RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 IGLV5-48A0A075B6I7 105 aa4.25□□□□□ -1.73
CDKL5-205ENST00000623535 SMIM29Q86T20 159 aa4.25□□□□□ -1.73
CDKL5-205ENST00000623535 A8MUN3 132 aa4.25□□□□□ -1.73
CDKL5-205ENST00000623535 CFAP46Q8IYW2 2715 aa4.24□□□□□ -1.73
CDKL5-205ENST00000623535 CSAG1Q6PB30 78 aa4.24□□□□□ -1.73
CDKL5-205ENST00000623535 DSCR10P59022 87 aa4.23□□□□□ -1.73
CDKL5-205ENST00000623535 C11orf21Q9P2W6 132 aa4.21□□□□□ -1.74
CDKL5-205ENST00000623535 LOC105371267A0A1B0GV96 52 aa4.2□□□□□ -1.74
CDKL5-205ENST00000623535 A0A1B0GVX0 72 aa4.2□□□□□ -1.74
CDKL5-205ENST00000623535 K7EQZ3 153 aa4.2□□□□□ -1.74
CDKL5-205ENST00000623535 LITAFQ99732 161 aa4.2□□□□□ -1.74
CDKL5-205ENST00000623535 HELZ2Q9BYK8 2649 aaKnown RBP4.2□□□□□ -1.74
CDKL5-205ENST00000623535 A8MTW9 85 aa4.2□□□□□ -1.74
CDKL5-205ENST00000623535 SETXQ7Z333 2677 aaKnown RBP4.19□□□□□ -1.74
CDKL5-205ENST00000623535 C19orf73Q9NVV2 129 aa4.19□□□□□ -1.74
CDKL5-205ENST00000623535 A0A1W2PPR1 153 aa4.19□□□□□ -1.74
CDKL5-205ENST00000623535 CD164Q04900 197 aa4.19□□□□□ -1.74
CDKL5-205ENST00000623535 CCDC179H3BU77 68 aa4.18□□□□□ -1.74
CDKL5-205ENST00000623535 H7BZZ5 65 aa4.18□□□□□ -1.74
CDKL5-205ENST00000623535 A0A0D9SG42 100 aa4.18□□□□□ -1.74
CDKL5-205ENST00000623535 MIR22HGQ0VDD5 57 aa4.18□□□□□ -1.74
CDKL5-205ENST00000623535 FAM229BQ4G0N7 80 aa4.17□□□□□ -1.74
CDKL5-205ENST00000623535 IGLV5-45A0A087WSX0 123 aa4.17□□□□□ -1.74
CDKL5-205ENST00000623535 KRTAP10-11P60412 298 aa4.17□□□□□ -1.74
CDKL5-205ENST00000623535 COL4A2P08572 1712 aa4.17□□□□□ -1.74
CDKL5-205ENST00000623535 TLX1NBP0CAT3 122 aa4.17□□□□□ -1.74
CDKL5-205ENST00000623535 A0A087WVE0 104 aa4.17□□□□□ -1.74
CDKL5-205ENST00000623535 ERC2-IT1O76042 136 aa4.17□□□□□ -1.74
CDKL5-205ENST00000623535 NOTCH1P46531 2555 aa4.17□□□□□ -1.74
CDKL5-205ENST00000623535 IGFL1Q6UW32 110 aa4.16□□□□□ -1.74
CDKL5-205ENST00000623535 S4R3F8 94 aa4.16□□□□□ -1.74
CDKL5-205ENST00000623535 R4GN34 69 aa4.16□□□□□ -1.74
CDKL5-205ENST00000623535 LCE6AA0A183 80 aa4.16□□□□□ -1.74
CDKL5-205ENST00000623535 CNBPP62633 177 aaKnown RBP4.16□□□□□ -1.74
CDKL5-205ENST00000623535 LOC110117498A0A087WWA1 95 aa4.15□□□□□ -1.74
CDKL5-205ENST00000623535 COX8CQ7Z4L0 72 aa4.14□□□□□ -1.75
CDKL5-205ENST00000623535 PRR15Q8IV56 129 aa4.14□□□□□ -1.75
CDKL5-205ENST00000623535 LINC00612Q8N6U2 182 aa4.13□□□□□ -1.75
CDKL5-205ENST00000623535 CR1P17927 2039 aa4.13□□□□□ -1.75
CDKL5-205ENST00000623535 FAM104AQ969W3 186 aa4.13□□□□□ -1.75
CDKL5-205ENST00000623535 KCNQ1DNQ9H478 68 aa4.13□□□□□ -1.75
CDKL5-205ENST00000623535 CYP4F30PQ9H0H9 118 aa4.13□□□□□ -1.75
CDKL5-205ENST00000623535 ADAMTSL4-AS1Q5T5F5 129 aa4.13□□□□□ -1.75
CDKL5-205ENST00000623535 PCSK5Q92824 1860 aa4.13□□□□□ -1.75
CDKL5-205ENST00000623535 C15orf56Q8N910 161 aa4.13□□□□□ -1.75
CDKL5-205ENST00000623535 SPRR4Q96PI1 79 aa4.13□□□□□ -1.75
CDKL5-205ENST00000623535 Q6ZPA2 131 aa4.12□□□□□ -1.75
CDKL5-205ENST00000623535 FAM168BA1KXE4 195 aa4.12□□□□□ -1.75
CDKL5-205ENST00000623535 TNP2Q05952 138 aa4.11□□□□□ -1.75
CDKL5-205ENST00000623535 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
CDKL5-205ENST00000623535 FP248Q71RG6 208 aaPredicted RBP4.1□□□□□ -1.75
CDKL5-205ENST00000623535 BPTFQ12830 3046 aa4.1□□□□□ -1.75
CDKL5-205ENST00000623535 PRR26Q8N8Z3 221 aa4.1□□□□□ -1.75
CDKL5-205ENST00000623535 COA5Q86WW8 74 aa4.1□□□□□ -1.75
CDKL5-205ENST00000623535 Q1T7F1 81 aa4.09□□□□□ -1.76
CDKL5-205ENST00000623535 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
CDKL5-205ENST00000623535 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.07□□□□□ -1.76
CDKL5-205ENST00000623535 Q8N1X5 172 aa4.07□□□□□ -1.76
CDKL5-205ENST00000623535 TSPEAR-AS2P59090 65 aa4.06□□□□□ -1.76
CDKL5-205ENST00000623535 LINC01546A6NGU7 62 aa4.06□□□□□ -1.76
CDKL5-205ENST00000623535 NBEAL1Q6ZS30 2694 aa4.06□□□□□ -1.76
CDKL5-205ENST00000623535 BAHCC1Q9P281 2608 aa4.06□□□□□ -1.76
CDKL5-205ENST00000623535 LCA10Q71F78 164 aa4.05□□□□□ -1.76
CDKL5-205ENST00000623535 PRR34Q9NV39 138 aa4.05□□□□□ -1.76
CDKL5-205ENST00000623535 H1FX-AS1Q4G0G2 97 aa4.05□□□□□ -1.76
CDKL5-205ENST00000623535 ITPR3Q14573 2671 aa4.05□□□□□ -1.76
CDKL5-205ENST00000623535 DMAC1Q96GE9 116 aa4.04□□□□□ -1.76
CDKL5-205ENST00000623535 GAS8-AS1O95177 125 aa4.04□□□□□ -1.76
CDKL5-205ENST00000623535 FLNAP21333 2647 aaKnown RBP4.03□□□□□ -1.76
CDKL5-205ENST00000623535 FAM218AQ96MZ4 157 aa4.03□□□□□ -1.76
CDKL5-205ENST00000623535 ANAPC11Q9NYG5 84 aa4.03□□□□□ -1.77
CDKL5-205ENST00000623535 A0A1B0GU33 70 aa4.02□□□□□ -1.77
CDKL5-205ENST00000623535 ZCCHC13Q8WW36 166 aaKnown RBP4.02□□□□□ -1.77
CDKL5-205ENST00000623535 STAB2Q8WWQ8 2551 aa4.02□□□□□ -1.77
CDKL5-205ENST00000623535 UNC79Q9P2D8 2635 aa4.01□□□□□ -1.77
CDKL5-205ENST00000623535 PRO0628Q9UI54 55 aa4□□□□□ -1.77
CDKL5-205ENST00000623535 M0QZ58 72 aa3.99□□□□□ -1.77
CDKL5-205ENST00000623535 CRIP3Q6Q6R5 217 aa3.99□□□□□ -1.77
CDKL5-205ENST00000623535 PLAC8Q9NZF1 115 aa3.98□□□□□ -1.77
CDKL5-205ENST00000623535 SPANXA2-OT1Q8N9U9 137 aa3.98□□□□□ -1.77
CDKL5-205ENST00000623535 A0A1W2PNN7 141 aa3.97□□□□□ -1.77
CDKL5-205ENST00000623535 TEP1Q99973 2627 aaKnown RBP3.97□□□□□ -1.77
CDKL5-205ENST00000623535 KRTAP21-3Q3LHN1 58 aa3.97□□□□□ -1.77
CDKL5-205ENST00000623535 TEX15Q9BXT5 2789 aa3.96□□□□□ -1.78
CDKL5-205ENST00000623535 C4orf26Q17RF5 130 aa3.95□□□□□ -1.78
CDKL5-205ENST00000623535 Q8N377 158 aa3.94□□□□□ -1.78
CDKL5-205ENST00000623535 A0A1W2PNM2 257 aa3.94□□□□□ -1.78
CDKL5-205ENST00000623535 AKAP13Q12802 2813 aa3.94□□□□□ -1.78
CDKL5-205ENST00000623535 CENPEQ02224 2701 aa3.93□□□□□ -1.78
CDKL5-205ENST00000623535 SPINK7P58062 85 aa3.93□□□□□ -1.78
CDKL5-205ENST00000623535 PRRC2CQ9Y520 2896 aaKnown RBP3.93□□□□□ -1.78
CDKL5-205ENST00000623535 KRTAP10-3P60369 221 aa3.92□□□□□ -1.78
CDKL5-205ENST00000623535 KMT2BQ9UMN6 2715 aaPredicted RBP3.9□□□□□ -1.78
CDKL5-205ENST00000623535 WIPF1O43516 503 aa3.9□□□□□ -1.78
CDKL5-205ENST00000623535 KLK9Q2XQG4 91 aa3.89□□□□□ -1.79
CDKL5-205ENST00000623535 A0A096LNT2 108 aa3.89□□□□□ -1.79
CDKL5-205ENST00000623535 GIG44P09565 113 aaPredicted RBP3.87□□□□□ -1.79
CDKL5-205ENST00000623535 COL6A5A8TX70 2615 aa3.86□□□□□ -1.79
CDKL5-205ENST00000623535 IGSF10Q6WRI0 2623 aa3.86□□□□□ -1.79
CDKL5-205ENST00000623535 RPL37P61927 97 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms