RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 A0A1W2PNN7 141 aa6.62□□□□□ -1.35
COL4A6-210ENST00000621266 EPG5Q9HCE0 2579 aa6.62□□□□□ -1.35
COL4A6-210ENST00000621266 WIPF1O43516 503 aa6.61□□□□□ -1.35
COL4A6-210ENST00000621266 C8orf17Q9NRJ1 99 aa6.61□□□□□ -1.35
COL4A6-210ENST00000621266 KRTAP10-11P60412 298 aa6.61□□□□□ -1.35
COL4A6-210ENST00000621266 IGFL1Q6UW32 110 aa6.61□□□□□ -1.35
COL4A6-210ENST00000621266 LUZP6Q538Z0 58 aa6.6□□□□□ -1.35
COL4A6-210ENST00000621266 RTL8CO15255 209 aa6.6□□□□□ -1.35
COL4A6-210ENST00000621266 ACANP16112 2415 aa6.59□□□□□ -1.35
COL4A6-210ENST00000621266 ANKRD17O75179 2603 aaKnown RBP6.59□□□□□ -1.35
COL4A6-210ENST00000621266 H3BNG1 76 aa6.56□□□□□ -1.36
COL4A6-210ENST00000621266 K7EIL1 84 aa6.55□□□□□ -1.36
COL4A6-210ENST00000621266 A0A1B0GVX0 72 aa6.55□□□□□ -1.36
COL4A6-210ENST00000621266 Q1T7F1 81 aa6.55□□□□□ -1.36
COL4A6-210ENST00000621266 KLK9Q2XQG4 91 aa6.55□□□□□ -1.36
COL4A6-210ENST00000621266 IGLV1-50A0A075B6I6 118 aa6.55□□□□□ -1.36
COL4A6-210ENST00000621266 GVQW2A0A096LPI5 108 aaPredicted RBP6.55□□□□□ -1.36
COL4A6-210ENST00000621266 NBDYA0A0U1RRE5 68 aa6.55□□□□□ -1.36
COL4A6-210ENST00000621266 KRTAP10-3P60369 221 aa6.54□□□□□ -1.36
COL4A6-210ENST00000621266 PRAC1Q96KF2 57 aa6.54□□□□□ -1.36
COL4A6-210ENST00000621266 LINC00528Q8N1L1 170 aa6.54□□□□□ -1.36
COL4A6-210ENST00000621266 OBSCN-AS1Q96MR7 158 aa6.54□□□□□ -1.36
COL4A6-210ENST00000621266 Q8N377 158 aa6.54□□□□□ -1.36
COL4A6-210ENST00000621266 FAM104AQ969W3 186 aa6.53□□□□□ -1.36
COL4A6-210ENST00000621266 C9orf92A6NGG3 77 aa6.53□□□□□ -1.36
COL4A6-210ENST00000621266 SMR3BP02814 79 aaPredicted RBP6.52□□□□□ -1.37
COL4A6-210ENST00000621266 KCNQ1DNQ9H478 68 aa6.52□□□□□ -1.37
COL4A6-210ENST00000621266 SPANXA2-OT1Q8N9U9 137 aa6.52□□□□□ -1.37
COL4A6-210ENST00000621266 Q8N1X5 172 aa6.51□□□□□ -1.37
COL4A6-210ENST00000621266 LINC00588Q9Y4M8 146 aa6.51□□□□□ -1.37
COL4A6-210ENST00000621266 C9orf163Q8N9P6 203 aa6.51□□□□□ -1.37
COL4A6-210ENST00000621266 FAM229BQ4G0N7 80 aa6.5□□□□□ -1.37
COL4A6-210ENST00000621266 Q5XG85 94 aa6.5□□□□□ -1.37
COL4A6-210ENST00000621266 F8P00451 2351 aa6.5□□□□□ -1.37
COL4A6-210ENST00000621266 Q8NAQ8 132 aa6.5□□□□□ -1.37
COL4A6-210ENST00000621266 PRR26Q8N8Z3 221 aa6.49□□□□□ -1.37
COL4A6-210ENST00000621266 IGLV5-48A0A075B6I7 105 aa6.48□□□□□ -1.37
COL4A6-210ENST00000621266 FLNBO75369 2602 aaKnown RBP6.47□□□□□ -1.37
COL4A6-210ENST00000621266 DNAH12Q6ZR08 3092 aa6.47□□□□□ -1.37
COL4A6-210ENST00000621266 COX6B2Q6YFQ2 88 aa6.46□□□□□ -1.38
COL4A6-210ENST00000621266 ZNF575Q86XF7 245 aa6.46□□□□□ -1.38
COL4A6-210ENST00000621266 ANAPC11Q9NYG5 84 aa6.45□□□□□ -1.38
COL4A6-210ENST00000621266 Q75L30 129 aa6.45□□□□□ -1.38
COL4A6-210ENST00000621266 DNAH10OSP0CZ25 163 aa6.45□□□□□ -1.38
COL4A6-210ENST00000621266 A0A096LNT2 108 aa6.44□□□□□ -1.38
COL4A6-210ENST00000621266 CSAG1Q6PB30 78 aa6.44□□□□□ -1.38
COL4A6-210ENST00000621266 A0A1W2PNM2 257 aa6.43□□□□□ -1.38
COL4A6-210ENST00000621266 OCR1Q9BZK8 76 aa6.43□□□□□ -1.38
COL4A6-210ENST00000621266 IGLV5-37A0A075B6J1 123 aa6.42□□□□□ -1.38
COL4A6-210ENST00000621266 HECTD1Q9ULT8 2610 aa6.42□□□□□ -1.38
COL4A6-210ENST00000621266 C15orf56Q8N910 161 aa6.41□□□□□ -1.38
COL4A6-210ENST00000621266 A0A0A0MQY5 61 aa6.41□□□□□ -1.38
COL4A6-210ENST00000621266 FP248Q71RG6 208 aaPredicted RBP6.4□□□□□ -1.38
COL4A6-210ENST00000621266 CYSTM1Q9H1C7 97 aa6.4□□□□□ -1.39
COL4A6-210ENST00000621266 KRTAP1-3Q8IUG1 177 aa6.4□□□□□ -1.39
COL4A6-210ENST00000621266 CSNK1G2-AS1Q8NCQ2 148 aa6.39□□□□□ -1.39
COL4A6-210ENST00000621266 LINC00304Q8N9R0 145 aa6.39□□□□□ -1.39
COL4A6-210ENST00000621266 A0A1B0GU33 70 aa6.38□□□□□ -1.39
COL4A6-210ENST00000621266 C5orf42Q9H799 3197 aa6.37□□□□□ -1.39
COL4A6-210ENST00000621266 ZNF861PO60384 105 aa6.36□□□□□ -1.39
COL4A6-210ENST00000621266 PRRC2CQ9Y520 2896 aaKnown RBP6.36□□□□□ -1.39
COL4A6-210ENST00000621266 IGLV7-46A0A075B6I9 117 aa6.36□□□□□ -1.39
COL4A6-210ENST00000621266 LINC00483Q53H64 154 aa6.36□□□□□ -1.39
COL4A6-210ENST00000621266 Q8N9P0 234 aaPredicted RBP6.35□□□□□ -1.39
COL4A6-210ENST00000621266 Q5VV11 94 aa6.35□□□□□ -1.39
COL4A6-210ENST00000621266 C19orf73Q9NVV2 129 aa6.35□□□□□ -1.39
COL4A6-210ENST00000621266 LINC01558Q9Y6Z2 57 aa6.33□□□□□ -1.4
COL4A6-210ENST00000621266 SPINK7P58062 85 aa6.33□□□□□ -1.4
COL4A6-210ENST00000621266 KRTAP1-1Q07627 177 aa6.32□□□□□ -1.4
COL4A6-210ENST00000621266 PRR34Q9NV39 138 aa6.32□□□□□ -1.4
COL4A6-210ENST00000621266 GIG44P09565 113 aaPredicted RBP6.31□□□□□ -1.4
COL4A6-210ENST00000621266 HRES1P13985 223 aa6.31□□□□□ -1.4
COL4A6-210ENST00000621266 PLA2G2DQ9UNK4 145 aa6.31□□□□□ -1.4
COL4A6-210ENST00000621266 MGAM2Q2M2H8 2515 aa6.3□□□□□ -1.4
COL4A6-210ENST00000621266 CASC10Q5T4H9 136 aa6.3□□□□□ -1.4
COL4A6-210ENST00000621266 DMAC1Q96GE9 116 aa6.3□□□□□ -1.4
COL4A6-210ENST00000621266 PCNTO95613 3336 aa6.3□□□□□ -1.4
COL4A6-210ENST00000621266 CAMK2N1Q7Z7J9 78 aa6.3□□□□□ -1.4
COL4A6-210ENST00000621266 SPRR4Q96PI1 79 aa6.3□□□□□ -1.4
COL4A6-210ENST00000621266 LINC00612Q8N6U2 182 aa6.29□□□□□ -1.4
COL4A6-210ENST00000621266 A0A087WTM6 91 aa6.28□□□□□ -1.4
COL4A6-210ENST00000621266 TLX1NBP0CAT3 122 aa6.28□□□□□ -1.4
COL4A6-210ENST00000621266 USP24Q9UPU5 2620 aa6.28□□□□□ -1.4
COL4A6-210ENST00000621266 CNBPP62633 177 aaKnown RBP6.27□□□□□ -1.41
COL4A6-210ENST00000621266 OXTP01178 125 aa6.27□□□□□ -1.41
COL4A6-210ENST00000621266 PSORS1C2Q9UIG4 136 aa6.26□□□□□ -1.41
COL4A6-210ENST00000621266 IGLV7-43P04211 117 aa6.26□□□□□ -1.41
COL4A6-210ENST00000621266 CEP350Q5VT06 3117 aa6.24□□□□□ -1.41
COL4A6-210ENST00000621266 FLNAP21333 2647 aaKnown RBP6.22□□□□□ -1.41
COL4A6-210ENST00000621266 HELZ2Q9BYK8 2649 aaKnown RBP6.22□□□□□ -1.41
COL4A6-210ENST00000621266 TNP2Q05952 138 aa6.21□□□□□ -1.42
COL4A6-210ENST00000621266 CR1P17927 2039 aa6.2□□□□□ -1.42
COL4A6-210ENST00000621266 CHD7Q9P2D1 2997 aa6.19□□□□□ -1.42
COL4A6-210ENST00000621266 M0R2T5 61 aa6.19□□□□□ -1.42
COL4A6-210ENST00000621266 ITPR3Q14573 2671 aa6.19□□□□□ -1.42
COL4A6-210ENST00000621266 KRTAP16-1A8MUX0 517 aa6.18□□□□□ -1.42
COL4A6-210ENST00000621266 MMP24-AS1A0A0U1RRL7 71 aa6.18□□□□□ -1.42
COL4A6-210ENST00000621266 MAST4O15021 2626 aa6.17□□□□□ -1.42
COL4A6-210ENST00000621266 ATRQ13535 2644 aa6.16□□□□□ -1.42
COL4A6-210ENST00000621266 ROMO1P60602 79 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms