RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 SPANXB1Q9NS25 103 aaPredicted RBP12.76□□□□□ -0.37
SYNGR3-206ENST00000618464 TRBV10-2A0A0K0K1G8 114 aa12.75□□□□□ -0.37
SYNGR3-206ENST00000618464 SOSTDC1Q6X4U4 206 aa12.74□□□□□ -0.37
SYNGR3-206ENST00000618464 TTTY13Q9BZ97 58 aa12.74□□□□□ -0.37
SYNGR3-206ENST00000618464 B5MCH6 92 aa12.73□□□□□ -0.37
SYNGR3-206ENST00000618464 EIF4EBP3O60516 100 aaPredicted RBP12.73□□□□□ -0.37
SYNGR3-206ENST00000618464 ADAMTSL4-AS1Q5T5F5 129 aa12.73□□□□□ -0.37
SYNGR3-206ENST00000618464 S100A7L2Q5SY68 101 aa12.72□□□□□ -0.37
SYNGR3-206ENST00000618464 SCGB1D4Q6XE38 83 aa12.72□□□□□ -0.37
SYNGR3-206ENST00000618464 NDUFC2O95298 119 aa12.71□□□□□ -0.37
SYNGR3-206ENST00000618464 TIMM17BO60830 172 aa12.7□□□□□ -0.38
SYNGR3-206ENST00000618464 TMA7Q9Y2S6 64 aaKnown RBP12.7□□□□□ -0.38
SYNGR3-206ENST00000618464 ERC2-IT1O76042 136 aa12.69□□□□□ -0.38
SYNGR3-206ENST00000618464 IGLV6-57P01721 117 aa12.68□□□□□ -0.38
SYNGR3-206ENST00000618464 GAGE2AQ6NT46 116 aa12.68□□□□□ -0.38
SYNGR3-206ENST00000618464 PCP2Q8IVA1 136 aa12.67□□□□□ -0.38
SYNGR3-206ENST00000618464 Q8NBF4 154 aa12.67□□□□□ -0.38
SYNGR3-206ENST00000618464 Q9BRP9 147 aa12.67□□□□□ -0.38
SYNGR3-206ENST00000618464 TRAV23DV6A0A075B6W5 121 aa12.66□□□□□ -0.38
SYNGR3-206ENST00000618464 LINC00483Q53H64 154 aa12.66□□□□□ -0.38
SYNGR3-206ENST00000618464 C4orf48Q5BLP8 95 aa12.66□□□□□ -0.38
SYNGR3-206ENST00000618464 SPAG11AQ6PDA7 123 aa12.66□□□□□ -0.38
SYNGR3-206ENST00000618464 Q6ZRX8 168 aa12.66□□□□□ -0.38
SYNGR3-206ENST00000618464 LITAFQ99732 161 aa12.66□□□□□ -0.38
SYNGR3-206ENST00000618464 IGLV7-46A0A075B6I9 117 aa12.65□□□□□ -0.38
SYNGR3-206ENST00000618464 CTAG1AP78358 180 aa12.65□□□□□ -0.38
SYNGR3-206ENST00000618464 LINC00308Q8TCZ7 52 aa12.64□□□□□ -0.39
SYNGR3-206ENST00000618464 IGLV9-49A0A0B4J1Y8 123 aa12.61□□□□□ -0.39
SYNGR3-206ENST00000618464 ZNF73O43830 326 aaPredicted RBP12.61□□□□□ -0.39
SYNGR3-206ENST00000618464 MOBPQ13875 183 aa12.61□□□□□ -0.39
SYNGR3-206ENST00000618464 COPS9Q8WXC6 57 aa12.6□□□□□ -0.39
SYNGR3-206ENST00000618464 JOSD1Q15040 202 aaPredicted RBP12.59□□□□□ -0.39
SYNGR3-206ENST00000618464 TPRXLQ17RH7 258 aa12.59□□□□□ -0.39
SYNGR3-206ENST00000618464 OR13C6PQ8NH95 151 aa12.59□□□□□ -0.39
SYNGR3-206ENST00000618464 SPANXDQ9BXN6 97 aa12.59□□□□□ -0.39
SYNGR3-206ENST00000618464 CDIP1Q9H305 208 aa12.59□□□□□ -0.39
SYNGR3-206ENST00000618464 SPANXCQ9NY87 97 aa12.59□□□□□ -0.39
SYNGR3-206ENST00000618464 A0A0U1RQV1 116 aa12.58□□□□□ -0.4
SYNGR3-206ENST00000618464 Q6ZVH6 145 aa12.57□□□□□ -0.4
SYNGR3-206ENST00000618464 IFITM1P13164 125 aa12.56□□□□□ -0.4
SYNGR3-206ENST00000618464 FAT4Q6V0I7 4981 aa12.55□□□□□ -0.4
SYNGR3-206ENST00000618464 SPINK1P00995 79 aa12.54□□□□□ -0.4
SYNGR3-206ENST00000618464 ST20-AS1Q8NBB2 130 aa12.54□□□□□ -0.4
SYNGR3-206ENST00000618464 VAMP8Q9BV40 100 aa12.54□□□□□ -0.4
SYNGR3-206ENST00000618464 CBY1Q9Y3M2 126 aa12.54□□□□□ -0.4
SYNGR3-206ENST00000618464 MUC17Q685J3 4493 aa12.53□□□□□ -0.4
SYNGR3-206ENST00000618464 HINT1P49773 126 aaPredicted RBP12.53□□□□□ -0.4
SYNGR3-206ENST00000618464 LINC00518Q8N0U6 118 aa12.53□□□□□ -0.4
SYNGR3-206ENST00000618464 PAM16Q9Y3D7 125 aa12.53□□□□□ -0.4
SYNGR3-206ENST00000618464 SPATA45Q537H7 98 aa12.52□□□□□ -0.41
SYNGR3-206ENST00000618464 MUSTN1Q8IVN3 82 aa12.52□□□□□ -0.41
SYNGR3-206ENST00000618464 COX8AP10176 69 aa12.51□□□□□ -0.41
SYNGR3-206ENST00000618464 C9orf153Q5TBE3 101 aa12.51□□□□□ -0.41
SYNGR3-206ENST00000618464 FP248Q71RG6 208 aaPredicted RBP12.51□□□□□ -0.41
SYNGR3-206ENST00000618464 SSBP3-AS1Q7Z2R9 100 aa12.51□□□□□ -0.41
SYNGR3-206ENST00000618464 LCE2AQ5TA79 106 aaPredicted RBP12.49□□□□□ -0.41
SYNGR3-206ENST00000618464 C14orf144Q96I85 54 aa12.48□□□□□ -0.41
SYNGR3-206ENST00000618464 KRTAP9-2Q9BYQ4 174 aa12.47□□□□□ -0.41
SYNGR3-206ENST00000618464 DLEU1O43261 78 aa12.46□□□□□ -0.41
SYNGR3-206ENST00000618464 PYY3Q5JQD4 70 aa12.45□□□□□ -0.42
SYNGR3-206ENST00000618464 C6orf99Q4VX62 202 aa12.44□□□□□ -0.42
SYNGR3-206ENST00000618464 DHRS4-AS1Q9P1J3 65 aa12.44□□□□□ -0.42
SYNGR3-206ENST00000618464 A6NDN8 102 aa12.43□□□□□ -0.42
SYNGR3-206ENST00000618464 COX7BP24311 80 aa12.43□□□□□ -0.42
SYNGR3-206ENST00000618464 SLC25A34Q6PIV7 304 aa12.43□□□□□ -0.42
SYNGR3-206ENST00000618464 Q8N377 158 aa12.43□□□□□ -0.42
SYNGR3-206ENST00000618464 HIST1H4GQ99525 98 aa12.43□□□□□ -0.42
SYNGR3-206ENST00000618464 ELOF1P60002 83 aaKnown RBP12.41□□□□□ -0.42
SYNGR3-206ENST00000618464 RPS29P62273 56 aaKnown RBP12.41□□□□□ -0.42
SYNGR3-206ENST00000618464 KRTAP13-3Q3SY46 172 aa12.41□□□□□ -0.42
SYNGR3-206ENST00000618464 TRAV13-2A0A0B4J235 113 aa12.39□□□□□ -0.43
SYNGR3-206ENST00000618464 SLC25A20O43772 301 aa12.38□□□□□ -0.43
SYNGR3-206ENST00000618464 SPRR1BP22528 89 aa12.37□□□□□ -0.43
SYNGR3-206ENST00000618464 A4D1N5 150 aa12.36□□□□□ -0.43
SYNGR3-206ENST00000618464 DEFB105AQ8NG35 78 aa12.36□□□□□ -0.43
SYNGR3-206ENST00000618464 HIGD1BQ9P298 99 aa12.36□□□□□ -0.43
SYNGR3-206ENST00000618464 TAL2Q16559 108 aa12.34□□□□□ -0.43
SYNGR3-206ENST00000618464 HRCT1Q6UXD1 115 aa12.34□□□□□ -0.43
SYNGR3-206ENST00000618464 LAMTOR3Q9UHA4 124 aa12.34□□□□□ -0.43
SYNGR3-206ENST00000618464 Q1RN00 199 aa12.32□□□□□ -0.44
SYNGR3-206ENST00000618464 TRBV7-6A0A0J9YX20 115 aa12.31□□□□□ -0.44
SYNGR3-206ENST00000618464 C2orf91Q6ZV80 131 aa12.31□□□□□ -0.44
SYNGR3-206ENST00000618464 A0A1B0GWB2 263 aa12.3□□□□□ -0.44
SYNGR3-206ENST00000618464 C12orf57Q99622 126 aa12.3□□□□□ -0.44
SYNGR3-206ENST00000618464 TEX49A0A1B0GTD5 131 aa12.27□□□□□ -0.45
SYNGR3-206ENST00000618464 SMIM11BQ8TCY0 68 aa12.27□□□□□ -0.45
SYNGR3-206ENST00000618464 ASB16-AS1Q495Z4 193 aa12.25□□□□□ -0.45
SYNGR3-206ENST00000618464 LIMD2Q9BT23 127 aa12.25□□□□□ -0.45
SYNGR3-206ENST00000618464 VAMP3Q15836 100 aa12.24□□□□□ -0.45
SYNGR3-206ENST00000618464 CEND1Q8N111 149 aa12.24□□□□□ -0.45
SYNGR3-206ENST00000618464 RAB37Q96AX2 223 aa12.24□□□□□ -0.45
SYNGR3-206ENST00000618464 UQCR10Q9UDW1 63 aa12.24□□□□□ -0.45
SYNGR3-206ENST00000618464 TMEM238LA0A1B0GVL6 79 aa12.22□□□□□ -0.45
SYNGR3-206ENST00000618464 A6NJY4 79 aa12.22□□□□□ -0.45
SYNGR3-206ENST00000618464 LINC01547P58512 204 aaPredicted RBP12.22□□□□□ -0.45
SYNGR3-206ENST00000618464 SMIM29Q86T20 159 aa12.22□□□□□ -0.45
SYNGR3-206ENST00000618464 PRO1933Q9H354 126 aa12.22□□□□□ -0.45
SYNGR3-206ENST00000618464 IGLV5-48A0A075B6I7 105 aa12.2□□□□□ -0.46
SYNGR3-206ENST00000618464 CFC1BP0CG36 223 aa12.2□□□□□ -0.46
SYNGR3-206ENST00000618464 CFC1P0CG37 223 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms