RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 HIGD2AQ9BW72 106 aa8.72□□□□□ -1.01
CHD1L-210ENST00000622533 SPART-AS1P0CW21 52 aa8.72□□□□□ -1.01
CHD1L-210ENST00000622533 FUSP35637 526 aaKnown RBP eCLIP8.72□□□□□ -1.01
CHD1L-210ENST00000622533 PKD1L1Q8TDX9 2849 aa8.72□□□□□ -1.01
CHD1L-210ENST00000622533 SEC61GP60059 68 aa8.71□□□□□ -1.01
CHD1L-210ENST00000622533 DIRC1Q969H9 104 aa8.71□□□□□ -1.01
CHD1L-210ENST00000622533 DEFB4AO15263 64 aa8.7□□□□□ -1.02
CHD1L-210ENST00000622533 ESRGQ1W209 222 aa8.7□□□□□ -1.02
CHD1L-210ENST00000622533 IGKV4-1P06312 121 aa8.7□□□□□ -1.02
CHD1L-210ENST00000622533 Q8NAQ8 132 aa8.7□□□□□ -1.02
CHD1L-210ENST00000622533 Q6ZTC4 211 aa8.69□□□□□ -1.02
CHD1L-210ENST00000622533 KLK12Q9UKR0 248 aa8.69□□□□□ -1.02
CHD1L-210ENST00000622533 OCR1Q9BZK8 76 aa8.69□□□□□ -1.02
CHD1L-210ENST00000622533 CELA1Q9UNI1 258 aa8.68□□□□□ -1.02
CHD1L-210ENST00000622533 C3orf84H3BNL1 204 aa8.67□□□□□ -1.02
CHD1L-210ENST00000622533 ZNF73O43830 326 aaPredicted RBP8.67□□□□□ -1.02
CHD1L-210ENST00000622533 COX7BP24311 80 aa8.67□□□□□ -1.02
CHD1L-210ENST00000622533 C6orf48Q9UBA6 75 aa8.67□□□□□ -1.02
CHD1L-210ENST00000622533 ANK3Q12955 4377 aaKnown RBP8.66□□□□□ -1.02
CHD1L-210ENST00000622533 ERC2-IT1O76042 136 aa8.66□□□□□ -1.02
CHD1L-210ENST00000622533 HTN3P15516 51 aa8.66□□□□□ -1.02
CHD1L-210ENST00000622533 COL6A5A8TX70 2615 aa8.66□□□□□ -1.02
CHD1L-210ENST00000622533 ELOF1P60002 83 aaKnown RBP8.65□□□□□ -1.02
CHD1L-210ENST00000622533 FAM30AQ9NZY2 134 aa8.65□□□□□ -1.02
CHD1L-210ENST00000622533 J3QKU1 62 aa8.64□□□□□ -1.03
CHD1L-210ENST00000622533 EGFEM1PQ0D2K5 195 aa8.63□□□□□ -1.03
CHD1L-210ENST00000622533 M0R378 163 aa8.63□□□□□ -1.03
CHD1L-210ENST00000622533 CAMK2N2Q96S95 79 aa8.62□□□□□ -1.03
CHD1L-210ENST00000622533 H3BNG1 76 aa8.61□□□□□ -1.03
CHD1L-210ENST00000622533 VPREB1P12018 145 aa8.61□□□□□ -1.03
CHD1L-210ENST00000622533 SMIM29Q86T20 159 aa8.61□□□□□ -1.03
CHD1L-210ENST00000622533 DEFB105AQ8NG35 78 aa8.6□□□□□ -1.03
CHD1L-210ENST00000622533 PRB2P02812 416 aaPredicted RBP8.59□□□□□ -1.03
CHD1L-210ENST00000622533 hDV103S1A0JD37 113 aa8.59□□□□□ -1.03
CHD1L-210ENST00000622533 HIGD2BQ4VC39 106 aa8.59□□□□□ -1.03
CHD1L-210ENST00000622533 PSPHP1O15172 72 aa8.58□□□□□ -1.04
CHD1L-210ENST00000622533 Q6ZRP5 223 aa8.58□□□□□ -1.04
CHD1L-210ENST00000622533 PRR4Q16378 134 aa8.58□□□□□ -1.04
CHD1L-210ENST00000622533 C1orf64Q8NEQ6 169 aa8.57□□□□□ -1.04
CHD1L-210ENST00000622533 LINC00528Q8N1L1 170 aa8.57□□□□□ -1.04
CHD1L-210ENST00000622533 INAFM1C9JVW0 142 aa8.56□□□□□ -1.04
CHD1L-210ENST00000622533 Q6ZRU5 148 aa8.55□□□□□ -1.04
CHD1L-210ENST00000622533 KRTAP26-1Q6PEX3 210 aa8.54□□□□□ -1.04
CHD1L-210ENST00000622533 PMAIP1Q13794 54 aa8.53□□□□□ -1.04
CHD1L-210ENST00000622533 KPRPQ5T749 579 aaPredicted RBP8.53□□□□□ -1.04
CHD1L-210ENST00000622533 WFDC10BQ8IUB3 73 aa8.53□□□□□ -1.04
CHD1L-210ENST00000622533 PRR15Q8IV56 129 aa8.53□□□□□ -1.04
CHD1L-210ENST00000622533 MGAM2Q2M2H8 2515 aa8.53□□□□□ -1.04
CHD1L-210ENST00000622533 C15orf56Q8N910 161 aa8.53□□□□□ -1.04
CHD1L-210ENST00000622533 Q1T7F1 81 aa8.5□□□□□ -1.05
CHD1L-210ENST00000622533 A0A1B0GW54 56 aa8.5□□□□□ -1.05
CHD1L-210ENST00000622533 A8MU10 97 aa8.5□□□□□ -1.05
CHD1L-210ENST00000622533 Q8N377 158 aa8.5□□□□□ -1.05
CHD1L-210ENST00000622533 TRAV22A0A0B4J277 110 aa8.49□□□□□ -1.05
CHD1L-210ENST00000622533 NKAPP1Q8N9T2 125 aa8.49□□□□□ -1.05
CHD1L-210ENST00000622533 KCNQ1DNQ9H478 68 aa8.49□□□□□ -1.05
CHD1L-210ENST00000622533 BAHCC1Q9P281 2608 aa8.48□□□□□ -1.05
CHD1L-210ENST00000622533 SYCNQ0VAF6 134 aa8.48□□□□□ -1.05
CHD1L-210ENST00000622533 LINC01556Q5JQF7 62 aa8.48□□□□□ -1.05
CHD1L-210ENST00000622533 ST20-AS1Q8NBB2 130 aa8.48□□□□□ -1.05
CHD1L-210ENST00000622533 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.47□□□□□ -1.05
CHD1L-210ENST00000622533 A0A1W2PNM2 257 aa8.47□□□□□ -1.05
CHD1L-210ENST00000622533 LCE6AA0A183 80 aa8.46□□□□□ -1.06
CHD1L-210ENST00000622533 DHRS4-AS1Q9P1J3 65 aa8.46□□□□□ -1.06
CHD1L-210ENST00000622533 A8MUN3 132 aa8.46□□□□□ -1.06
CHD1L-210ENST00000622533 ZCCHC13Q8WW36 166 aaKnown RBP8.46□□□□□ -1.06
CHD1L-210ENST00000622533 IGKV2D-24A0A075B6R9 120 aa8.45□□□□□ -1.06
CHD1L-210ENST00000622533 K7EQZ3 153 aa8.45□□□□□ -1.06
CHD1L-210ENST00000622533 IGLV5-48A0A075B6I7 105 aa8.45□□□□□ -1.06
CHD1L-210ENST00000622533 PLA2G2DQ9UNK4 145 aa8.45□□□□□ -1.06
CHD1L-210ENST00000622533 TENM3Q9P273 2699 aa8.44□□□□□ -1.06
CHD1L-210ENST00000622533 ETDCA0A1B0GVM5 59 aa8.44□□□□□ -1.06
CHD1L-210ENST00000622533 TLX1NBP0CAT3 122 aa8.44□□□□□ -1.06
CHD1L-210ENST00000622533 DSCR10P59022 87 aa8.43□□□□□ -1.06
CHD1L-210ENST00000622533 ANK2Q01484 3957 aa8.43□□□□□ -1.06
CHD1L-210ENST00000622533 DEFB116Q30KQ4 102 aa8.43□□□□□ -1.06
CHD1L-210ENST00000622533 C7orf33Q8WU49 177 aa8.43□□□□□ -1.06
CHD1L-210ENST00000622533 PSCAO43653 123 aa8.42□□□□□ -1.06
CHD1L-210ENST00000622533 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
CHD1L-210ENST00000622533 IGLV5-37A0A075B6J1 123 aa8.4□□□□□ -1.06
CHD1L-210ENST00000622533 RETNQ9HD89 108 aa8.4□□□□□ -1.06
CHD1L-210ENST00000622533 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.06
CHD1L-210ENST00000622533 SERTAD4-AS1Q5TG53 156 aa8.4□□□□□ -1.06
CHD1L-210ENST00000622533 Q6ZRX8 168 aa8.4□□□□□ -1.06
CHD1L-210ENST00000622533 A0A0G2JQZ4 141 aa8.4□□□□□ -1.07
CHD1L-210ENST00000622533 A0A1W2PNN7 141 aa8.4□□□□□ -1.07
CHD1L-210ENST00000622533 DEFB131BA0A096LNP1 70 aa8.39□□□□□ -1.07
CHD1L-210ENST00000622533 DNAH10OSP0CZ25 163 aa8.39□□□□□ -1.07
CHD1L-210ENST00000622533 Q8NBF4 154 aa8.37□□□□□ -1.07
CHD1L-210ENST00000622533 Q9BRP9 147 aa8.37□□□□□ -1.07
CHD1L-210ENST00000622533 WFDC13Q8IUB5 93 aa8.37□□□□□ -1.07
CHD1L-210ENST00000622533 CYP4F30PQ9H0H9 118 aa8.37□□□□□ -1.07
CHD1L-210ENST00000622533 IGLV1-50A0A075B6I6 118 aa8.36□□□□□ -1.07
CHD1L-210ENST00000622533 SPRR1AP35321 89 aa8.36□□□□□ -1.07
CHD1L-210ENST00000622533 CSMD3Q7Z407 3707 aa8.36□□□□□ -1.07
CHD1L-210ENST00000622533 KRTAP4-16G5E9R7 235 aaPredicted RBP8.36□□□□□ -1.07
CHD1L-210ENST00000622533 Q5VV11 94 aa8.36□□□□□ -1.07
CHD1L-210ENST00000622533 C11orf45Q8TAV5 145 aa8.36□□□□□ -1.07
CHD1L-210ENST00000622533 TENM2Q9NT68 2774 aa8.36□□□□□ -1.07
CHD1L-210ENST00000622533 HCG22E2RYF7 251 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms