RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 CBY1Q9Y3M2 126 aa11.48□□□□□ -0.57
MECP2-216ENST00000627864 ETDCA0A1B0GVM5 59 aa11.47□□□□□ -0.57
MECP2-216ENST00000627864 SPRR1AP35321 89 aa11.47□□□□□ -0.57
MECP2-216ENST00000627864 PRLHP81277 87 aa11.47□□□□□ -0.57
MECP2-216ENST00000627864 HSD52Q0P140 79 aa11.47□□□□□ -0.57
MECP2-216ENST00000627864 FLG2Q5D862 2391 aaPredicted RBP11.46□□□□□ -0.58
MECP2-216ENST00000627864 DIRC1Q969H9 104 aa11.45□□□□□ -0.58
MECP2-216ENST00000627864 KRTAP4-16G5E9R7 235 aaPredicted RBP11.44□□□□□ -0.58
MECP2-216ENST00000627864 ZNF73O43830 326 aaPredicted RBP11.44□□□□□ -0.58
MECP2-216ENST00000627864 KRTAP13-1Q8IUC0 172 aa11.44□□□□□ -0.58
MECP2-216ENST00000627864 TSTD3H0UI37 97 aa11.42□□□□□ -0.58
MECP2-216ENST00000627864 H0Y9J4 135 aa11.42□□□□□ -0.58
MECP2-216ENST00000627864 CFC1BP0CG36 223 aa11.42□□□□□ -0.58
MECP2-216ENST00000627864 CFC1P0CG37 223 aa11.42□□□□□ -0.58
MECP2-216ENST00000627864 FXYD2P54710 66 aa11.42□□□□□ -0.58
MECP2-216ENST00000627864 TMEM238LA0A1B0GVL6 79 aa11.41□□□□□ -0.58
MECP2-216ENST00000627864 A6NJY4 79 aa11.41□□□□□ -0.58
MECP2-216ENST00000627864 B5MCH6 92 aa11.41□□□□□ -0.58
MECP2-216ENST00000627864 HINT1P49773 126 aaPredicted RBP11.41□□□□□ -0.58
MECP2-216ENST00000627864 RAB37Q96AX2 223 aa11.41□□□□□ -0.58
MECP2-216ENST00000627864 RPL13AP40429 203 aaKnown RBP11.4□□□□□ -0.58
MECP2-216ENST00000627864 C6orf99Q4VX62 202 aa11.39□□□□□ -0.59
MECP2-216ENST00000627864 SMIM11BQ8TCY0 68 aa11.39□□□□□ -0.59
MECP2-216ENST00000627864 HIGD2AQ9BW72 106 aa11.39□□□□□ -0.59
MECP2-216ENST00000627864 PKHD1L1Q86WI1 4243 aa11.38□□□□□ -0.59
MECP2-216ENST00000627864 A0A0B4J2C4 111 aa11.38□□□□□ -0.59
MECP2-216ENST00000627864 CTAG1AP78358 180 aa11.38□□□□□ -0.59
MECP2-216ENST00000627864 Q6ZRX8 168 aa11.37□□□□□ -0.59
MECP2-216ENST00000627864 H7C2G1 150 aa11.36□□□□□ -0.59
MECP2-216ENST00000627864 COX7BP24311 80 aa11.36□□□□□ -0.59
MECP2-216ENST00000627864 ABCA13Q86UQ4 5058 aa11.35□□□□□ -0.59
MECP2-216ENST00000627864 BVES-AS1Q5T3Y7 98 aa11.35□□□□□ -0.59
MECP2-216ENST00000627864 SMCR5Q8TEV8 140 aa11.35□□□□□ -0.59
MECP2-216ENST00000627864 NHP2Q9NX24 153 aaKnown RBP11.35□□□□□ -0.59
MECP2-216ENST00000627864 PRO1854Q9UHT4 67 aa11.34□□□□□ -0.59
MECP2-216ENST00000627864 Q9BRP9 147 aa11.33□□□□□ -0.6
MECP2-216ENST00000627864 TRBV7-6A0A0J9YX20 115 aa11.32□□□□□ -0.6
MECP2-216ENST00000627864 ELOF1P60002 83 aaKnown RBP11.32□□□□□ -0.6
MECP2-216ENST00000627864 A0A1B0GWB2 263 aa11.31□□□□□ -0.6
MECP2-216ENST00000627864 K7ERJ3 54 aa11.3□□□□□ -0.6
MECP2-216ENST00000627864 M0R143 59 aa11.3□□□□□ -0.6
MECP2-216ENST00000627864 ERC2-IT1O76042 136 aa11.3□□□□□ -0.6
MECP2-216ENST00000627864 OXTP01178 125 aa11.3□□□□□ -0.6
MECP2-216ENST00000627864 VAMP3Q15836 100 aa11.3□□□□□ -0.6
MECP2-216ENST00000627864 Q1RN00 199 aa11.3□□□□□ -0.6
MECP2-216ENST00000627864 KRTAP1-4P0C5Y4 121 aa11.29□□□□□ -0.6
MECP2-216ENST00000627864 KRTAP29-1A8MX34 341 aaPredicted RBP11.28□□□□□ -0.6
MECP2-216ENST00000627864 DHRS4-AS1Q9P1J3 65 aa11.28□□□□□ -0.6
MECP2-216ENST00000627864 LINC01600Q96MT4 127 aa11.27□□□□□ -0.61
MECP2-216ENST00000627864 SPRR4Q96PI1 79 aa11.26□□□□□ -0.61
MECP2-216ENST00000627864 ANAPC11Q9NYG5 84 aa11.26□□□□□ -0.61
MECP2-216ENST00000627864 ZNF706Q9Y5V0 76 aaPredicted RBP11.26□□□□□ -0.61
MECP2-216ENST00000627864 J3QL48 77 aa11.23□□□□□ -0.61
MECP2-216ENST00000627864 PRR26Q8N8Z3 221 aa11.23□□□□□ -0.61
MECP2-216ENST00000627864 GAGE2AQ6NT46 116 aa11.22□□□□□ -0.61
MECP2-216ENST00000627864 ST20-AS1Q8NBB2 130 aa11.22□□□□□ -0.61
MECP2-216ENST00000627864 SLC25A20O43772 301 aa11.21□□□□□ -0.61
MECP2-216ENST00000627864 BATFQ16520 125 aa11.21□□□□□ -0.61
MECP2-216ENST00000627864 LINC00575Q6W349 94 aa11.21□□□□□ -0.61
MECP2-216ENST00000627864 PCLOQ9Y6V0 5065 aa11.21□□□□□ -0.62
MECP2-216ENST00000627864 TSPAN13O95857 204 aa11.2□□□□□ -0.62
MECP2-216ENST00000627864 PSMB2P49721 201 aa11.2□□□□□ -0.62
MECP2-216ENST00000627864 H0YGX0 51 aa11.19□□□□□ -0.62
MECP2-216ENST00000627864 CRYGAP11844 174 aa11.19□□□□□ -0.62
MECP2-216ENST00000627864 FAM229BQ4G0N7 80 aa11.19□□□□□ -0.62
MECP2-216ENST00000627864 A0A087X002 238 aa11.18□□□□□ -0.62
MECP2-216ENST00000627864 TRIAP1O43715 76 aa11.18□□□□□ -0.62
MECP2-216ENST00000627864 MT1HL1P0DM35 61 aa11.18□□□□□ -0.62
MECP2-216ENST00000627864 KRTAP10-8P60410 259 aa11.18□□□□□ -0.62
MECP2-216ENST00000627864 hADV29S1A0JD25 119 aa11.17□□□□□ -0.62
MECP2-216ENST00000627864 DEFB105AQ8NG35 78 aa11.16□□□□□ -0.62
MECP2-216ENST00000627864 LRP1Q07954 4544 aaKnown RBP11.16□□□□□ -0.62
MECP2-216ENST00000627864 LINC00483Q53H64 154 aa11.15□□□□□ -0.62
MECP2-216ENST00000627864 MYCBP2O75592 4640 aa11.15□□□□□ -0.62
MECP2-216ENST00000627864 FAT3Q8TDW7 4589 aa11.14□□□□□ -0.63
MECP2-216ENST00000627864 COX6CP09669 75 aa11.13□□□□□ -0.63
MECP2-216ENST00000627864 KRTAP13-2Q52LG2 175 aa11.13□□□□□ -0.63
MECP2-216ENST00000627864 FAM218AQ96MZ4 157 aa11.13□□□□□ -0.63
MECP2-216ENST00000627864 PCP4L1A6NKN8 68 aa11.12□□□□□ -0.63
MECP2-216ENST00000627864 SNCGO76070 127 aa11.12□□□□□ -0.63
MECP2-216ENST00000627864 TYMSOSQ8TAI1 123 aa11.12□□□□□ -0.63
MECP2-216ENST00000627864 SPRR1BP22528 89 aa11.11□□□□□ -0.63
MECP2-216ENST00000627864 Q6ZQY7 126 aa11.11□□□□□ -0.63
MECP2-216ENST00000627864 C3orf22Q8N5N4 141 aa11.11□□□□□ -0.63
MECP2-216ENST00000627864 CLEC2BQ92478 149 aa11.11□□□□□ -0.63
MECP2-216ENST00000627864 TEX49A0A1B0GTD5 131 aa11.1□□□□□ -0.63
MECP2-216ENST00000627864 SCGB1C2P0DMR2 95 aa11.1□□□□□ -0.63
MECP2-216ENST00000627864 DMBT1Q9UGM3 2413 aaPredicted RBP11.09□□□□□ -0.63
MECP2-216ENST00000627864 LINC01547P58512 204 aaPredicted RBP11.09□□□□□ -0.63
MECP2-216ENST00000627864 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.09□□□□□ -0.63
MECP2-216ENST00000627864 NAA38Q9BRA0 125 aaKnown RBP11.09□□□□□ -0.63
MECP2-216ENST00000627864 IGLV5-48A0A075B6I7 105 aa11.08□□□□□ -0.64
MECP2-216ENST00000627864 IGLV9-49A0A0B4J1Y8 123 aa11.08□□□□□ -0.64
MECP2-216ENST00000627864 SNHG12Q9BXW3 62 aa11.07□□□□□ -0.64
MECP2-216ENST00000627864 A0A1B0GX51 115 aa11.06□□□□□ -0.64
MECP2-216ENST00000627864 Q8N377 158 aa11.06□□□□□ -0.64
MECP2-216ENST00000627864 LAMTOR3Q9UHA4 124 aa11.06□□□□□ -0.64
MECP2-216ENST00000627864 MOBPQ13875 183 aa11.04□□□□□ -0.64
MECP2-216ENST00000627864 C9orf153Q5TBE3 101 aa11.03□□□□□ -0.64
MECP2-216ENST00000627864 SMIM29Q86T20 159 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 2713 ms