RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 LINC00612Q8N6U2 182 aa8.41□□□□□ -1.06
SCN8A-209ENST00000627620 ERC2-IT1O76042 136 aa8.4□□□□□ -1.06
SCN8A-209ENST00000627620 A0A087WTM6 91 aa8.39□□□□□ -1.07
SCN8A-209ENST00000627620 COA5Q86WW8 74 aa8.39□□□□□ -1.07
SCN8A-209ENST00000627620 Q8N377 158 aa8.39□□□□□ -1.07
SCN8A-209ENST00000627620 C8orf17Q9NRJ1 99 aa8.39□□□□□ -1.07
SCN8A-209ENST00000627620 PRR15Q8IV56 129 aa8.39□□□□□ -1.07
SCN8A-209ENST00000627620 LINC00304Q8N9R0 145 aa8.39□□□□□ -1.07
SCN8A-209ENST00000627620 SSBP3-AS1Q7Z2R9 100 aa8.38□□□□□ -1.07
SCN8A-209ENST00000627620 A0A0G2JQZ4 141 aa8.37□□□□□ -1.07
SCN8A-209ENST00000627620 A0A1W2PNN7 141 aa8.37□□□□□ -1.07
SCN8A-209ENST00000627620 LINC01600Q96MT4 127 aa8.37□□□□□ -1.07
SCN8A-209ENST00000627620 C9orf163Q8N9P6 203 aa8.37□□□□□ -1.07
SCN8A-209ENST00000627620 TLX1NBP0CAT3 122 aa8.36□□□□□ -1.07
SCN8A-209ENST00000627620 OBSCN-AS1Q96MR7 158 aa8.36□□□□□ -1.07
SCN8A-209ENST00000627620 A0A1B0GVX0 72 aa8.35□□□□□ -1.07
SCN8A-209ENST00000627620 PLA2G2DQ9UNK4 145 aa8.35□□□□□ -1.07
SCN8A-209ENST00000627620 GOLGB1Q14789 3259 aaKnown RBP8.35□□□□□ -1.07
SCN8A-209ENST00000627620 C9orf92A6NGG3 77 aa8.34□□□□□ -1.07
SCN8A-209ENST00000627620 SMR3BP02814 79 aaPredicted RBP8.34□□□□□ -1.07
SCN8A-209ENST00000627620 COX6B2Q6YFQ2 88 aa8.34□□□□□ -1.07
SCN8A-209ENST00000627620 ANAPC11Q9NYG5 84 aa8.34□□□□□ -1.07
SCN8A-209ENST00000627620 A8MUN3 132 aa8.33□□□□□ -1.08
SCN8A-209ENST00000627620 FLNBO75369 2602 aaKnown RBP8.32□□□□□ -1.08
SCN8A-209ENST00000627620 CASC10Q5T4H9 136 aa8.31□□□□□ -1.08
SCN8A-209ENST00000627620 IGLV7-43P04211 117 aa8.3□□□□□ -1.08
SCN8A-209ENST00000627620 HECTD1Q9ULT8 2610 aa8.3□□□□□ -1.08
SCN8A-209ENST00000627620 UQCR11O14957 56 aa8.3□□□□□ -1.08
SCN8A-209ENST00000627620 USP24Q9UPU5 2620 aa8.29□□□□□ -1.08
SCN8A-209ENST00000627620 APLNQ9ULZ1 77 aa8.29□□□□□ -1.08
SCN8A-209ENST00000627620 PSORS1C2Q9UIG4 136 aa8.29□□□□□ -1.08
SCN8A-209ENST00000627620 KRTAP1-3Q8IUG1 177 aa8.29□□□□□ -1.08
SCN8A-209ENST00000627620 CYP4F30PQ9H0H9 118 aa8.28□□□□□ -1.08
SCN8A-209ENST00000627620 MGAM2Q2M2H8 2515 aa8.28□□□□□ -1.08
SCN8A-209ENST00000627620 SPINT4Q6UDR6 99 aa8.28□□□□□ -1.08
SCN8A-209ENST00000627620 KLKP1Q107X0 134 aa8.27□□□□□ -1.08
SCN8A-209ENST00000627620 CNBPP62633 177 aaKnown RBP8.26□□□□□ -1.09
SCN8A-209ENST00000627620 SPRR4Q96PI1 79 aa8.26□□□□□ -1.09
SCN8A-209ENST00000627620 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
SCN8A-209ENST00000627620 KRTAP1-1Q07627 177 aa8.24□□□□□ -1.09
SCN8A-209ENST00000627620 PRRC2CQ9Y520 2896 aaKnown RBP8.24□□□□□ -1.09
SCN8A-209ENST00000627620 A0A1W2PNM2 257 aa8.24□□□□□ -1.09
SCN8A-209ENST00000627620 LINC00336Q6ZUF6 198 aa8.22□□□□□ -1.09
SCN8A-209ENST00000627620 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
SCN8A-209ENST00000627620 IGLV5-37A0A075B6J1 123 aa8.2□□□□□ -1.1
SCN8A-209ENST00000627620 H7BZZ5 65 aa8.19□□□□□ -1.1
SCN8A-209ENST00000627620 CRIPTQ9P021 101 aa8.17□□□□□ -1.1
SCN8A-209ENST00000627620 RBM12B-AS1Q9P1G2 102 aa8.16□□□□□ -1.1
SCN8A-209ENST00000627620 IGLV5-48A0A075B6I7 105 aa8.15□□□□□ -1.11
SCN8A-209ENST00000627620 Q8N1X5 172 aa8.13□□□□□ -1.11
SCN8A-209ENST00000627620 FAM104AQ969W3 186 aa8.12□□□□□ -1.11
SCN8A-209ENST00000627620 BPTFQ12830 3046 aa8.11□□□□□ -1.11
SCN8A-209ENST00000627620 TNP2Q05952 138 aa8.11□□□□□ -1.11
SCN8A-209ENST00000627620 SPANXA2-OT1Q8N9U9 137 aa8.1□□□□□ -1.11
SCN8A-209ENST00000627620 LINC01554Q52M75 96 aa8.09□□□□□ -1.11
SCN8A-209ENST00000627620 DNAH12Q6ZR08 3092 aa8.09□□□□□ -1.11
SCN8A-209ENST00000627620 ATRQ13535 2644 aa8.08□□□□□ -1.12
SCN8A-209ENST00000627620 FLNAP21333 2647 aaKnown RBP8.08□□□□□ -1.12
SCN8A-209ENST00000627620 A0A0D9SG42 100 aa8.07□□□□□ -1.12
SCN8A-209ENST00000627620 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.06□□□□□ -1.12
SCN8A-209ENST00000627620 CD164Q04900 197 aa8.04□□□□□ -1.12
SCN8A-209ENST00000627620 MAST4O15021 2626 aa8.04□□□□□ -1.12
SCN8A-209ENST00000627620 ITPR3Q14573 2671 aa8.03□□□□□ -1.12
SCN8A-209ENST00000627620 OCR1Q9BZK8 76 aa8.02□□□□□ -1.13
SCN8A-209ENST00000627620 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.13
SCN8A-209ENST00000627620 PRR26Q8N8Z3 221 aa8.01□□□□□ -1.13
SCN8A-209ENST00000627620 CR1P17927 2039 aa8□□□□□ -1.13
SCN8A-209ENST00000627620 Q6ZSA8 131 aa8□□□□□ -1.13
SCN8A-209ENST00000627620 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
SCN8A-209ENST00000627620 HELZ2Q9BYK8 2649 aaKnown RBP7.98□□□□□ -1.13
SCN8A-209ENST00000627620 WIPF1O43516 503 aa7.97□□□□□ -1.13
SCN8A-209ENST00000627620 KTN1-AS1Q86SY8 53 aa7.97□□□□□ -1.13
SCN8A-209ENST00000627620 FAM229BQ4G0N7 80 aa7.94□□□□□ -1.14
SCN8A-209ENST00000627620 LCA10Q71F78 164 aa7.93□□□□□ -1.14
SCN8A-209ENST00000627620 HRES1P13985 223 aa7.93□□□□□ -1.14
SCN8A-209ENST00000627620 PLAC8Q9NZF1 115 aa7.92□□□□□ -1.14
SCN8A-209ENST00000627620 CEP350Q5VT06 3117 aa7.91□□□□□ -1.14
SCN8A-209ENST00000627620 Q8NDZ9 215 aa7.9□□□□□ -1.14
SCN8A-209ENST00000627620 Q1T7F1 81 aa7.89□□□□□ -1.15
SCN8A-209ENST00000627620 CFAP46Q8IYW2 2715 aa7.89□□□□□ -1.15
SCN8A-209ENST00000627620 SPRR1AP35321 89 aa7.88□□□□□ -1.15
SCN8A-209ENST00000627620 MMP24-AS1A0A0U1RRL7 71 aa7.88□□□□□ -1.15
SCN8A-209ENST00000627620 UTRNP46939 3433 aa7.87□□□□□ -1.15
SCN8A-209ENST00000627620 A0A1B0GU33 70 aa7.87□□□□□ -1.15
SCN8A-209ENST00000627620 ZCCHC13Q8WW36 166 aaKnown RBP7.85□□□□□ -1.15
SCN8A-209ENST00000627620 CAMK2N1Q7Z7J9 78 aa7.85□□□□□ -1.15
SCN8A-209ENST00000627620 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.15
SCN8A-209ENST00000627620 CENPEQ02224 2701 aa7.83□□□□□ -1.16
SCN8A-209ENST00000627620 M0R2T5 61 aa7.83□□□□□ -1.16
SCN8A-209ENST00000627620 CHD7Q9P2D1 2997 aa7.82□□□□□ -1.16
SCN8A-209ENST00000627620 SPRR1BP22528 89 aa7.8□□□□□ -1.16
SCN8A-209ENST00000627620 STAB1Q9NY15 2570 aa7.8□□□□□ -1.16
SCN8A-209ENST00000627620 C5orf42Q9H799 3197 aa7.8□□□□□ -1.16
SCN8A-209ENST00000627620 KRTAP1-5Q9BYS1 174 aa7.8□□□□□ -1.16
SCN8A-209ENST00000627620 Q75L30 129 aa7.79□□□□□ -1.16
SCN8A-209ENST00000627620 LINC00472Q9H8W2 130 aa7.78□□□□□ -1.16
SCN8A-209ENST00000627620 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
SCN8A-209ENST00000627620 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
SCN8A-209ENST00000627620 Q5W150 140 aa7.77□□□□□ -1.17
SCN8A-209ENST00000627620 S4R3F8 94 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms