RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ETDCA0A1B0GVM5 59 aa6.75□□□□□ -1.33
VPS11-208ENST00000621676 hADV29S1A0JD25 119 aa6.75□□□□□ -1.33
VPS11-208ENST00000621676 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
VPS11-208ENST00000621676 ERC2-IT1O76042 136 aa6.74□□□□□ -1.33
VPS11-208ENST00000621676 COX7BP24311 80 aa6.73□□□□□ -1.33
VPS11-208ENST00000621676 Q8N814 137 aa6.73□□□□□ -1.33
VPS11-208ENST00000621676 SS18L2Q9UHA2 77 aa6.73□□□□□ -1.33
VPS11-208ENST00000621676 C2orf48Q96LS8 159 aa6.73□□□□□ -1.33
VPS11-208ENST00000621676 UPK3BQ9BT76 320 aa6.73□□□□□ -1.33
VPS11-208ENST00000621676 M0R378 163 aa6.73□□□□□ -1.33
VPS11-208ENST00000621676 KRTAP10-2P60368 255 aa6.73□□□□□ -1.33
VPS11-208ENST00000621676 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.73□□□□□ -1.33
VPS11-208ENST00000621676 SCXQ7RTU7 201 aa6.73□□□□□ -1.33
VPS11-208ENST00000621676 MRPL55Q7Z7F7 128 aaKnown RBP6.73□□□□□ -1.33
VPS11-208ENST00000621676 ORMDL1Q9P0S3 153 aa6.72□□□□□ -1.33
VPS11-208ENST00000621676 IGLV5-52A0A0A0MRZ9 124 aa6.72□□□□□ -1.33
VPS11-208ENST00000621676 LOC107984640A0A0U1RRK4 108 aa6.72□□□□□ -1.33
VPS11-208ENST00000621676 KMT2CQ8NEZ4 4911 aaKnown RBP6.72□□□□□ -1.33
VPS11-208ENST00000621676 A0A087WTM6 91 aa6.71□□□□□ -1.33
VPS11-208ENST00000621676 IGKV3D-7A0A0C4DH55 119 aa6.71□□□□□ -1.34
VPS11-208ENST00000621676 B5MCH6 92 aa6.71□□□□□ -1.34
VPS11-208ENST00000621676 RTL8CO15255 209 aa6.7□□□□□ -1.34
VPS11-208ENST00000621676 DNAH6Q9C0G6 4158 aa6.7□□□□□ -1.34
VPS11-208ENST00000621676 C3orf84H3BNL1 204 aa6.7□□□□□ -1.34
VPS11-208ENST00000621676 SMR3BP02814 79 aaPredicted RBP6.7□□□□□ -1.34
VPS11-208ENST00000621676 HRCT1Q6UXD1 115 aa6.7□□□□□ -1.34
VPS11-208ENST00000621676 LINC00476Q8WZB0 136 aa6.7□□□□□ -1.34
VPS11-208ENST00000621676 DNAH2Q9P225 4427 aa6.7□□□□□ -1.34
VPS11-208ENST00000621676 H0YGX0 51 aa6.7□□□□□ -1.34
VPS11-208ENST00000621676 IGLV6-57P01721 117 aa6.69□□□□□ -1.34
VPS11-208ENST00000621676 DEFB116Q30KQ4 102 aa6.69□□□□□ -1.34
VPS11-208ENST00000621676 LINC00575Q6W349 94 aa6.69□□□□□ -1.34
VPS11-208ENST00000621676 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
VPS11-208ENST00000621676 LINC01561Q8N1V8 128 aa6.69□□□□□ -1.34
VPS11-208ENST00000621676 DNAH11Q96DT5 4516 aa6.69□□□□□ -1.34
VPS11-208ENST00000621676 SNCGO76070 127 aa6.68□□□□□ -1.34
VPS11-208ENST00000621676 NDUFC2O95298 119 aa6.68□□□□□ -1.34
VPS11-208ENST00000621676 UBE2AP49459 152 aa6.67□□□□□ -1.34
VPS11-208ENST00000621676 NDUFV3P56181 108 aaKnown RBP6.67□□□□□ -1.34
VPS11-208ENST00000621676 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
VPS11-208ENST00000621676 CCDC179H3BU77 68 aa6.66□□□□□ -1.34
VPS11-208ENST00000621676 SDIM1Q6ZPB5 146 aa6.66□□□□□ -1.34
VPS11-208ENST00000621676 TRACP01848 142 aa6.65□□□□□ -1.34
VPS11-208ENST00000621676 Q9BRP9 147 aa6.65□□□□□ -1.34
VPS11-208ENST00000621676 C9orf163Q8N9P6 203 aa6.65□□□□□ -1.35
VPS11-208ENST00000621676 DMBT1Q9UGM3 2413 aaPredicted RBP6.65□□□□□ -1.35
VPS11-208ENST00000621676 IGLV9-49A0A0B4J1Y8 123 aa6.65□□□□□ -1.35
VPS11-208ENST00000621676 C16orf90A8MZG2 172 aa6.64□□□□□ -1.35
VPS11-208ENST00000621676 H3BT86 120 aa6.64□□□□□ -1.35
VPS11-208ENST00000621676 HIST1H4AP62805 103 aaKnown RBP6.64□□□□□ -1.35
VPS11-208ENST00000621676 REG3GQ6UW15 175 aa6.64□□□□□ -1.35
VPS11-208ENST00000621676 IGLV1-50A0A075B6I6 118 aa6.63□□□□□ -1.35
VPS11-208ENST00000621676 C1orf137Q5JT78 98 aa6.63□□□□□ -1.35
VPS11-208ENST00000621676 A0A087WVE0 104 aa6.63□□□□□ -1.35
VPS11-208ENST00000621676 Q8N9L7 120 aa6.63□□□□□ -1.35
VPS11-208ENST00000621676 RBM3P98179 157 aaKnown RBP6.62□□□□□ -1.35
VPS11-208ENST00000621676 LINC00846Q9NV44 126 aa6.62□□□□□ -1.35
VPS11-208ENST00000621676 KRTAP21-3Q3LHN1 58 aa6.62□□□□□ -1.35
VPS11-208ENST00000621676 PKHD1P08F94 4074 aa6.62□□□□□ -1.35
VPS11-208ENST00000621676 EPM2AB3EWF7 344 aa6.61□□□□□ -1.35
VPS11-208ENST00000621676 SMCR5Q8TEV8 140 aa6.61□□□□□ -1.35
VPS11-208ENST00000621676 ELOF1P60002 83 aaKnown RBP6.61□□□□□ -1.35
VPS11-208ENST00000621676 DSCR8Q96T75 97 aa6.61□□□□□ -1.35
VPS11-208ENST00000621676 TMEM256-PLSCR3K7ERE1 68 aa6.6□□□□□ -1.35
VPS11-208ENST00000621676 C14orf177Q52M58 125 aa6.6□□□□□ -1.35
VPS11-208ENST00000621676 LINC01600Q96MT4 127 aa6.6□□□□□ -1.35
VPS11-208ENST00000621676 CCKP06307 115 aa6.6□□□□□ -1.35
VPS11-208ENST00000621676 Q6Q795 121 aa6.6□□□□□ -1.35
VPS11-208ENST00000621676 Q6ZR54 194 aa6.6□□□□□ -1.35
VPS11-208ENST00000621676 LINC00528Q8N1L1 170 aa6.6□□□□□ -1.35
VPS11-208ENST00000621676 Q6ZRX8 168 aa6.58□□□□□ -1.36
VPS11-208ENST00000621676 Q8N377 158 aa6.58□□□□□ -1.36
VPS11-208ENST00000621676 SMIM20Q8N5G0 67 aa6.58□□□□□ -1.36
VPS11-208ENST00000621676 KCNQ1DNQ9H478 68 aa6.57□□□□□ -1.36
VPS11-208ENST00000621676 KRTAP10-1P60331 282 aa6.57□□□□□ -1.36
VPS11-208ENST00000621676 CIRBP-AS1Q8TBR5 109 aa6.57□□□□□ -1.36
VPS11-208ENST00000621676 CNBPP62633 177 aaKnown RBP6.56□□□□□ -1.36
VPS11-208ENST00000621676 PSORS1C2Q9UIG4 136 aa6.56□□□□□ -1.36
VPS11-208ENST00000621676 C9orf153Q5TBE3 101 aa6.56□□□□□ -1.36
VPS11-208ENST00000621676 FAT1Q14517 4588 aa6.55□□□□□ -1.36
VPS11-208ENST00000621676 INAFM2P0DMQ5 153 aa6.54□□□□□ -1.36
VPS11-208ENST00000621676 TLX1NBP0CAT3 122 aa6.54□□□□□ -1.36
VPS11-208ENST00000621676 FAM240AA0A1B0GVK7 77 aa6.53□□□□□ -1.36
VPS11-208ENST00000621676 LRP1BQ9NZR2 4599 aa6.52□□□□□ -1.37
VPS11-208ENST00000621676 TRBV7-7A0A0K0K1E9 115 aa6.51□□□□□ -1.37
VPS11-208ENST00000621676 DNAH17Q9UFH2 4485 aa6.51□□□□□ -1.37
VPS11-208ENST00000621676 F8WEM9 126 aa6.51□□□□□ -1.37
VPS11-208ENST00000621676 DNAH8Q96JB1 4490 aa6.51□□□□□ -1.37
VPS11-208ENST00000621676 FAM236AA0A1B0GUQ0 79 aa6.51□□□□□ -1.37
VPS11-208ENST00000621676 FAM236BA0A1B0GV22 79 aa6.51□□□□□ -1.37
VPS11-208ENST00000621676 DYNC2H1Q8NCM8 4307 aaKnown RBP6.51□□□□□ -1.37
VPS11-208ENST00000621676 SPACA4Q8TDM5 124 aa6.5□□□□□ -1.37
VPS11-208ENST00000621676 HECTD4Q9Y4D8 3996 aa6.5□□□□□ -1.37
VPS11-208ENST00000621676 SACSQ9NZJ4 4579 aa6.5□□□□□ -1.37
VPS11-208ENST00000621676 SPINK6Q6UWN8 80 aa6.5□□□□□ -1.37
VPS11-208ENST00000621676 A0A087WSZ3 146 aa6.49□□□□□ -1.37
VPS11-208ENST00000621676 JMJD7-PLA2G4BH0Y9G9 81 aa6.49□□□□□ -1.37
VPS11-208ENST00000621676 PRYO14603 147 aa6.49□□□□□ -1.37
VPS11-208ENST00000621676 RPL37AP61513 92 aaKnown RBP6.48□□□□□ -1.37
VPS11-208ENST00000621676 KRTAP4-16G5E9R7 235 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms