RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, human

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-222	ENST00000621967	LINC00588	Q9Y4M8	146 aa		11.47	□□□□□ -0.57
FAM3A-222	ENST00000621967	NDUFC2-KCTD14	E9PQ53	114 aa		11.47	□□□□□ -0.57
FAM3A-222	ENST00000621967	LAMTOR3	Q9UHA4	124 aa		11.47	□□□□□ -0.57
FAM3A-222	ENST00000621967	COX7B	P24311	80 aa		11.46	□□□□□ -0.58
FAM3A-222	ENST00000621967	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	11.46	□□□□□ -0.58
FAM3A-222	ENST00000621967		F8WDY8	70 aa		11.45	□□□□□ -0.58
FAM3A-222	ENST00000621967		M0R378	163 aa		11.45	□□□□□ -0.58
FAM3A-222	ENST00000621967	UBL5	Q9BZL1	73 aa		11.45	□□□□□ -0.58
FAM3A-222	ENST00000621967	USP17L23	D6RBM5	183 aa		11.45	□□□□□ -0.58
FAM3A-222	ENST00000621967	C1orf43	Q9BWL3	253 aa		11.45	□□□□□ -0.58
FAM3A-222	ENST00000621967	CRYGA	P11844	174 aa		11.44	□□□□□ -0.58
FAM3A-222	ENST00000621967	PDE6G	P18545	87 aa		11.43	□□□□□ -0.58
FAM3A-222	ENST00000621967	UPK3B	Q9BT76	320 aa		11.43	□□□□□ -0.58
FAM3A-222	ENST00000621967	SERP2	Q8N6R1	65 aa		11.42	□□□□□ -0.58
FAM3A-222	ENST00000621967	DSCR8	Q96T75	97 aa		11.42	□□□□□ -0.58
FAM3A-222	ENST00000621967		M0R2N4	97 aa		11.41	□□□□□ -0.58
FAM3A-222	ENST00000621967	GHRH	P01286	108 aa		11.41	□□□□□ -0.58
FAM3A-222	ENST00000621967		Q6ZRP5	223 aa		11.4	□□□□□ -0.58
FAM3A-222	ENST00000621967	LINC00528	Q8N1L1	170 aa		11.4	□□□□□ -0.58
FAM3A-222	ENST00000621967	IGKV2D-24	A0A075B6R9	120 aa		11.39	□□□□□ -0.59
FAM3A-222	ENST00000621967	TRBV7-4	A0A0J9YYF1	115 aa		11.39	□□□□□ -0.59
FAM3A-222	ENST00000621967	LY6G6C	O95867	125 aa		11.39	□□□□□ -0.59
FAM3A-222	ENST00000621967	DNAH10OS	P0CZ25	163 aa		11.39	□□□□□ -0.59
FAM3A-222	ENST00000621967	VPS13D	Q5THJ4	4388 aa		11.38	□□□□□ -0.59
FAM3A-222	ENST00000621967	FAM19A1	Q7Z5A9	133 aa		11.38	□□□□□ -0.59
FAM3A-222	ENST00000621967	LINC00476	Q8WZB0	136 aa		11.38	□□□□□ -0.59
FAM3A-222	ENST00000621967	SYCN	Q0VAF6	134 aa		11.37	□□□□□ -0.59
FAM3A-222	ENST00000621967	ALMS1	Q8TCU4	4167 aa		11.37	□□□□□ -0.59
FAM3A-222	ENST00000621967	DNAH1	Q9P2D7	4330 aa		11.37	□□□□□ -0.59
FAM3A-222	ENST00000621967		Q6ZVQ6	151 aa		11.35	□□□□□ -0.59
FAM3A-222	ENST00000621967	SMIM20	Q8N5G0	67 aa		11.35	□□□□□ -0.59
FAM3A-222	ENST00000621967	LINC01547	P58512	204 aa	Predicted RBP	11.33	□□□□□ -0.6
FAM3A-222	ENST00000621967	TLX1NB	P0CAT3	122 aa		11.32	□□□□□ -0.6
FAM3A-222	ENST00000621967	KCNQ1DN	Q9H478	68 aa		11.32	□□□□□ -0.6
FAM3A-222	ENST00000621967	CYSTM1	Q9H1C7	97 aa		11.31	□□□□□ -0.6
FAM3A-222	ENST00000621967	CXCL6	P80162	114 aa		11.31	□□□□□ -0.6
FAM3A-222	ENST00000621967	SERTAD4-AS1	Q5TG53	156 aa		11.29	□□□□□ -0.6
FAM3A-222	ENST00000621967	PLA2G2D	Q9UNK4	145 aa		11.29	□□□□□ -0.6
FAM3A-222	ENST00000621967	NBDY	A0A0U1RRE5	68 aa		11.29	□□□□□ -0.6
FAM3A-222	ENST00000621967	BCE1	O60756	84 aa		11.28	□□□□□ -0.6
FAM3A-222	ENST00000621967	NKAPP1	Q8N9T2	125 aa		11.28	□□□□□ -0.6
FAM3A-222	ENST00000621967	C7orf33	Q8WU49	177 aa		11.28	□□□□□ -0.6
FAM3A-222	ENST00000621967	KMT2A	Q03164	3969 aa		11.28	□□□□□ -0.6
FAM3A-222	ENST00000621967	HAMP	P81172	84 aa		11.27	□□□□□ -0.6
FAM3A-222	ENST00000621967	SACS	Q9NZJ4	4579 aa		11.27	□□□□□ -0.61
FAM3A-222	ENST00000621967	LCE6A	A0A183	80 aa		11.26	□□□□□ -0.61
FAM3A-222	ENST00000621967	KRTAP1-5	Q9BYS1	174 aa		11.26	□□□□□ -0.61
FAM3A-222	ENST00000621967	IGLV5-37	A0A075B6J1	123 aa		11.25	□□□□□ -0.61
FAM3A-222	ENST00000621967	TMEM258	P61165	79 aa		11.24	□□□□□ -0.61
FAM3A-222	ENST00000621967	RMI2	Q96E14	147 aa		11.24	□□□□□ -0.61
FAM3A-222	ENST00000621967	DNAH6	Q9C0G6	4158 aa		11.24	□□□□□ -0.61
FAM3A-222	ENST00000621967	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.21	□□□□□ -0.61
FAM3A-222	ENST00000621967	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.21	□□□□□ -0.61
FAM3A-222	ENST00000621967	HYDIN	Q4G0P3	5121 aa		11.21	□□□□□ -0.62
FAM3A-222	ENST00000621967	PRY	O14603	147 aa		11.2	□□□□□ -0.62
FAM3A-222	ENST00000621967	SPRR1A	P35321	89 aa		11.2	□□□□□ -0.62
FAM3A-222	ENST00000621967		Q6ZR54	194 aa		11.2	□□□□□ -0.62
FAM3A-222	ENST00000621967	IGLV1-50	A0A075B6I6	118 aa		11.19	□□□□□ -0.62
FAM3A-222	ENST00000621967		Q8N377	158 aa		11.19	□□□□□ -0.62
FAM3A-222	ENST00000621967	TRAV7	A0A075B6U4	112 aa		11.19	□□□□□ -0.62
FAM3A-222	ENST00000621967		Q6ZRX8	168 aa		11.19	□□□□□ -0.62
FAM3A-222	ENST00000621967	DHRS4-AS1	Q9P1J3	65 aa		11.19	□□□□□ -0.62
FAM3A-222	ENST00000621967	KRTAP7-1	Q8IUC3	87 aa		11.18	□□□□□ -0.62
FAM3A-222	ENST00000621967	SVIP	Q8NHG7	77 aa		11.18	□□□□□ -0.62
FAM3A-222	ENST00000621967	IGLV5-48	A0A075B6I7	105 aa		11.17	□□□□□ -0.62
FAM3A-222	ENST00000621967	FAM168B	A1KXE4	195 aa		11.17	□□□□□ -0.62
FAM3A-222	ENST00000621967		J3KT08	172 aa		11.17	□□□□□ -0.62
FAM3A-222	ENST00000621967	RPS28	P62857	69 aa	Known RBP	11.17	□□□□□ -0.62
FAM3A-222	ENST00000621967	DNAH2	Q9P225	4427 aa		11.16	□□□□□ -0.62
FAM3A-222	ENST00000621967		Q9BRP9	147 aa		11.16	□□□□□ -0.62
FAM3A-222	ENST00000621967	SCX	Q7RTU7	201 aa		11.15	□□□□□ -0.62
FAM3A-222	ENST00000621967	DNAH10	Q8IVF4	4471 aa		11.15	□□□□□ -0.62
FAM3A-222	ENST00000621967	RPL37AP8	A6NKH3	93 aa		11.15	□□□□□ -0.62
FAM3A-222	ENST00000621967	C1orf134	Q5TEV5	83 aa		11.15	□□□□□ -0.62
FAM3A-222	ENST00000621967	LOC107984640	A0A0U1RRK4	108 aa		11.14	□□□□□ -0.63
FAM3A-222	ENST00000621967	PSCA	O43653	123 aa		11.14	□□□□□ -0.63
FAM3A-222	ENST00000621967	C20orf197	Q8N268	126 aa		11.13	□□□□□ -0.63
FAM3A-222	ENST00000621967	RYR2	Q92736	4967 aa		11.13	□□□□□ -0.63
FAM3A-222	ENST00000621967	DEFB105A	Q8NG35	78 aa		11.13	□□□□□ -0.63
FAM3A-222	ENST00000621967	ETDC	A0A1B0GVM5	59 aa		11.12	□□□□□ -0.63
FAM3A-222	ENST00000621967	DPH3	Q96FX2	82 aa		11.12	□□□□□ -0.63
FAM3A-222	ENST00000621967	TNP2	Q05952	138 aa		11.11	□□□□□ -0.63
FAM3A-222	ENST00000621967	MRPL55	Q7Z7F7	128 aa	Known RBP	11.11	□□□□□ -0.63
FAM3A-222	ENST00000621967		A0A1B0GW54	56 aa		11.09	□□□□□ -0.63
FAM3A-222	ENST00000621967	NREP	Q16612	68 aa		11.09	□□□□□ -0.63
FAM3A-222	ENST00000621967	KLKP1	Q107X0	134 aa		11.09	□□□□□ -0.63
FAM3A-222	ENST00000621967		Q6ZRN7	208 aa	Predicted RBP	11.09	□□□□□ -0.63
FAM3A-222	ENST00000621967	IGKV4-1	P06312	121 aa		11.08	□□□□□ -0.64
FAM3A-222	ENST00000621967	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.08	□□□□□ -0.64
FAM3A-222	ENST00000621967	ST20-AS1	Q8NBB2	130 aa		11.06	□□□□□ -0.64
FAM3A-222	ENST00000621967	FRAS1	Q86XX4	4008 aa		11.05	□□□□□ -0.64
FAM3A-222	ENST00000621967		A0A1W2PNM2	257 aa		11.05	□□□□□ -0.64
FAM3A-222	ENST00000621967		H7BZZ5	65 aa		11.05	□□□□□ -0.64
FAM3A-222	ENST00000621967	FUS	P35637	526 aa	Known RBP eCLIP	11.05	□□□□□ -0.64
FAM3A-222	ENST00000621967	ERC2-IT1	O76042	136 aa		11.04	□□□□□ -0.64
FAM3A-222	ENST00000621967	DNAH17	Q9UFH2	4485 aa		11.04	□□□□□ -0.64
FAM3A-222	ENST00000621967	BPY2	O14599	106 aa		11.03	□□□□□ -0.64
FAM3A-222	ENST00000621967	RTL8C	O15255	209 aa		11.03	□□□□□ -0.64
FAM3A-222	ENST00000621967		Q8N9L7	120 aa		11.03	□□□□□ -0.64
FAM3A-222	ENST00000621967	C1orf137	Q5JT78	98 aa		11.03	□□□□□ -0.64

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