RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 EIF4EBP3O60516 100 aaPredicted RBP13.55□□□□□ -0.24
ATXN3-253ENST00000621269 KRTAP13-3Q3SY46 172 aa13.55□□□□□ -0.24
ATXN3-253ENST00000621269 HINT1P49773 126 aaPredicted RBP13.54□□□□□ -0.24
ATXN3-253ENST00000621269 RPS29P62273 56 aaKnown RBP13.54□□□□□ -0.24
ATXN3-253ENST00000621269 MUC17Q685J3 4493 aa13.53□□□□□ -0.24
ATXN3-253ENST00000621269 LCE2AQ5TA79 106 aaPredicted RBP13.51□□□□□ -0.25
ATXN3-253ENST00000621269 C9orf153Q5TBE3 101 aa13.51□□□□□ -0.25
ATXN3-253ENST00000621269 SLC25A20O43772 301 aa13.5□□□□□ -0.25
ATXN3-253ENST00000621269 Q8N377 158 aa13.5□□□□□ -0.25
ATXN3-253ENST00000621269 OR13C6PQ8NH95 151 aa13.5□□□□□ -0.25
ATXN3-253ENST00000621269 SPANXCQ9NY87 97 aa13.5□□□□□ -0.25
ATXN3-253ENST00000621269 HIST1H2BKO60814 126 aa13.49□□□□□ -0.25
ATXN3-253ENST00000621269 HIST1H2BJP06899 126 aa13.49□□□□□ -0.25
ATXN3-253ENST00000621269 HIST1H2BOP23527 126 aa13.49□□□□□ -0.25
ATXN3-253ENST00000621269 HIST1H2BBP33778 126 aa13.49□□□□□ -0.25
ATXN3-253ENST00000621269 HIST1H2BDP58876 126 aa13.49□□□□□ -0.25
ATXN3-253ENST00000621269 HIST1H2BCP62807 126 aa13.49□□□□□ -0.25
ATXN3-253ENST00000621269 HIST2H2BEQ16778 126 aa13.49□□□□□ -0.25
ATXN3-253ENST00000621269 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.49□□□□□ -0.25
ATXN3-253ENST00000621269 LINC00308Q8TCZ7 52 aa13.49□□□□□ -0.25
ATXN3-253ENST00000621269 HIST1H2BHQ93079 126 aa13.49□□□□□ -0.25
ATXN3-253ENST00000621269 HIST1H2BNQ99877 126 aa13.49□□□□□ -0.25
ATXN3-253ENST00000621269 HIST1H2BMQ99879 126 aa13.49□□□□□ -0.25
ATXN3-253ENST00000621269 FAT4Q6V0I7 4981 aa13.49□□□□□ -0.25
ATXN3-253ENST00000621269 C5orf52A6NGY3 159 aa13.48□□□□□ -0.25
ATXN3-253ENST00000621269 ST20-AS1Q8NBB2 130 aa13.48□□□□□ -0.25
ATXN3-253ENST00000621269 TIMM17BO60830 172 aa13.47□□□□□ -0.25
ATXN3-253ENST00000621269 LINC01545Q5VT33 79 aa13.47□□□□□ -0.25
ATXN3-253ENST00000621269 PET117Q6UWS5 81 aa13.47□□□□□ -0.25
ATXN3-253ENST00000621269 LITAFQ99732 161 aa13.47□□□□□ -0.25
ATXN3-253ENST00000621269 ZNF815PA8K554 130 aa13.45□□□□□ -0.26
ATXN3-253ENST00000621269 ASB16-AS1Q495Z4 193 aa13.44□□□□□ -0.26
ATXN3-253ENST00000621269 SPANXDQ9BXN6 97 aa13.42□□□□□ -0.26
ATXN3-253ENST00000621269 DHRS4-AS1Q9P1J3 65 aa13.42□□□□□ -0.26
ATXN3-253ENST00000621269 SEC61BP60468 96 aaKnown RBP13.41□□□□□ -0.26
ATXN3-253ENST00000621269 SLC25A34Q6PIV7 304 aa13.4□□□□□ -0.26
ATXN3-253ENST00000621269 LINC00518Q8N0U6 118 aa13.39□□□□□ -0.27
ATXN3-253ENST00000621269 C3orf79P0CE67 100 aa13.38□□□□□ -0.27
ATXN3-253ENST00000621269 TTTY13Q9BZ97 58 aa13.38□□□□□ -0.27
ATXN3-253ENST00000621269 KRTAP9-2Q9BYQ4 174 aa13.37□□□□□ -0.27
ATXN3-253ENST00000621269 SPRR1BP22528 89 aa13.36□□□□□ -0.27
ATXN3-253ENST00000621269 COX7BP24311 80 aa13.35□□□□□ -0.27
ATXN3-253ENST00000621269 KRTDAPP60985 99 aa13.35□□□□□ -0.27
ATXN3-253ENST00000621269 LAMTOR3Q9UHA4 124 aa13.35□□□□□ -0.27
ATXN3-253ENST00000621269 ELOF1P60002 83 aaKnown RBP13.33□□□□□ -0.28
ATXN3-253ENST00000621269 C6orf99Q4VX62 202 aa13.33□□□□□ -0.28
ATXN3-253ENST00000621269 SCGB1D4Q6XE38 83 aa13.33□□□□□ -0.28
ATXN3-253ENST00000621269 LIMD2Q9BT23 127 aa13.32□□□□□ -0.28
ATXN3-253ENST00000621269 HRCT1Q6UXD1 115 aa13.31□□□□□ -0.28
ATXN3-253ENST00000621269 C20orf202A1L168 122 aa13.3□□□□□ -0.28
ATXN3-253ENST00000621269 TAL2Q16559 108 aa13.3□□□□□ -0.28
ATXN3-253ENST00000621269 COPS9Q8WXC6 57 aa13.3□□□□□ -0.28
ATXN3-253ENST00000621269 COA6Q5JTJ3 125 aaKnown RBP13.29□□□□□ -0.28
ATXN3-253ENST00000621269 XP32Q5T750 250 aa13.29□□□□□ -0.28
ATXN3-253ENST00000621269 DEFB105AQ8NG35 78 aa13.28□□□□□ -0.28
ATXN3-253ENST00000621269 KRTAP4-1Q9BYQ7 146 aa13.27□□□□□ -0.29
ATXN3-253ENST00000621269 TRBV7-6A0A0J9YX20 115 aa13.26□□□□□ -0.29
ATXN3-253ENST00000621269 LINC01547P58512 204 aaPredicted RBP13.26□□□□□ -0.29
ATXN3-253ENST00000621269 IFITM1P13164 125 aa13.25□□□□□ -0.29
ATXN3-253ENST00000621269 TEX49A0A1B0GTD5 131 aa13.24□□□□□ -0.29
ATXN3-253ENST00000621269 A6NDN8 102 aa13.24□□□□□ -0.29
ATXN3-253ENST00000621269 Q1RN00 199 aa13.24□□□□□ -0.29
ATXN3-253ENST00000621269 ANKRD39Q53RE8 183 aa13.24□□□□□ -0.29
ATXN3-253ENST00000621269 Q6ZVH6 145 aa13.22□□□□□ -0.29
ATXN3-253ENST00000621269 ATOH7Q8N100 152 aa13.22□□□□□ -0.29
ATXN3-253ENST00000621269 PRO1933Q9H354 126 aa13.22□□□□□ -0.29
ATXN3-253ENST00000621269 A0A1B0GWB2 263 aa13.21□□□□□ -0.29
ATXN3-253ENST00000621269 AKR1D1P51857 326 aa13.2□□□□□ -0.3
ATXN3-253ENST00000621269 CD164Q04900 197 aa13.2□□□□□ -0.3
ATXN3-253ENST00000621269 MUSTN1Q8IVN3 82 aa13.19□□□□□ -0.3
ATXN3-253ENST00000621269 H7C2G1 150 aa13.17□□□□□ -0.3
ATXN3-253ENST00000621269 PCP2Q8IVA1 136 aa13.17□□□□□ -0.3
ATXN3-253ENST00000621269 A4D1N5 150 aa13.15□□□□□ -0.3
ATXN3-253ENST00000621269 C9orf92A6NGG3 77 aa13.14□□□□□ -0.31
ATXN3-253ENST00000621269 SMIM29Q86T20 159 aa13.14□□□□□ -0.31
ATXN3-253ENST00000621269 IGLV5-48A0A075B6I7 105 aa13.13□□□□□ -0.31
ATXN3-253ENST00000621269 TRAV13-2A0A0B4J235 113 aa13.13□□□□□ -0.31
ATXN3-253ENST00000621269 SNRPEP62304 92 aaKnown RBP13.12□□□□□ -0.31
ATXN3-253ENST00000621269 NHP2Q9NX24 153 aaKnown RBP13.12□□□□□ -0.31
ATXN3-253ENST00000621269 SMIM11BQ8TCY0 68 aa13.09□□□□□ -0.31
ATXN3-253ENST00000621269 Q5XG85 94 aa13.08□□□□□ -0.32
ATXN3-253ENST00000621269 PCOTHQ58A44 107 aa13.07□□□□□ -0.32
ATXN3-253ENST00000621269 A0A0G2JQZ4 141 aa13.04□□□□□ -0.32
ATXN3-253ENST00000621269 VAMP3Q15836 100 aa13.04□□□□□ -0.32
ATXN3-253ENST00000621269 IGLV8-61A0A075B6I0 122 aa13.03□□□□□ -0.32
ATXN3-253ENST00000621269 C1orf195Q5TG92 126 aa13.03□□□□□ -0.32
ATXN3-253ENST00000621269 HSBP1L1C9JCN9 74 aa13.01□□□□□ -0.33
ATXN3-253ENST00000621269 S100A2P29034 98 aa13.01□□□□□ -0.33
ATXN3-253ENST00000621269 F8WEM9 126 aa12.99□□□□□ -0.33
ATXN3-253ENST00000621269 KRTAP9-6A0A140TA67 174 aa12.98□□□□□ -0.33
ATXN3-253ENST00000621269 HIST3H2BBQ8N257 126 aa12.98□□□□□ -0.33
ATXN3-253ENST00000621269 TCL1BO95988 128 aa12.97□□□□□ -0.33
ATXN3-253ENST00000621269 HIST1H2BLQ99880 126 aa12.97□□□□□ -0.33
ATXN3-253ENST00000621269 LCE2CQ5TA81 110 aa12.96□□□□□ -0.33
ATXN3-253ENST00000621269 LINC00575Q6W349 94 aa12.96□□□□□ -0.33
ATXN3-253ENST00000621269 hADV29S1A0JD25 119 aa12.93□□□□□ -0.34
ATXN3-253ENST00000621269 Q6ZQY7 126 aa12.92□□□□□ -0.34
ATXN3-253ENST00000621269 KRTAP19-2Q3LHN2 52 aa12.89□□□□□ -0.35
ATXN3-253ENST00000621269 S100A6P06703 90 aa12.88□□□□□ -0.35
ATXN3-253ENST00000621269 Q6JHZ5 121 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms