RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 GVQW2A0A096LPI5 108 aaPredicted RBP8.85□□□□□ -0.99
SIRPA-204ENST00000622179 VPREB1P12018 145 aa8.85□□□□□ -0.99
SIRPA-204ENST00000622179 TMEM258P61165 79 aa8.85□□□□□ -0.99
SIRPA-204ENST00000622179 HRCT1Q6UXD1 115 aa8.85□□□□□ -0.99
SIRPA-204ENST00000622179 Q6ZQT0 140 aa8.85□□□□□ -0.99
SIRPA-204ENST00000622179 PRYO14603 147 aa8.84□□□□□ -0.99
SIRPA-204ENST00000622179 FAM30AQ9NZY2 134 aa8.84□□□□□ -0.99
SIRPA-204ENST00000622179 DEFB116Q30KQ4 102 aa8.84□□□□□ -0.99
SIRPA-204ENST00000622179 TRAV7A0A075B6U4 112 aa8.83□□□□□ -1
SIRPA-204ENST00000622179 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
SIRPA-204ENST00000622179 FAM168BA1KXE4 195 aa8.82□□□□□ -1
SIRPA-204ENST00000622179 LRCOL1A6NCL2 159 aa8.81□□□□□ -1
SIRPA-204ENST00000622179 LY6G6CO95867 125 aa8.81□□□□□ -1
SIRPA-204ENST00000622179 C15orf56Q8N910 161 aa8.81□□□□□ -1
SIRPA-204ENST00000622179 NHLRC4P0CG21 123 aaPredicted RBP8.81□□□□□ -1
SIRPA-204ENST00000622179 DNAH10OSP0CZ25 163 aa8.8□□□□□ -1
SIRPA-204ENST00000622179 SERTAD4-AS1Q5TG53 156 aa8.8□□□□□ -1
SIRPA-204ENST00000622179 NUPR2A6NF83 97 aa8.8□□□□□ -1
SIRPA-204ENST00000622179 HIVEP1P15822 2718 aa8.8□□□□□ -1
SIRPA-204ENST00000622179 A0A087WSZ3 146 aa8.8□□□□□ -1
SIRPA-204ENST00000622179 PRR4Q16378 134 aa8.79□□□□□ -1
SIRPA-204ENST00000622179 ST20-AS1Q8NBB2 130 aa8.79□□□□□ -1
SIRPA-204ENST00000622179 Q9BRP9 147 aa8.79□□□□□ -1
SIRPA-204ENST00000622179 LINC00474Q9P2X8 69 aa8.78□□□□□ -1
SIRPA-204ENST00000622179 TRBV7-6A0A0J9YX20 115 aa8.78□□□□□ -1
SIRPA-204ENST00000622179 K7EIL1 84 aa8.77□□□□□ -1.01
SIRPA-204ENST00000622179 NSD1Q96L73 2696 aaPredicted RBP8.77□□□□□ -1.01
SIRPA-204ENST00000622179 SPENQ96T58 3664 aaKnown RBP8.77□□□□□ -1.01
SIRPA-204ENST00000622179 LOC110117498A0A087WWA1 95 aa8.77□□□□□ -1.01
SIRPA-204ENST00000622179 SPINK6Q6UWN8 80 aa8.76□□□□□ -1.01
SIRPA-204ENST00000622179 Q6ZRX8 168 aa8.76□□□□□ -1.01
SIRPA-204ENST00000622179 MPLKIPQ8TAP9 179 aa8.76□□□□□ -1.01
SIRPA-204ENST00000622179 CXCL6P80162 114 aa8.76□□□□□ -1.01
SIRPA-204ENST00000622179 MDFIQ99750 246 aa8.76□□□□□ -1.01
SIRPA-204ENST00000622179 CHTF8P0CG12 524 aa8.74□□□□□ -1.01
SIRPA-204ENST00000622179 NIPBLQ6KC79 2804 aaeCLIP8.74□□□□□ -1.01
SIRPA-204ENST00000622179 CASC10Q5T4H9 136 aa8.74□□□□□ -1.01
SIRPA-204ENST00000622179 NDUFC1O43677 76 aa8.73□□□□□ -1.01
SIRPA-204ENST00000622179 LINC00528Q8N1L1 170 aa8.73□□□□□ -1.01
SIRPA-204ENST00000622179 IGKV4-1P06312 121 aa8.72□□□□□ -1.01
SIRPA-204ENST00000622179 PHF5AQ7RTV0 110 aaKnown RBP8.72□□□□□ -1.01
SIRPA-204ENST00000622179 CRYGAP11844 174 aa8.72□□□□□ -1.01
SIRPA-204ENST00000622179 LINC01600Q96MT4 127 aa8.71□□□□□ -1.02
SIRPA-204ENST00000622179 TMEM254Q8TBM7 123 aa8.7□□□□□ -1.02
SIRPA-204ENST00000622179 Q8NDZ9 215 aa8.7□□□□□ -1.02
SIRPA-204ENST00000622179 KCNQ1DNQ9H478 68 aa8.7□□□□□ -1.02
SIRPA-204ENST00000622179 CUBNO60494 3623 aa8.69□□□□□ -1.02
SIRPA-204ENST00000622179 C4orf48Q5BLP8 95 aa8.68□□□□□ -1.02
SIRPA-204ENST00000622179 C5orf47Q569G3 176 aa8.68□□□□□ -1.02
SIRPA-204ENST00000622179 IGLV1-50A0A075B6I6 118 aa8.68□□□□□ -1.02
SIRPA-204ENST00000622179 IGLV5-52A0A0A0MRZ9 124 aa8.68□□□□□ -1.02
SIRPA-204ENST00000622179 C16orf90A8MZG2 172 aa8.67□□□□□ -1.02
SIRPA-204ENST00000622179 SMIM29Q86T20 159 aa8.67□□□□□ -1.02
SIRPA-204ENST00000622179 LINC00476Q8WZB0 136 aa8.67□□□□□ -1.02
SIRPA-204ENST00000622179 ZNF706Q9Y5V0 76 aaPredicted RBP8.67□□□□□ -1.02
SIRPA-204ENST00000622179 LINC00208Q96KT6 92 aa8.67□□□□□ -1.02
SIRPA-204ENST00000622179 Q8NBF4 154 aa8.66□□□□□ -1.02
SIRPA-204ENST00000622179 TM2D3Q9BRN9 247 aa8.66□□□□□ -1.02
SIRPA-204ENST00000622179 BAHCC1Q9P281 2608 aa8.66□□□□□ -1.02
SIRPA-204ENST00000622179 BSNQ9UPA5 3926 aa8.66□□□□□ -1.02
SIRPA-204ENST00000622179 NBDYA0A0U1RRE5 68 aa8.65□□□□□ -1.02
SIRPA-204ENST00000622179 Q8N377 158 aa8.65□□□□□ -1.03
SIRPA-204ENST00000622179 BRK1Q8WUW1 75 aa8.65□□□□□ -1.03
SIRPA-204ENST00000622179 EPM2AB3EWF7 344 aa8.64□□□□□ -1.03
SIRPA-204ENST00000622179 WIPF1O43516 503 aa8.64□□□□□ -1.03
SIRPA-204ENST00000622179 A0A0G2JQZ4 141 aa8.63□□□□□ -1.03
SIRPA-204ENST00000622179 A0A1W2PNN7 141 aa8.63□□□□□ -1.03
SIRPA-204ENST00000622179 C1orf134Q5TEV5 83 aa8.63□□□□□ -1.03
SIRPA-204ENST00000622179 CASC2Q6XLA1 102 aa8.63□□□□□ -1.03
SIRPA-204ENST00000622179 OBSCN-AS1Q96MR7 158 aa8.63□□□□□ -1.03
SIRPA-204ENST00000622179 HCG22E2RYF7 251 aa8.63□□□□□ -1.03
SIRPA-204ENST00000622179 TRBV7-4A0A0J9YYF1 115 aa8.63□□□□□ -1.03
SIRPA-204ENST00000622179 CIRBP-AS1Q8TBR5 109 aa8.62□□□□□ -1.03
SIRPA-204ENST00000622179 ATP5EP56381 51 aaPredicted RBP8.62□□□□□ -1.03
SIRPA-204ENST00000622179 SERP1Q9Y6X1 66 aa8.61□□□□□ -1.03
SIRPA-204ENST00000622179 IGHV6-1A0A0B4J1U7 121 aa8.61□□□□□ -1.03
SIRPA-204ENST00000622179 ERC2-IT1O76042 136 aa8.59□□□□□ -1.03
SIRPA-204ENST00000622179 SMIM26A0A096LP01 95 aa8.58□□□□□ -1.04
SIRPA-204ENST00000622179 TLX1NBP0CAT3 122 aa8.58□□□□□ -1.04
SIRPA-204ENST00000622179 RPL37AP61513 92 aaKnown RBP8.58□□□□□ -1.04
SIRPA-204ENST00000622179 CHKB-CPT1BH3BT56 60 aa8.57□□□□□ -1.04
SIRPA-204ENST00000622179 BCE1O60756 84 aa8.56□□□□□ -1.04
SIRPA-204ENST00000622179 A0A1B0GW54 56 aa8.54□□□□□ -1.04
SIRPA-204ENST00000622179 K7EQZ3 153 aa8.54□□□□□ -1.04
SIRPA-204ENST00000622179 MOBPQ13875 183 aa8.54□□□□□ -1.04
SIRPA-204ENST00000622179 H0Y9P7 68 aa8.54□□□□□ -1.04
SIRPA-204ENST00000622179 RTL8CO15255 209 aa8.53□□□□□ -1.04
SIRPA-204ENST00000622179 CSMD2Q7Z408 3487 aa8.53□□□□□ -1.04
SIRPA-204ENST00000622179 PCOTHQ58A44 107 aa8.53□□□□□ -1.04
SIRPA-204ENST00000622179 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
SIRPA-204ENST00000622179 IGFL1Q6UW32 110 aa8.52□□□□□ -1.05
SIRPA-204ENST00000622179 KMT2BQ9UMN6 2715 aaPredicted RBP8.52□□□□□ -1.05
SIRPA-204ENST00000622179 TENM4Q6N022 2769 aa8.52□□□□□ -1.05
SIRPA-204ENST00000622179 A0A0U1RQV1 116 aa8.52□□□□□ -1.05
SIRPA-204ENST00000622179 A0A1W2PNM2 257 aa8.51□□□□□ -1.05
SIRPA-204ENST00000622179 APLNQ9ULZ1 77 aa8.5□□□□□ -1.05
SIRPA-204ENST00000622179 C9orf163Q8N9P6 203 aa8.49□□□□□ -1.05
SIRPA-204ENST00000622179 RPS28P62857 69 aaKnown RBP8.48□□□□□ -1.05
SIRPA-204ENST00000622179 KRTAP26-1Q6PEX3 210 aa8.48□□□□□ -1.05
SIRPA-204ENST00000622179 STAB2Q8WWQ8 2551 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms