000628810 LRP1Q07954 4544 aaKnown RBP5.87□□□□□ -1.47
SOX2-OT-249ENST00000628810 A0A1B0GX51 115 aa5.87□□□□□ -1.47
SOX2-OT-249ENST00000628810 SLC25A20O43772 301 aa5.87□□□□□ -1.47
SOX2-OT-249ENST00000628810 OXTP01178 125 aa5.87□□□□□ -1.47
SOX2-OT-249ENST00000628810 FAM229BQ4G0N7 80 aa5.87□□□□□ -1.47
SOX2-OT-249ENST00000628810 LINC01600Q96MT4 127 aa5.87□□□□□ -1.47
SOX2-OT-249ENST00000628810 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms