RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 LINC00483Q53H64 154 aa6.22□□□□□ -1.41
SSBP4-215ENST00000625926 LINC01545Q5VT33 79 aa6.22□□□□□ -1.41
SSBP4-215ENST00000625926 PET117Q6UWS5 81 aa6.22□□□□□ -1.41
SSBP4-215ENST00000625926 SOSTDC1Q6X4U4 206 aa6.22□□□□□ -1.41
SSBP4-215ENST00000625926 Q6ZRX8 168 aa6.22□□□□□ -1.41
SSBP4-215ENST00000625926 Q8NBF4 154 aa6.22□□□□□ -1.41
SSBP4-215ENST00000625926 TRAV23DV6A0A075B6W5 121 aa6.21□□□□□ -1.42
SSBP4-215ENST00000625926 ERC2-IT1O76042 136 aa6.21□□□□□ -1.42
SSBP4-215ENST00000625926 JOSD1Q15040 202 aaPredicted RBP6.21□□□□□ -1.42
SSBP4-215ENST00000625926 TPRXLQ17RH7 258 aa6.21□□□□□ -1.42
SSBP4-215ENST00000625926 Q9BRP9 147 aa6.21□□□□□ -1.42
SSBP4-215ENST00000625926 CDIP1Q9H305 208 aa6.21□□□□□ -1.42
SSBP4-215ENST00000625926 TMA7Q9Y2S6 64 aaKnown RBP6.21□□□□□ -1.42
SSBP4-215ENST00000625926 ZNF73O43830 326 aaPredicted RBP6.2□□□□□ -1.42
SSBP4-215ENST00000625926 EIF4EBP3O60516 100 aaPredicted RBP6.2□□□□□ -1.42
SSBP4-215ENST00000625926 CBY1Q9Y3M2 126 aa6.2□□□□□ -1.42
SSBP4-215ENST00000625926 TIMM17BO60830 172 aa6.19□□□□□ -1.42
SSBP4-215ENST00000625926 SPINK1P00995 79 aa6.19□□□□□ -1.42
SSBP4-215ENST00000625926 SSBP3-AS1Q7Z2R9 100 aa6.19□□□□□ -1.42
SSBP4-215ENST00000625926 LINC00308Q8TCZ7 52 aa6.19□□□□□ -1.42
SSBP4-215ENST00000625926 SPANXCQ9NY87 97 aa6.19□□□□□ -1.42
SSBP4-215ENST00000625926 IGLV9-49A0A0B4J1Y8 123 aa6.18□□□□□ -1.42
SSBP4-215ENST00000625926 C3orf79P0CE67 100 aa6.18□□□□□ -1.42
SSBP4-215ENST00000625926 HINT1P49773 126 aaPredicted RBP6.18□□□□□ -1.42
SSBP4-215ENST00000625926 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
SSBP4-215ENST00000625926 LITAFQ99732 161 aa6.18□□□□□ -1.42
SSBP4-215ENST00000625926 A0A0U1RQV1 116 aa6.17□□□□□ -1.42
SSBP4-215ENST00000625926 ZNF815PA8K554 130 aa6.17□□□□□ -1.42
SSBP4-215ENST00000625926 S100A6P06703 90 aa6.17□□□□□ -1.42
SSBP4-215ENST00000625926 MOBPQ13875 183 aa6.17□□□□□ -1.42
SSBP4-215ENST00000625926 COA6Q5JTJ3 125 aaKnown RBP6.17□□□□□ -1.42
SSBP4-215ENST00000625926 FP248Q71RG6 208 aaPredicted RBP6.17□□□□□ -1.42
SSBP4-215ENST00000625926 OR13C6PQ8NH95 151 aa6.17□□□□□ -1.42
SSBP4-215ENST00000625926 C5orf52A6NGY3 159 aa6.16□□□□□ -1.42
SSBP4-215ENST00000625926 KRTDAPP60985 99 aa6.16□□□□□ -1.42
SSBP4-215ENST00000625926 LINC00518Q8N0U6 118 aa6.15□□□□□ -1.42
SSBP4-215ENST00000625926 SPANXDQ9BXN6 97 aa6.15□□□□□ -1.42
SSBP4-215ENST00000625926 TTTY13Q9BZ97 58 aa6.15□□□□□ -1.42
SSBP4-215ENST00000625926 C20orf202A1L168 122 aa6.14□□□□□ -1.43
SSBP4-215ENST00000625926 RPS29P62273 56 aaKnown RBP6.14□□□□□ -1.43
SSBP4-215ENST00000625926 SCGB1D4Q6XE38 83 aa6.13□□□□□ -1.43
SSBP4-215ENST00000625926 ST20-AS1Q8NBB2 130 aa6.13□□□□□ -1.43
SSBP4-215ENST00000625926 DHRS4-AS1Q9P1J3 65 aa6.13□□□□□ -1.43
SSBP4-215ENST00000625926 C9orf153Q5TBE3 101 aa6.12□□□□□ -1.43
SSBP4-215ENST00000625926 SLC25A20O43772 301 aa6.11□□□□□ -1.43
SSBP4-215ENST00000625926 AKR1D1P51857 326 aa6.11□□□□□ -1.43
SSBP4-215ENST00000625926 SLC25A34Q6PIV7 304 aa6.11□□□□□ -1.43
SSBP4-215ENST00000625926 Q8N377 158 aa6.11□□□□□ -1.43
SSBP4-215ENST00000625926 COPS9Q8WXC6 57 aa6.11□□□□□ -1.43
SSBP4-215ENST00000625926 IFITM1P13164 125 aa6.1□□□□□ -1.43
SSBP4-215ENST00000625926 SPRR1BP22528 89 aa6.1□□□□□ -1.43
SSBP4-215ENST00000625926 COX7BP24311 80 aa6.1□□□□□ -1.43
SSBP4-215ENST00000625926 KRTAP13-3Q3SY46 172 aa6.1□□□□□ -1.43
SSBP4-215ENST00000625926 ANKRD39Q53RE8 183 aa6.1□□□□□ -1.43
SSBP4-215ENST00000625926 ELOF1P60002 83 aaKnown RBP6.09□□□□□ -1.43
SSBP4-215ENST00000625926 C6orf99Q4VX62 202 aa6.09□□□□□ -1.43
SSBP4-215ENST00000625926 Q6ZVH6 145 aa6.09□□□□□ -1.43
SSBP4-215ENST00000625926 ATOH7Q8N100 152 aa6.09□□□□□ -1.43
SSBP4-215ENST00000625926 LAMTOR3Q9UHA4 124 aa6.08□□□□□ -1.44
SSBP4-215ENST00000625926 TRBV7-6A0A0J9YX20 115 aa6.07□□□□□ -1.44
SSBP4-215ENST00000625926 A6NDN8 102 aa6.07□□□□□ -1.44
SSBP4-215ENST00000625926 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
SSBP4-215ENST00000625926 TAL2Q16559 108 aa6.07□□□□□ -1.44
SSBP4-215ENST00000625926 PCP2Q8IVA1 136 aa6.07□□□□□ -1.44
SSBP4-215ENST00000625926 MUSTN1Q8IVN3 82 aa6.07□□□□□ -1.44
SSBP4-215ENST00000625926 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
SSBP4-215ENST00000625926 LCE2DQ5TA82 110 aaPredicted RBP6.06□□□□□ -1.44
SSBP4-215ENST00000625926 DEFB105AQ8NG35 78 aa6.05□□□□□ -1.44
SSBP4-215ENST00000625926 TEX49A0A1B0GTD5 131 aa6.04□□□□□ -1.44
SSBP4-215ENST00000625926 A0A1B0GWB2 263 aa6.04□□□□□ -1.44
SSBP4-215ENST00000625926 S100A2P29034 98 aa6.04□□□□□ -1.44
SSBP4-215ENST00000625926 ASB16-AS1Q495Z4 193 aa6.04□□□□□ -1.44
SSBP4-215ENST00000625926 TRAV13-2A0A0B4J235 113 aa6.03□□□□□ -1.44
SSBP4-215ENST00000625926 SEC61BP60468 96 aaKnown RBP6.03□□□□□ -1.44
SSBP4-215ENST00000625926 HRCT1Q6UXD1 115 aa6.03□□□□□ -1.44
SSBP4-215ENST00000625926 HIST3H2BBQ8N257 126 aa6.03□□□□□ -1.44
SSBP4-215ENST00000625926 LIMD2Q9BT23 127 aa6.03□□□□□ -1.44
SSBP4-215ENST00000625926 A4D1N5 150 aa6.02□□□□□ -1.45
SSBP4-215ENST00000625926 HSBP1L1C9JCN9 74 aa6.02□□□□□ -1.45
SSBP4-215ENST00000625926 Q1RN00 199 aa6.02□□□□□ -1.45
SSBP4-215ENST00000625926 HIST1H2BLQ99880 126 aa6.02□□□□□ -1.45
SSBP4-215ENST00000625926 PRO1933Q9H354 126 aa6.02□□□□□ -1.45
SSBP4-215ENST00000625926 MUC17Q685J3 4493 aa6.01□□□□□ -1.45
SSBP4-215ENST00000625926 IGLV5-48A0A075B6I7 105 aa6□□□□□ -1.45
SSBP4-215ENST00000625926 CD164Q04900 197 aa6□□□□□ -1.45
SSBP4-215ENST00000625926 SMIM29Q86T20 159 aa6□□□□□ -1.45
SSBP4-215ENST00000625926 SMIM11BQ8TCY0 68 aa6□□□□□ -1.45
SSBP4-215ENST00000625926 NHP2Q9NX24 153 aaKnown RBP6□□□□□ -1.45
SSBP4-215ENST00000625926 PCP4L1A6NKN8 68 aa5.99□□□□□ -1.45
SSBP4-215ENST00000625926 LINC01547P58512 204 aaPredicted RBP5.99□□□□□ -1.45
SSBP4-215ENST00000625926 XP32Q5T750 250 aa5.99□□□□□ -1.45
SSBP4-215ENST00000625926 H7C2G1 150 aa5.98□□□□□ -1.45
SSBP4-215ENST00000625926 VAMP3Q15836 100 aa5.98□□□□□ -1.45
SSBP4-215ENST00000625926 SCGB1D1O95968 90 aa5.95□□□□□ -1.46
SSBP4-215ENST00000625926 Q5XG85 94 aa5.95□□□□□ -1.46
SSBP4-215ENST00000625926 KRTAP4-1Q9BYQ7 146 aa5.95□□□□□ -1.46
SSBP4-215ENST00000625926 LINC00575Q6W349 94 aa5.94□□□□□ -1.46
SSBP4-215ENST00000625926 SVIPQ8NHG7 77 aa5.94□□□□□ -1.46
SSBP4-215ENST00000625926 A0A0G2JQZ4 141 aa5.93□□□□□ -1.46
SSBP4-215ENST00000625926 C9orf92A6NGG3 77 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms