RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 WDFY3Q8IZQ1 3526 aa5.97□□□□□ -1.45
HDAC9-229ENST00000622668 UBE2V1Q13404 147 aa5.97□□□□□ -1.45
HDAC9-229ENST00000622668 FBN1P35555 2871 aaKnown RBP5.97□□□□□ -1.45
HDAC9-229ENST00000622668 PDZD2O15018 2839 aa5.97□□□□□ -1.45
HDAC9-229ENST00000622668 F8W1H4 67 aa5.97□□□□□ -1.45
HDAC9-229ENST00000622668 IGKV4-1P06312 121 aa5.96□□□□□ -1.46
HDAC9-229ENST00000622668 SCXQ7RTU7 201 aa5.96□□□□□ -1.46
HDAC9-229ENST00000622668 LIMD2Q9BT23 127 aa5.96□□□□□ -1.46
HDAC9-229ENST00000622668 IGKV3D-7A0A0C4DH55 119 aa5.95□□□□□ -1.46
HDAC9-229ENST00000622668 A0A1B0GX51 115 aa5.95□□□□□ -1.46
HDAC9-229ENST00000622668 H3BT86 120 aa5.95□□□□□ -1.46
HDAC9-229ENST00000622668 BCE1O60756 84 aa5.95□□□□□ -1.46
HDAC9-229ENST00000622668 WFDC2Q14508 124 aa5.95□□□□□ -1.46
HDAC9-229ENST00000622668 TGP01266 2768 aa5.95□□□□□ -1.46
HDAC9-229ENST00000622668 C21orf62-AS1Q17RA5 79 aa5.95□□□□□ -1.46
HDAC9-229ENST00000622668 IGLV5-45A0A087WSX0 123 aa5.94□□□□□ -1.46
HDAC9-229ENST00000622668 A0A087WSZ3 146 aa5.94□□□□□ -1.46
HDAC9-229ENST00000622668 SERTAD4-AS1Q5TG53 156 aa5.94□□□□□ -1.46
HDAC9-229ENST00000622668 CDIP1Q9H305 208 aa5.94□□□□□ -1.46
HDAC9-229ENST00000622668 Q6JHZ5 121 aa5.93□□□□□ -1.46
HDAC9-229ENST00000622668 NBPF19A0A087WUL8 3843 aa5.93□□□□□ -1.46
HDAC9-229ENST00000622668 CELSR1Q9NYQ6 3014 aa5.92□□□□□ -1.46
HDAC9-229ENST00000622668 KRTAP1-5Q9BYS1 174 aa5.91□□□□□ -1.46
HDAC9-229ENST00000622668 PSORS1C2Q9UIG4 136 aa5.91□□□□□ -1.46
HDAC9-229ENST00000622668 WFDC13Q8IUB5 93 aa5.91□□□□□ -1.46
HDAC9-229ENST00000622668 FAM236DA0A1B0GTK5 79 aa5.91□□□□□ -1.46
HDAC9-229ENST00000622668 FAM236CP0DP71 79 aa5.91□□□□□ -1.46
HDAC9-229ENST00000622668 CNBPP62633 177 aaKnown RBP5.91□□□□□ -1.46
HDAC9-229ENST00000622668 A0A1W2PNN7 141 aa5.9□□□□□ -1.47
HDAC9-229ENST00000622668 C3orf22Q8N5N4 141 aa5.9□□□□□ -1.47
HDAC9-229ENST00000622668 IGHV6-1A0A0B4J1U7 121 aa5.9□□□□□ -1.47
HDAC9-229ENST00000622668 ZNF861PO60384 105 aa5.9□□□□□ -1.47
HDAC9-229ENST00000622668 TEN1Q86WV5 123 aa5.9□□□□□ -1.47
HDAC9-229ENST00000622668 MP68P56378 58 aa5.89□□□□□ -1.47
HDAC9-229ENST00000622668 C2orf91Q6ZV80 131 aa5.89□□□□□ -1.47
HDAC9-229ENST00000622668 TAX1BP3O14907 124 aa5.89□□□□□ -1.47
HDAC9-229ENST00000622668 VPREB1P12018 145 aa5.88□□□□□ -1.47
HDAC9-229ENST00000622668 DEFB116Q30KQ4 102 aa5.88□□□□□ -1.47
HDAC9-229ENST00000622668 KIAA0087Q14695 138 aa5.88□□□□□ -1.47
HDAC9-229ENST00000622668 ANAPC11Q9NYG5 84 aa5.88□□□□□ -1.47
HDAC9-229ENST00000622668 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.88□□□□□ -1.47
HDAC9-229ENST00000622668 Q6ZRX8 168 aa5.88□□□□□ -1.47
HDAC9-229ENST00000622668 VWFP04275 2813 aa5.88□□□□□ -1.47
HDAC9-229ENST00000622668 Q6Q795 121 aa5.87□□□□□ -1.47
HDAC9-229ENST00000622668 LINC00575Q6W349 94 aa5.87□□□□□ -1.47
HDAC9-229ENST00000622668 IGLV7-43P04211 117 aa5.87□□□□□ -1.47
HDAC9-229ENST00000622668 ST20-AS1Q8NBB2 130 aa5.87□□□□□ -1.47
HDAC9-229ENST00000622668 SOSTDC1Q6X4U4 206 aa5.87□□□□□ -1.47
HDAC9-229ENST00000622668 KRTAP10-2P60368 255 aa5.86□□□□□ -1.47
HDAC9-229ENST00000622668 LINC00304Q8N9R0 145 aa5.86□□□□□ -1.47
HDAC9-229ENST00000622668 RETNLBQ9BQ08 111 aa5.86□□□□□ -1.47
HDAC9-229ENST00000622668 C9orf129Q5T035 196 aaKnown RBP5.86□□□□□ -1.47
HDAC9-229ENST00000622668 LINC01546A6NGU7 62 aa5.85□□□□□ -1.47
HDAC9-229ENST00000622668 ACYP1P07311 99 aa5.85□□□□□ -1.47
HDAC9-229ENST00000622668 Q5VSD8 79 aa5.85□□□□□ -1.47
HDAC9-229ENST00000622668 SDIM1Q6ZPB5 146 aa5.85□□□□□ -1.47
HDAC9-229ENST00000622668 Q8NBF4 154 aa5.85□□□□□ -1.47
HDAC9-229ENST00000622668 CASC2Q6XLA1 102 aa5.85□□□□□ -1.47
HDAC9-229ENST00000622668 FAM30AQ9NZY2 134 aa5.84□□□□□ -1.47
HDAC9-229ENST00000622668 IGLV1-50A0A075B6I6 118 aa5.83□□□□□ -1.48
HDAC9-229ENST00000622668 CHKB-CPT1BH3BT56 60 aa5.83□□□□□ -1.48
HDAC9-229ENST00000622668 KRTAP10-1P60331 282 aa5.83□□□□□ -1.48
HDAC9-229ENST00000622668 ANAPC13Q9BS18 74 aa5.82□□□□□ -1.48
HDAC9-229ENST00000622668 TLX1NBP0CAT3 122 aa5.82□□□□□ -1.48
HDAC9-229ENST00000622668 Q6ZR54 194 aa5.81□□□□□ -1.48
HDAC9-229ENST00000622668 ELOF1P60002 83 aaKnown RBP5.8□□□□□ -1.48
HDAC9-229ENST00000622668 COX6B2Q6YFQ2 88 aa5.8□□□□□ -1.48
HDAC9-229ENST00000622668 PRR26Q8N8Z3 221 aa5.79□□□□□ -1.48
HDAC9-229ENST00000622668 SPAG11AQ6PDA7 123 aa5.79□□□□□ -1.48
HDAC9-229ENST00000622668 ZFHX4Q86UP3 3567 aa5.78□□□□□ -1.48
HDAC9-229ENST00000622668 KCNQ1DNQ9H478 68 aa5.78□□□□□ -1.48
HDAC9-229ENST00000622668 SRRM2Q9UQ35 2752 aaKnown RBP5.78□□□□□ -1.48
HDAC9-229ENST00000622668 SSBP3-AS1Q7Z2R9 100 aa5.77□□□□□ -1.49
HDAC9-229ENST00000622668 CSMD2Q7Z408 3487 aa5.76□□□□□ -1.49
HDAC9-229ENST00000622668 CSMD1Q96PZ7 3565 aa5.76□□□□□ -1.49
HDAC9-229ENST00000622668 IGLV6-57P01721 117 aa5.76□□□□□ -1.49
HDAC9-229ENST00000622668 ATP11AUNQ6ZP68 121 aa5.75□□□□□ -1.49
HDAC9-229ENST00000622668 TRBV7-6A0A0J9YX20 115 aa5.75□□□□□ -1.49
HDAC9-229ENST00000622668 C9orf92A6NGG3 77 aa5.75□□□□□ -1.49
HDAC9-229ENST00000622668 Q6ZVQ6 151 aa5.75□□□□□ -1.49
HDAC9-229ENST00000622668 J3KT08 172 aa5.74□□□□□ -1.49
HDAC9-229ENST00000622668 LINC01547P58512 204 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-229ENST00000622668 EIF4EBP3O60516 100 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-229ENST00000622668 LINC00643Q86TS7 51 aa5.74□□□□□ -1.49
HDAC9-229ENST00000622668 B5MCH6 92 aa5.73□□□□□ -1.49
HDAC9-229ENST00000622668 Q96NJ1 140 aa5.73□□□□□ -1.49
HDAC9-229ENST00000622668 PLAC8Q9NZF1 115 aa5.73□□□□□ -1.49
HDAC9-229ENST00000622668 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
HDAC9-229ENST00000622668 IGKV2-30P06310 120 aa5.73□□□□□ -1.49
HDAC9-229ENST00000622668 PLA2G2DQ9UNK4 145 aa5.72□□□□□ -1.49
HDAC9-229ENST00000622668 SPRR4Q96PI1 79 aa5.72□□□□□ -1.49
HDAC9-229ENST00000622668 FAM236AA0A1B0GUQ0 79 aa5.71□□□□□ -1.5
HDAC9-229ENST00000622668 FAM236BA0A1B0GV22 79 aa5.71□□□□□ -1.5
HDAC9-229ENST00000622668 A0A0G2JQZ4 141 aa5.71□□□□□ -1.5
HDAC9-229ENST00000622668 ERC2-IT1O76042 136 aa5.7□□□□□ -1.5
HDAC9-229ENST00000622668 FAM218AQ96MZ4 157 aa5.7□□□□□ -1.5
HDAC9-229ENST00000622668 LITAFQ99732 161 aa5.7□□□□□ -1.5
HDAC9-229ENST00000622668 IGLV7-46A0A075B6I9 117 aa5.69□□□□□ -1.5
HDAC9-229ENST00000622668 LINC00313P59037 77 aa5.69□□□□□ -1.5
HDAC9-229ENST00000622668 ATP5EP2Q5VTU8 51 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms